Trace number 1721333

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds. The first timestamp (if present) is estimated CPU time. The last timestamp is wall clock time.

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerCPU timeWall clock time
MiniSat 2.1 (Sat-race'08 Edition)SAT 22.1466 22.1536

General information on the benchmark

NameAPPLICATIONS/satComp09_BioInstances/
ndhf_xits_22_SAT.cnf
MD5SUM0370c302d744cf5297e07b7d8a6a8190
Bench CategoryAPPLICATION (applications instances)
Best result obtained on this benchmarkSAT
Best CPU time to get the best result obtained on this benchmark1.61875
Satisfiable
(Un)Satisfiability was proved
Number of variables4692
Number of clauses582514
Sum of the clauses size1741093
Maximum clause length23
Minimum clause length2
Number of clauses of size 10
Number of clauses of size 27069
Number of clauses of size 3575414
Number of clauses of size 40
Number of clauses of size 50
Number of clauses of size over 531

Solver Data 

0.00/0.00	c WARNING: for repeatability, setting FPU to use double precision
0.00/0.00	c ============================[ Problem Statistics ]=============================
0.00/0.00	c |                                                                             |
0.39/0.47	c |  Number of variables:          4692                                         |
0.39/0.47	c |  Number of clauses:          582514                                         |
0.39/0.47	c |  Parse time:                   0.42 s                                       |
21.88/21.93	c |  Simplification time:         21.44 s                                       |
21.88/21.93	c |                                                                             |
21.88/21.93	c ============================[ Search Statistics ]==============================
21.88/21.93	c | Conflicts |          ORIGINAL         |          LEARNT          | Progress |
21.88/21.93	c |           |    Vars  Clauses Literals |    Limit  Clauses Lit/Cl |          |
21.88/21.93	c ===============================================================================
21.88/21.93	c |       100 |    3319   572727  1712809 |   209999      100     77 |  0.000 % |
21.88/21.95	c |       250 |    3319   572727  1712809 |   230999      250    100 |  0.000 % |
21.88/21.96	c |       475 |    3319   572727  1712809 |   254099      475    100 |  0.000 % |
21.88/22.00	c |       812 |    3319   572727  1712809 |   279509      812    105 |  0.000 % |
21.99/22.04	c |      1318 |    3319   572727  1712809 |   307460     1318    105 |  0.000 % |
22.09/22.11	c |      2077 |    3319   572727  1712809 |   338206     2077    106 |  0.000 % |
22.09/22.14	c ===============================================================================
22.09/22.14	c restarts              : 15
22.09/22.14	c conflicts             : 2410           (109 /sec)
22.09/22.14	c decisions             : 8399           (381 /sec)
22.09/22.14	c propagations          : 174821         (7922 /sec)
22.09/22.14	c conflict literals     : 263120         (1.52 % deleted)
22.09/22.14	c Memory used           : 36.71 MB
22.09/22.14	c CPU time              : 22.0676 s
22.09/22.14	c 
22.09/22.14	s SATISFIABLE
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Verifier Data 

OK

Watcher Data 

runsolver version 3.2.9 (svn:492) (c) roussel@cril.univ-artois.fr

command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-1721333-1240665627/watcher-1721333-1240665627 -o /tmp/evaluation-result-1721333-1240665627/solver-1721333-1240665627 -C 1200 -W 1800 -M 1800 --output-limit 1,15 HOME/minisat HOME/instance-1721333-1240665627.cnf 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1200 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1230 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.99 0.97 0.98 3/64 18599
/proc/meminfo: memFree=1794752/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=7652 CPUtime=0
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 438 0 0 0 0 0 0 0 18 0 1 0 94595980 7835648 422 1992294400 4194304 5092341 548682068848 18446744073709551615 4270144 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 1913 423 63 219 0 1691 0

[startup+0.105022 s]
/proc/loadavg: 0.99 0.97 0.98 3/64 18599
/proc/meminfo: memFree=1794752/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=13368 CPUtime=0.09
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 2596 0 0 0 9 0 0 0 18 0 1 0 94595980 13688832 2387 1992294400 4194304 5092341 548682068848 18446744073709551615 4270144 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 3342 2387 63 219 0 3120 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 13368

[startup+0.202033 s]
/proc/loadavg: 0.99 0.97 0.98 3/64 18599
/proc/meminfo: memFree=1794752/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=18692 CPUtime=0.19
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 4811 0 0 0 18 1 0 0 19 0 1 0 94595980 19140608 4263 1992294400 4194304 5092341 548682068848 18446744073709551615 4270144 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 4673 4263 63 219 0 4451 0
Current children cumulated CPU time (s) 0.19
Current children cumulated vsize (KiB) 18692

[startup+0.302043 s]
/proc/loadavg: 0.99 0.97 0.98 3/64 18599
/proc/meminfo: memFree=1794752/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=26644 CPUtime=0.29
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 7042 0 0 0 26 3 0 0 19 0 1 0 94595980 27283456 6190 1992294400 4194304 5092341 548682068848 18446744073709551615 4270144 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 6661 6190 63 219 0 6439 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 26644

[startup+0.701089 s]
/proc/loadavg: 0.99 0.97 0.98 3/64 18599
/proc/meminfo: memFree=1794752/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40140 CPUtime=0.69
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 10970 0 0 0 64 5 0 0 22 0 1 0 94595980 41103360 9662 1992294400 4194304 5092341 548682068848 18446744073709551615 4219791 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10035 9662 86 219 0 9813 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 40140

[startup+1.50118 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1756408/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40140 CPUtime=1.49
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 10970 0 0 0 144 5 0 0 25 0 1 0 94595980 41103360 9662 1992294400 4194304 5092341 548682068848 18446744073709551615 4219711 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10035 9662 86 219 0 9813 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 40140

[startup+3.10137 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1756280/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40140 CPUtime=3.09
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 10970 0 0 0 304 5 0 0 25 0 1 0 94595980 41103360 9662 1992294400 4194304 5092341 548682068848 18446744073709551615 4219791 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10035 9662 86 219 0 9813 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 40140

[startup+6.30174 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1756088/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40140 CPUtime=6.29
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 10971 0 0 0 624 5 0 0 25 0 1 0 94595980 41103360 9663 1992294400 4194304 5092341 548682068848 18446744073709551615 4219780 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10035 9663 87 219 0 9813 0
Current children cumulated CPU time (s) 6.29
Current children cumulated vsize (KiB) 40140

[startup+12.7015 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1755896/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40328 CPUtime=12.69
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 11021 0 0 0 1264 5 0 0 25 0 1 0 94595980 41295872 9713 1992294400 4194304 5092341 548682068848 18446744073709551615 4219798 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10082 9713 87 219 0 9860 0
Current children cumulated CPU time (s) 12.69
Current children cumulated vsize (KiB) 40328

Solver just ended. Dumping a history of the last processes samples

[startup+12.8015 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1755896/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40328 CPUtime=12.79
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 11021 0 0 0 1274 5 0 0 25 0 1 0 94595980 41295872 9713 1992294400 4194304 5092341 548682068848 18446744073709551615 4219703 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10082 9713 87 219 0 9860 0
Current children cumulated CPU time (s) 12.79
Current children cumulated vsize (KiB) 40328

[startup+16.0019 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1755896/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40328 CPUtime=15.99
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 11021 0 0 0 1594 5 0 0 25 0 1 0 94595980 41295872 9713 1992294400 4194304 5092341 548682068848 18446744073709551615 4219527 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10082 9713 87 219 0 9860 0
Current children cumulated CPU time (s) 15.99
Current children cumulated vsize (KiB) 40328

[startup+19.2012 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1755960/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40328 CPUtime=19.18
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 11021 0 0 0 1913 5 0 0 25 0 1 0 94595980 41295872 9713 1992294400 4194304 5092341 548682068848 18446744073709551615 4219791 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10082 9713 87 219 0 9860 0
Current children cumulated CPU time (s) 19.18
Current children cumulated vsize (KiB) 40328

[startup+20.8014 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1755960/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40328 CPUtime=20.78
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 11021 0 0 0 2073 5 0 0 25 0 1 0 94595980 41295872 9713 1992294400 4194304 5092341 548682068848 18446744073709551615 4219532 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10082 9713 87 219 0 9860 0
Current children cumulated CPU time (s) 20.78
Current children cumulated vsize (KiB) 40328

[startup+21.6015 s]
/proc/loadavg: 0.99 0.97 0.98 2/65 18600
/proc/meminfo: memFree=1755960/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=40328 CPUtime=21.58
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 11021 0 0 0 2153 5 0 0 25 0 1 0 94595980 41295872 9713 1992294400 4194304 5092341 548682068848 18446744073709551615 4219693 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 10082 9713 87 219 0 9860 0
Current children cumulated CPU time (s) 21.58
Current children cumulated vsize (KiB) 40328

[startup+22.0015 s]
/proc/loadavg: 0.99 0.97 0.98 3/65 18600
/proc/meminfo: memFree=1760888/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=37592 CPUtime=21.99
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 13366 0 0 0 2192 7 0 0 25 0 1 0 94595980 38494208 8508 1992294400 4194304 5092341 548682068848 18446744073709551615 4265869 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 9398 8509 102 219 0 9176 0
Current children cumulated CPU time (s) 21.99
Current children cumulated vsize (KiB) 37592

[startup+22.1056 s]
/proc/loadavg: 0.99 0.97 0.98 3/65 18600
/proc/meminfo: memFree=1760888/2055920 swapFree=4192812/4192956
[pid=18599] ppid=18597 vsize=37592 CPUtime=22.09
/proc/18599/stat : 18599 (minisat) R 18597 18599 18469 0 -1 4194304 13480 0 0 0 2202 7 0 0 25 0 1 0 94595980 38494208 8622 1992294400 4194304 5092341 548682068848 18446744073709551615 4265869 0 0 4096 3 0 0 0 17 1 0 0
/proc/18599/statm: 9398 8622 102 219 0 9176 0
Current children cumulated CPU time (s) 22.09
Current children cumulated vsize (KiB) 37592

Child status: 10
Real time (s): 22.1536
CPU time (s): 22.1466
CPU user time (s): 22.0696
CPU system time (s): 0.076988
CPU usage (%): 99.9684
Max. virtual memory (cumulated for all children) (KiB): 49272

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 22.0696
system time used= 0.076988
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 13546
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 3
involuntary context switches= 53

runsolver used 0.021996 second user time and 0.055991 second system time

The end

Launcher Data 

Begin job on node20 at 2009-04-25 15:20:28
IDJOB=1721333
IDBENCH=71067
IDSOLVER=546
FILE ID=node20/1721333-1240665627
PBS_JOBID= 9186588
Free space on /tmp= 66236 MiB

SOLVER NAME= MiniSat 2.1 (Sat-race'08 Edition)
BENCH NAME= SAT09/APPLICATIONS/satComp09_BioInstances/ndhf_xits_22_SAT.cnf
COMMAND LINE= HOME/minisat BENCHNAME
RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-1721333-1240665627/watcher-1721333-1240665627 -o /tmp/evaluation-result-1721333-1240665627/solver-1721333-1240665627 -C 1200 -W 1800 -M 1800 --output-limit 1,15  HOME/minisat HOME/instance-1721333-1240665627.cnf

TIME LIMIT= 1200 seconds
MEMORY LIMIT= 1800 MiB
MAX NB THREAD= 0

MD5SUM BENCH= 0370c302d744cf5297e07b7d8a6a8190
RANDOM SEED=750570615

node20.alineos.net Linux 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.214
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5931.00
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.214
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1795232 kB
Buffers:         14476 kB
Cached:         173136 kB
SwapCached:          0 kB
Active:          50172 kB
Inactive:       151324 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1795232 kB
SwapTotal:     4192956 kB
SwapFree:      4192812 kB
Dirty:           10768 kB
Writeback:           0 kB
Mapped:          23668 kB
Slab:            45192 kB
Committed_AS:   387780 kB
PageTables:       1396 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66236 MiB
End job on node20 at 2009-04-25 15:20:50