Trace number 1775122

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds. The first timestamp (if present) is estimated CPU time. The last timestamp is wall clock time.

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerCPU timeWall clock time
MiniSat 2.1 (Sat-race'08 Edition)SAT 19.0111 19.0209

General information on the benchmark

NameAPPLICATIONS/satComp09_BioInstances/
ndhf_xits_20_SAT.cnf
MD5SUM8aa38136187abb1238dedfc85e88a72c
Bench CategoryAPPLICATION (applications instances)
Best result obtained on this benchmarkSAT
Best CPU time to get the best result obtained on this benchmark19.0111
Satisfiable
(Un)Satisfiability was proved
Number of variables4242
Number of clauses503783
Sum of the clauses size1505427
Maximum clause length21
Minimum clause length2
Number of clauses of size 10
Number of clauses of size 26480
Number of clauses of size 3497272
Number of clauses of size 40
Number of clauses of size 50
Number of clauses of size over 531

Solver Data

0.00/0.00	c WARNING: for repeatability, setting FPU to use double precision
0.00/0.00	c ============================[ Problem Statistics ]=============================
0.00/0.00	c |                                                                             |
0.39/0.41	c |  Number of variables:          4242                                         |
0.39/0.41	c |  Number of clauses:          503783                                         |
0.39/0.41	c |  Parse time:                   0.38 s                                       |
16.68/16.74	c |  Simplification time:         16.31 s                                       |
16.68/16.74	c |                                                                             |
16.68/16.74	c ============================[ Search Statistics ]==============================
16.68/16.74	c | Conflicts |          ORIGINAL         |          LEARNT          | Progress |
16.68/16.74	c |           |    Vars  Clauses Literals |    Limit  Clauses Lit/Cl |          |
16.68/16.74	c ===============================================================================
16.68/16.75	c |       100 |    2970   494078  1477307 |   181161      100     71 |  0.000 % |
16.68/16.76	c |       250 |    2970   494078  1477307 |   199278      250     81 |  0.000 % |
16.68/16.78	c |       475 |    2970   494078  1477307 |   219205      475     90 |  0.000 % |
16.78/16.81	c |       812 |    2970   494078  1477307 |   241126      812     97 |  0.000 % |
16.78/16.85	c |      1318 |    2970   494078  1477307 |   265239     1318     98 |  0.000 % |
16.89/16.93	c |      2077 |    2970   494078  1477307 |   291763     2077    103 |  0.000 % |
16.99/17.04	c |      3216 |    2970   494078  1477307 |   320939     3216    117 |  0.000 % |
17.19/17.22	c |      4924 |    2970   494078  1477307 |   353033     4924    113 |  0.000 % |
17.38/17.48	c |      7486 |    2970   494078  1477307 |   388336     7486    118 |  0.000 % |
17.98/18.02	c |     11330 |    2970   494078  1477307 |   427170    11330    128 |  0.000 % |
18.69/18.77	c |     17096 |    2970   494078  1477307 |   469887    17096    127 |  0.000 % |
18.98/19.01	c ===============================================================================
18.98/19.01	c restarts              : 63
18.98/19.01	c conflicts             : 19189          (1013 /sec)
18.98/19.01	c decisions             : 43416          (2292 /sec)
18.98/19.01	c propagations          : 1418494        (74894 /sec)
18.98/19.01	c conflict literals     : 2429610        (4.02 % deleted)
18.98/19.01	c Memory used           : 39.68 MB
18.98/19.01	c CPU time              : 18.9401 s
18.98/19.01	c 
18.98/19.01	s SATISFIABLE
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Verifier Data

OK

Watcher Data

runsolver version 3.2.9 (svn:492) (c) roussel@cril.univ-artois.fr

command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-1775122-1241223450/watcher-1775122-1241223450 -o /tmp/evaluation-result-1775122-1241223450/solver-1775122-1241223450 -C 10000 -W 12000 -M 1800 HOME/minisat HOME/instance-1775122-1241223450.cnf 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 10000 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 10030 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 12000 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 32260
/proc/meminfo: memFree=1960160/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=7652 CPUtime=0
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 435 0 0 0 0 0 0 0 18 0 1 0 150372797 7835648 419 1992294400 4194304 5092341 548682068848 18446744073709551615 4515195 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 1913 419 63 219 0 1691 0

[startup+0.080477 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 32260
/proc/meminfo: memFree=1960160/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=11840 CPUtime=0.07
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 2008 0 0 0 7 0 0 0 18 0 1 0 150372797 12124160 1890 1992294400 4194304 5092341 548682068848 18446744073709551615 4270144 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 2960 1891 63 219 0 2738 0
Current children cumulated CPU time (s) 0.07
Current children cumulated vsize (KiB) 11840

[startup+0.102478 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 32260
/proc/meminfo: memFree=1960160/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=12992 CPUtime=0.09
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 2492 0 0 0 9 0 0 0 18 0 1 0 150372797 13303808 2283 1992294400 4194304 5092341 548682068848 18446744073709551615 4197813 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 3248 2284 63 219 0 3026 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 12992

[startup+0.301496 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 32260
/proc/meminfo: memFree=1960160/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=26584 CPUtime=0.29
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 6991 0 0 0 27 2 0 0 19 0 1 0 150372797 27222016 6139 1992294400 4194304 5092341 548682068848 18446744073709551615 4270144 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 6646 6139 63 219 0 6424 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 26584

[startup+0.701533 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 32260
/proc/meminfo: memFree=1960160/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=37520 CPUtime=0.69
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 9835 0 0 0 66 3 0 0 22 0 1 0 150372797 38420480 8527 1992294400 4194304 5092341 548682068848 18446744073709551615 4219532 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 9380 8527 86 219 0 9158 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 37520

[startup+1.50161 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1926232/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=37520 CPUtime=1.49
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 9835 0 0 0 146 3 0 0 25 0 1 0 150372797 38420480 8527 1992294400 4194304 5092341 548682068848 18446744073709551615 4219753 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 9380 8527 86 219 0 9158 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 37520

[startup+3.10176 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1926104/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=37520 CPUtime=3.09
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 9836 0 0 0 306 3 0 0 25 0 1 0 150372797 38420480 8528 1992294400 4194304 5092341 548682068848 18446744073709551615 4219912 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 9380 8528 87 219 0 9158 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 37520

[startup+6.30105 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1925912/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=37520 CPUtime=6.29
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 9836 0 0 0 625 4 0 0 25 0 1 0 150372797 38420480 8528 1992294400 4194304 5092341 548682068848 18446744073709551615 4219729 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 9380 8528 87 219 0 9158 0
Current children cumulated CPU time (s) 6.29
Current children cumulated vsize (KiB) 37520

[startup+12.7016 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1925848/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=37520 CPUtime=12.69
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 9882 0 0 0 1265 4 0 0 25 0 1 0 150372797 38420480 8574 1992294400 4194304 5092341 548682068848 18446744073709551615 4219938 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 9380 8574 87 219 0 9158 0
Current children cumulated CPU time (s) 12.69
Current children cumulated vsize (KiB) 37520

Solver just ended. Dumping a history of the last processes samples

[startup+15.9019 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1925848/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=37520 CPUtime=15.88
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 9882 0 0 0 1584 4 0 0 25 0 1 0 150372797 38420480 8574 1992294400 4194304 5092341 548682068848 18446744073709551615 4219767 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 9380 8574 87 219 0 9158 0
Current children cumulated CPU time (s) 15.88
Current children cumulated vsize (KiB) 37520

[startup+17.5011 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1927128/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=34784 CPUtime=17.49
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 12739 0 0 0 1744 5 0 0 25 0 1 0 150372797 35618816 8267 1992294400 4194304 5092341 548682068848 18446744073709551615 4265869 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 8696 8267 102 219 0 8474 0
Current children cumulated CPU time (s) 17.49
Current children cumulated vsize (KiB) 34784

[startup+18.3012 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1927128/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=40624 CPUtime=18.28
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 13476 0 0 0 1823 5 0 0 25 0 1 0 150372797 41598976 9004 1992294400 4194304 5092341 548682068848 18446744073709551615 4240947 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 10156 9004 102 219 0 9934 0
Current children cumulated CPU time (s) 18.28
Current children cumulated vsize (KiB) 40624

[startup+18.7052 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1922776/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=40624 CPUtime=18.69
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 13907 0 0 0 1863 6 0 0 25 0 1 0 150372797 41598976 9435 1992294400 4194304 5092341 548682068848 18446744073709551615 4241101 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 10156 9435 102 219 0 9934 0
Current children cumulated CPU time (s) 18.69
Current children cumulated vsize (KiB) 40624

[startup+18.9012 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1922776/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=40624 CPUtime=18.89
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 14131 0 0 0 1883 6 0 0 25 0 1 0 150372797 41598976 9659 1992294400 4194304 5092341 548682068848 18446744073709551615 4241934 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 10156 9659 102 219 0 9934 0
Current children cumulated CPU time (s) 18.89
Current children cumulated vsize (KiB) 40624

[startup+19.0012 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 32261
/proc/meminfo: memFree=1922776/2055920 swapFree=4181312/4192956
[pid=32260] ppid=32258 vsize=40624 CPUtime=18.98
/proc/32260/stat : 32260 (minisat) R 32258 32260 32133 0 -1 4194304 14234 0 0 0 1892 6 0 0 25 0 1 0 150372797 41598976 9762 1992294400 4194304 5092341 548682068848 18446744073709551615 4240640 0 0 4096 3 0 0 0 17 1 0 0
/proc/32260/statm: 10156 9762 102 219 0 9934 0
Current children cumulated CPU time (s) 18.98
Current children cumulated vsize (KiB) 40624

Child status: 10
Real time (s): 19.0209
CPU time (s): 19.0111
CPU user time (s): 18.9411
CPU system time (s): 0.069989
CPU usage (%): 99.9486
Max. virtual memory (cumulated for all children) (KiB): 42572

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 18.9411
system time used= 0.069989
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 14248
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 2
involuntary context switches= 49

runsolver used 0.016997 second user time and 0.046992 second system time

The end

Launcher Data

Begin job on node48 at 2009-05-02 02:17:31
IDJOB=1775122
IDBENCH=71090
IDSOLVER=608
FILE ID=node48/1775122-1241223450
PBS_JOBID= 9224762
Free space on /tmp= 66388 MiB

SOLVER NAME= MiniSat 2.1 (Sat-race'08 Edition)
BENCH NAME= SAT09/APPLICATIONS/satComp09_BioInstances/ndhf_xits_20_SAT.cnf
COMMAND LINE= HOME/minisat BENCHNAME
RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-1775122-1241223450/watcher-1775122-1241223450 -o /tmp/evaluation-result-1775122-1241223450/solver-1775122-1241223450 -C 10000 -W 12000 -M 1800  HOME/minisat HOME/instance-1775122-1241223450.cnf

TIME LIMIT= 10000 seconds
MEMORY LIMIT= 1800 MiB
MAX NB THREAD= 0

MD5SUM BENCH= 8aa38136187abb1238dedfc85e88a72c
RANDOM SEED=850812079

node48.alineos.net Linux 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.209
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.209
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1960576 kB
Buffers:          3204 kB
Cached:          29936 kB
SwapCached:       5212 kB
Active:          29184 kB
Inactive:        11564 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1960576 kB
SwapTotal:     4192956 kB
SwapFree:      4181312 kB
Dirty:            9408 kB
Writeback:           0 kB
Mapped:          13492 kB
Slab:            40564 kB
Committed_AS:   754876 kB
PageTables:       1368 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66388 MiB
End job on node48 at 2009-05-02 02:17:50