Trace number 3702916

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds. The first timestamp (if present) is estimated CPU time. The last timestamp is wall clock time.

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerobjective functionCPU timeWall clock time
npSolver inc-topdown-quickBound? (problem) 8.4 9.28219

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.07.opb
MD5SUM7a51facc2b0ceeb02915874508a30079
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark37
Best CPU time to get the best result obtained on this benchmark5.63214
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 37
Optimality of the best value was proved YES
Number of variables21756
Total number of constraints1266468
Number of constraints which are clauses1262688
Number of constraints which are cardinality constraints (but not clauses)3780
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint168
Number of terms in the objective function 168
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 168
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 166
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 334
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data 

4.39/4.44	c run inc solver
4.39/4.44	c [INC SYSTEM] run initial solver
4.39/4.44	c [INC SYSTEM] preprocess with white file
6.57/6.65	c [INC SYSTEM] finished preprocessing in 2 s
6.57/6.65	c [INC SYSTEM] execute solver
6.63/6.70	c [INC SEARCH] formula is SAT
6.63/6.70	c [INC SYSTEM] solved the initial formula
8.36/8.40	npSolver-pbo: IterativeSolver.cc:102: void IterativeSolver::checkSolution(): Assertion `parser.cb.ok' failed.
8.40/9.28	HOME/npSolver-pbo-Itdqb.sh: line 18: 23013 Aborted                 (core dumped) ./npSolver-pbo $file $tmp -rnd_seed=$seed -useQuickBound=1 -useBinSearch=0 -useCP2=1 -useInc=1

Verifier Data 

ERROR: no interpretation found !

Watcher Data 

runsolver Copyright (C) 2010-2011 Olivier ROUSSEL

This is runsolver version 3.3.1 (svn: 989)

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-3702916-1338073301/watcher-3702916-1338073301 -o /tmp/evaluation-result-3702916-1338073301/solver-3702916-1338073301 -C 1800 -W 1900 -M 15500 HOME/npSolver-pbo-Itdqb.sh HOME/instance-3702916-1338073301.opb 1993522978 HOME HOME 

running on 4 cores: 1,3,5,7

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 1900 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 15872000 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 15923200 KiB
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 4.17 3.65 2.72 3/178 23012
/proc/meminfo: memFree=28254984/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0

[startup+0.0974959 s]
/proc/loadavg: 4.17 3.65 2.72 3/178 23012
/proc/meminfo: memFree=28254984/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+0.100243 s]
/proc/loadavg: 4.17 3.65 2.72 3/178 23012
/proc/meminfo: memFree=28254984/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+0.300177 s]
/proc/loadavg: 4.17 3.65 2.72 3/178 23012
/proc/meminfo: memFree=28254984/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+0.700228 s]
/proc/loadavg: 4.17 3.65 2.72 3/178 23012
/proc/meminfo: memFree=28254984/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+1.50027 s]
/proc/loadavg: 4.17 3.65 2.72 3/180 23014
/proc/meminfo: memFree=28150256/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
[pid=23013] ppid=23012 vsize=18500 CPUtime=1.48 cores=1,3,5,7
/proc/23013/stat : 23013 (npSolver-pbo) R 23012 23012 4103 0 -1 4202496 2676 0 0 0 148 0 0 0 20 0 1 0 273456309 18944000 2655 33554432000 4194304 5992684 140737020894464 140737020890200 5179600 0 0 4096 0 0 0 0 17 3 0 0 0 0 0
/proc/23013/statm: 4625 2655 145 440 0 4181 0
Current children cumulated CPU time (s) 1.48
Current children cumulated vsize (KiB) 27648

[startup+3.10013 s]
/proc/loadavg: 4.17 3.65 2.72 3/180 23014
/proc/meminfo: memFree=28042628/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
[pid=23013] ppid=23012 vsize=34884 CPUtime=3.09 cores=1,3,5,7
/proc/23013/stat : 23013 (npSolver-pbo) R 23012 23012 4103 0 -1 4202496 3199 0 0 0 308 1 0 0 20 0 1 0 273456309 35721216 4703 33554432000 4194304 5992684 140737020894464 140737020890584 5179600 0 0 4096 0 0 0 0 17 3 0 0 0 0 0
/proc/23013/statm: 8721 4703 145 440 0 8277 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 44032

[startup+6.30035 s]
/proc/loadavg: 4.08 3.64 2.72 3/182 23016
/proc/meminfo: memFree=27550784/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
[pid=23013] ppid=23012 vsize=36852 CPUtime=4.43 cores=1,3,5,7
/proc/23013/stat : 23013 (npSolver-pbo) S 23012 23012 4103 0 -1 4202496 4031 0 0 0 438 5 0 0 20 0 1 0 273456309 37736448 7223 33554432000 4194304 5992684 140737020894464 140737020888912 5175646 0 65536 4102 0 18446744071579302229 0 0 17 3 0 0 0 0 0
/proc/23013/statm: 9213 7223 164 440 0 8769 0
[pid=23015] ppid=23013 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23015/stat : 23015 (cp2_pre.sh) S 23013 23012 4103 0 -1 4202496 610 0 0 0 0 0 0 0 20 0 1 0 273456753 9367552 277 33554432000 4194304 5064252 140733633479584 140733633478288 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 1 0 0 0 0 0
/proc/23015/statm: 2287 277 234 213 0 72 0
[pid=23016] ppid=23015 vsize=104108 CPUtime=1.85 cores=1,3,5,7
/proc/23016/stat : 23016 (coprocessor) R 23015 23012 4103 0 -1 4202496 19632 0 0 0 181 4 0 0 20 0 1 0 273456753 106606592 24728 33554432000 4194304 6586260 140735829406304 140735829402328 4497746 0 0 4096 8404994 0 0 0 17 5 0 0 0 0 0
/proc/23016/statm: 26027 24728 182 584 0 25439 0
Current children cumulated CPU time (s) 6.28
Current children cumulated vsize (KiB) 159256

Solver just ended. Dumping a history of the last processes samples

[startup+6.80027 s]
/proc/loadavg: 4.08 3.64 2.72 3/182 23016
/proc/meminfo: memFree=27550784/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
[pid=23013] ppid=23012 vsize=37520 CPUtime=6.72 cores=1,3,5,7
/proc/23013/stat : 23013 (npSolver-pbo) R 23012 23012 4103 0 -1 4202496 4275 21223 0 0 447 5 213 7 20 0 1 0 273456309 38420480 7423 33554432000 4194304 5992684 140737020894464 140737020880728 5179600 0 0 4096 0 0 0 0 17 3 0 0 0 0 0
/proc/23013/statm: 9380 7423 172 440 0 8936 0
Current children cumulated CPU time (s) 6.72
Current children cumulated vsize (KiB) 46668

[startup+8.40025 s]
/proc/loadavg: 4.08 3.64 2.72 3/181 23018
/proc/meminfo: memFree=27449772/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
[pid=23013] ppid=23012 vsize=37520 CPUtime=8.32 cores=1,3,5,7
/proc/23013/stat : 23013 (npSolver-pbo) R 23012 23012 4103 0 -1 4202496 4275 21223 0 0 606 6 213 7 20 0 1 0 273456309 38420480 7423 33554432000 4194304 5992684 140737020894464 140737020889240 5179600 0 0 4096 0 0 0 0 17 3 0 0 0 0 0
/proc/23013/statm: 9380 7423 172 440 0 8936 0
[pid=23018] ppid=23013 vsize=15932 CPUtime=0.04 cores=1,3,5,7
/proc/23018/stat : 23018 (glucosInc) S 23013 23012 4103 0 -1 4202496 2920 0 0 0 4 0 0 0 20 0 1 0 273456974 16314368 3275 33554432000 4194304 5654031 140735599253984 140735599252296 4976656 0 0 4096 0 18446744071580380219 0 0 17 1 0 0 0 0 0
/proc/23018/statm: 3983 3275 147 357 0 3623 0
Current children cumulated CPU time (s) 8.36
Current children cumulated vsize (KiB) 62600

[startup+8.80021 s]
/proc/loadavg: 4.08 3.64 2.72 3/181 23018
/proc/meminfo: memFree=27449772/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
[pid=23013] ppid=23012 vsize=37524 CPUtime=8.36 cores=1,3,5,7
/proc/23013/stat : 23013 (npSolver-pbo) S 23012 23012 4103 0 -1 4204032 4290 21223 0 0 607 9 213 7 20 0 1 0 273456309 38424576 7436 33554432000 4194304 5992684 140737020894464 140737020889000 5240597 0 0 4096 0 18446744071580380219 0 0 17 3 0 0 0 0 0
/proc/23013/statm: 9381 7436 184 440 0 8937 0
[pid=23018] ppid=23013 vsize=15932 CPUtime=0.04 cores=1,3,5,7
/proc/23018/stat : 23018 (glucosInc) S 23013 23012 4103 0 -1 4202496 2920 0 0 0 4 0 0 0 20 0 1 0 273456974 16314368 3275 33554432000 4194304 5654031 140735599253984 140735599252296 4976656 0 0 4096 0 18446744071580380219 0 0 17 1 0 0 0 0 0
/proc/23018/statm: 3983 3275 147 357 0 3623 0
Current children cumulated CPU time (s) 8.4
Current children cumulated vsize (KiB) 62604

[startup+9.20023 s]
/proc/loadavg: 3.91 3.61 2.71 2/182 23019
/proc/meminfo: memFree=27284604/32873648 swapFree=6860/6860
[pid=23012] ppid=23010 vsize=9148 CPUtime=0 cores=1,3,5,7
/proc/23012/stat : 23012 (npSolver-pbo-It) S 23010 23012 4103 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273456308 9367552 274 33554432000 4194304 5064252 140733523365632 140733523364544 266435454542 0 65536 4100 65538 18446744071579302229 0 0 17 5 0 0 0 0 0
/proc/23012/statm: 2287 274 233 213 0 72 0
[pid=23013] ppid=23012 vsize=37524 CPUtime=8.36 cores=1,3,5,7
/proc/23013/stat : 23013 (npSolver-pbo) S 23012 23012 4103 0 -1 4204032 4290 21223 0 0 607 9 213 7 20 0 1 0 273456309 38424576 7436 33554432000 4194304 5992684 140737020894464 140737020889000 5240597 0 0 4096 0 18446744071580380219 0 0 17 3 0 0 0 0 0
/proc/23013/statm: 9381 7436 184 440 0 8937 0
[pid=23018] ppid=23013 vsize=15932 CPUtime=0.04 cores=1,3,5,7
/proc/23018/stat : 23018 (glucosInc) S 23013 23012 4103 0 -1 4202496 2920 0 0 0 4 0 0 0 20 0 1 0 273456974 16314368 3275 33554432000 4194304 5654031 140735599253984 140735599252296 4976656 0 0 4096 0 18446744071580380219 0 0 17 1 0 0 0 0 0
/proc/23018/statm: 3983 3275 147 357 0 3623 0
Current children cumulated CPU time (s) 8.4
Current children cumulated vsize (KiB) 62604

Child status: 0

# WARNING:
# CPU time reported by wait4() is probably wrong !
# wait4(...,&childrusage) returns 23012 and gives
#  childrusage.ru_utime.tv_sec=8
#  childrusage.ru_utime.tv_usec=212751
#  childrusage.ru_stime.tv_sec=0
#  childrusage.ru_stime.tv_usec=174973
# CPU time returned by wait4() is 8.38772
# while last known CPU time is 8.4
#
# Solver probably didn't/couldn't wait for its children
# Using CPU time of the last sample as value...

Real time (s): 9.28219
CPU time (s): 8.4
CPU user time (s): 8.24
CPU system time (s): 0.16
CPU usage (%): 90.4959
Max. virtual memory (cumulated for all children) (KiB): 161788

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 8.21275
system time used= 0.174973
maximum resident set size= 101672
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 25887
page faults= 0
swaps= 0
block input operations= 0
block output operations= 56688
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 8487
involuntary context switches= 14

runsolver used 0.021996 second user time and 0.06199 second system time

The end

Launcher Data 

Begin job on node116 at 2012-05-27 01:01:43
IDJOB=3702916
IDBENCH=2953
IDSOLVER=2278
FILE ID=node116/3702916-1338073301
RUNJOBID= node116-1338052956-4120
PBS_JOBID= 14624409
Free space on /tmp= 71412 MiB

SOLVER NAME= npSolver inc-topdown-quickBound
BENCH NAME= PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.07.opb
COMMAND LINE= DIR/npSolver-pbo-Itdqb.sh BENCHNAME RANDOMSEED TMPDIR DIR
RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-3702916-1338073301/watcher-3702916-1338073301 -o /tmp/evaluation-result-3702916-1338073301/solver-3702916-1338073301 -C 1800 -W 1900 -M 15500  HOME/npSolver-pbo-Itdqb.sh HOME/instance-3702916-1338073301.opb 1993522978 HOME HOME

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 15500 MiB
NBCORE= 4

MD5SUM BENCH= 7a51facc2b0ceeb02915874508a30079
RANDOM SEED=1993522978

node116.alineos.net Linux 2.6.32-71.29.1.el6.x86_64 #1 SMP Mon Jun 27 19:49:27 BST 2011

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.556
cache size	: 8192 KB
physical id	: 0
siblings	: 4
core id		: 0
cpu cores	: 4
apicid		: 0
initial apicid	: 0
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5333.11
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.556
cache size	: 8192 KB
physical id	: 1
siblings	: 4
core id		: 0
cpu cores	: 4
apicid		: 16
initial apicid	: 16
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.91
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 2
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.556
cache size	: 8192 KB
physical id	: 0
siblings	: 4
core id		: 1
cpu cores	: 4
apicid		: 2
initial apicid	: 2
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5438.54
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 3
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.556
cache size	: 8192 KB
physical id	: 1
siblings	: 4
core id		: 1
cpu cores	: 4
apicid		: 18
initial apicid	: 18
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.91
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 4
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.556
cache size	: 8192 KB
physical id	: 0
siblings	: 4
core id		: 2
cpu cores	: 4
apicid		: 4
initial apicid	: 4
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.92
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 5
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.556
cache size	: 8192 KB
physical id	: 1
siblings	: 4
core id		: 2
cpu cores	: 4
apicid		: 20
initial apicid	: 20
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.92
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 6
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.556
cache size	: 8192 KB
physical id	: 0
siblings	: 4
core id		: 3
cpu cores	: 4
apicid		: 6
initial apicid	: 6
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.90
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 7
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.556
cache size	: 8192 KB
physical id	: 1
siblings	: 4
core id		: 3
cpu cores	: 4
apicid		: 22
initial apicid	: 22
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.91
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:       32873648 kB
MemFree:        28255984 kB
Buffers:          251512 kB
Cached:           706420 kB
SwapCached:         3344 kB
Active:          3604460 kB
Inactive:         201264 kB
Active(anon):    2839400 kB
Inactive(anon):    10844 kB
Active(file):     765060 kB
Inactive(file):   190420 kB
Unevictable:        6860 kB
Mlocked:            6860 kB
SwapTotal:      67108856 kB
SwapFree:       67103496 kB
Dirty:             69004 kB
Writeback:             0 kB
AnonPages:       2839904 kB
Mapped:            13456 kB
Shmem:                96 kB
Slab:             666476 kB
SReclaimable:     109520 kB
SUnreclaim:       556956 kB
KernelStack:        1464 kB
PageTables:         9604 kB
NFS_Unstable:          0 kB
Bounce:                0 kB
WritebackTmp:          0 kB
CommitLimit:    83545680 kB
Committed_AS:    3601048 kB
VmallocTotal:   34359738367 kB
VmallocUsed:      346400 kB
VmallocChunk:   34341988052 kB
HardwareCorrupted:     0 kB
AnonHugePages:   1495040 kB
HugePages_Total:       0
HugePages_Free:        0
HugePages_Rsvd:        0
HugePages_Surp:        0
Hugepagesize:       2048 kB
DirectMap4k:        7680 kB
DirectMap2M:    33538048 kB

Free space on /tmp at the end= 71372 MiB
End job on node116 at 2012-05-27 01:01:52