Trace number 3699723

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds. The first timestamp (if present) is estimated CPU time. The last timestamp is wall clock time.

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerobjective functionCPU timeWall clock time
npSolver inc? (problem) 8.82 9.37241

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.02.opb
MD5SUM88c0da0b31a99941a4f2c09165ead688
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark44
Best CPU time to get the best result obtained on this benchmark6.548
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 44
Optimality of the best value was proved YES
Number of variables21566
Total number of constraints1314050
Number of constraints which are clauses1310032
Number of constraints which are cardinality constraints (but not clauses)4018
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint164
Number of terms in the objective function 164
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 164
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 162
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 326
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data 

4.59/4.67	c run inc solver
4.59/4.67	c [INC SYSTEM] run initial solver
4.59/4.67	c [INC SYSTEM] preprocess with white file
6.97/7.00	c [INC SYSTEM] finished preprocessing in 2 s
6.97/7.00	c [INC SYSTEM] execute solver
6.97/7.05	c [INC SEARCH] formula is SAT
6.97/7.05	c [INC SYSTEM] solved the initial formula
8.76/8.83	npSolver-pbo: IterativeSolver.cc:102: void IterativeSolver::checkSolution(): Assertion `parser.cb.ok' failed.
8.82/9.37	HOME/npSolver-pbo-I.sh: line 18:  2484 Aborted                 (core dumped) ./npSolver-pbo $file $tmp -rnd_seed=$seed -useQuickBound=0 -useBinSearch=1 -useCP2=1 -useInc=1

Verifier Data 

ERROR: no interpretation found !

Watcher Data 

runsolver Copyright (C) 2010-2011 Olivier ROUSSEL

This is runsolver version 3.3.1 (svn: 989)

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-3699723-1338072864/watcher-3699723-1338072864 -o /tmp/evaluation-result-3699723-1338072864/solver-3699723-1338072864 -C 1800 -W 1900 -M 15500 HOME/npSolver-pbo-I.sh HOME/instance-3699723-1338072864.opb 508585280 HOME HOME 

running on 4 cores: 0,2,4,6

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 1900 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 15872000 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 15923200 KiB
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 3.30 3.33 2.68 3/178 2483
/proc/meminfo: memFree=28368548/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0

[startup+0.0518751 s]
/proc/loadavg: 3.30 3.33 2.68 3/178 2483
/proc/meminfo: memFree=28368548/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+0.100277 s]
/proc/loadavg: 3.30 3.33 2.68 3/178 2483
/proc/meminfo: memFree=28368548/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+0.905082 s]
/proc/loadavg: 3.30 3.33 2.68 3/178 2483
/proc/meminfo: memFree=28368548/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+1.0003 s]
/proc/loadavg: 3.30 3.33 2.68 3/178 2483
/proc/meminfo: memFree=28368548/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+1.50025 s]
/proc/loadavg: 3.30 3.33 2.68 3/178 2483
/proc/meminfo: memFree=28368548/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 9148

[startup+3.10028 s]
/proc/loadavg: 3.30 3.33 2.68 3/181 2486
/proc/meminfo: memFree=28350528/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
[pid=2484] ppid=2483 vsize=34884 CPUtime=3.08 cores=0,2,4,6
/proc/2484/stat : 2484 (npSolver-pbo) R 2483 2483 339 0 -1 4202496 2876 0 0 0 307 1 0 0 20 0 1 0 273413312 35721216 4889 33554432000 4194304 5992684 140736757747184 140736757743304 5179600 0 0 4096 0 0 0 0 17 2 0 0 0 0 0
/proc/2484/statm: 8721 4889 145 440 0 8277 0
Current children cumulated CPU time (s) 3.08
Current children cumulated vsize (KiB) 44032

[startup+6.30051 s]
/proc/loadavg: 3.27 3.33 2.69 3/183 2488
/proc/meminfo: memFree=28208064/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
[pid=2484] ppid=2483 vsize=36688 CPUtime=4.66 cores=0,2,4,6
/proc/2484/stat : 2484 (npSolver-pbo) S 2483 2483 339 0 -1 4202496 3901 0 0 0 460 6 0 0 20 0 1 0 273413312 37568512 7389 33554432000 4194304 5992684 140736757747184 140736757741632 5175646 0 65536 4102 0 18446744071579302229 0 0 17 2 0 0 0 0 0
/proc/2484/statm: 9172 7389 164 440 0 8728 0
[pid=2487] ppid=2484 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2487/stat : 2487 (cp2_pre.sh) S 2484 2483 339 0 -1 4202496 610 0 0 0 0 0 0 0 20 0 1 0 273413779 9367552 277 33554432000 4194304 5064252 140736662308096 140736662306800 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 0 0 0 0 0 0
/proc/2487/statm: 2287 277 234 213 0 72 0
[pid=2488] ppid=2487 vsize=103184 CPUtime=1.62 cores=0,2,4,6
/proc/2488/stat : 2488 (coprocessor) R 2487 2483 339 0 -1 4202496 19862 0 0 0 158 4 0 0 20 0 1 0 273413779 105660416 24957 33554432000 4194304 6586260 140737108959040 140737108954792 4496489 0 0 4096 8404994 0 0 0 17 4 0 0 0 0 0
/proc/2488/statm: 25796 24957 177 584 0 25208 0
Current children cumulated CPU time (s) 6.28
Current children cumulated vsize (KiB) 158168

Solver just ended. Dumping a history of the last processes samples

[startup+7.00045 s]
/proc/loadavg: 3.27 3.33 2.69 3/183 2488
/proc/meminfo: memFree=28208064/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
[pid=2484] ppid=2483 vsize=36688 CPUtime=4.66 cores=0,2,4,6
/proc/2484/stat : 2484 (npSolver-pbo) S 2483 2483 339 0 -1 4202496 3901 0 0 0 460 6 0 0 20 0 1 0 273413312 37568512 7389 33554432000 4194304 5992684 140736757747184 140736757741632 5175646 0 65536 4102 0 18446744071579302229 0 0 17 2 0 0 0 0 0
/proc/2484/statm: 9172 7389 164 440 0 8728 0
[pid=2487] ppid=2484 vsize=9148 CPUtime=2.31 cores=0,2,4,6
/proc/2487/stat : 2487 (cp2_pre.sh) S 2484 2483 339 0 -1 4202496 634 20870 0 0 0 0 224 7 20 0 1 0 273413779 9367552 281 33554432000 4194304 5064252 140736662308096 140736662306800 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 0 0 0 0 0 0
/proc/2487/statm: 2287 281 238 213 0 72 0
Current children cumulated CPU time (s) 6.97
Current children cumulated vsize (KiB) 54984

[startup+8.60032 s]
/proc/loadavg: 3.27 3.33 2.69 3/182 2490
/proc/meminfo: memFree=28314992/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
[pid=2484] ppid=2483 vsize=37436 CPUtime=8.52 cores=0,2,4,6
/proc/2484/stat : 2484 (npSolver-pbo) R 2483 2483 339 0 -1 4202496 4142 21772 0 0 614 7 224 7 20 0 1 0 273413312 38334464 7588 33554432000 4194304 5992684 140736757747184 140736757741960 5179600 0 0 4096 0 0 0 0 17 2 0 0 0 0 0
/proc/2484/statm: 9359 7588 172 440 0 8915 0
[pid=2490] ppid=2484 vsize=15644 CPUtime=0.04 cores=0,2,4,6
/proc/2490/stat : 2490 (glucosInc) S 2484 2483 339 0 -1 4202496 2453 0 0 0 4 0 0 0 20 0 1 0 273414012 16019456 3449 33554432000 4194304 5654031 140735601560992 140735601559304 4976656 0 0 4096 0 18446744071580380219 0 0 17 0 0 0 0 0 0
/proc/2490/statm: 3911 3449 147 357 0 3551 0
Current children cumulated CPU time (s) 8.56
Current children cumulated vsize (KiB) 62228

[startup+9.00037 s]
/proc/loadavg: 3.27 3.33 2.69 3/182 2490
/proc/meminfo: memFree=28314992/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
[pid=2484] ppid=2483 vsize=37440 CPUtime=8.78 cores=0,2,4,6
/proc/2484/stat : 2484 (npSolver-pbo) S 2483 2483 339 0 -1 4204032 4157 21772 0 0 638 9 224 7 20 0 1 0 273413312 38338560 7601 33554432000 4194304 5992684 140736757747184 140736757741720 5240597 0 0 4096 0 18446744071580380219 0 0 17 0 0 0 0 0 0
/proc/2484/statm: 9360 7601 184 440 0 8916 0
[pid=2490] ppid=2484 vsize=15644 CPUtime=0.04 cores=0,2,4,6
/proc/2490/stat : 2490 (glucosInc) S 2484 2483 339 0 -1 4202496 2453 0 0 0 4 0 0 0 20 0 1 0 273414012 16019456 3449 33554432000 4194304 5654031 140735601560992 140735601559304 4976656 0 0 4096 0 18446744071580380219 0 0 17 0 0 0 0 0 0
/proc/2490/statm: 3911 3449 147 357 0 3551 0
Current children cumulated CPU time (s) 8.82
Current children cumulated vsize (KiB) 62232

[startup+9.20031 s]
/proc/loadavg: 3.27 3.33 2.69 3/182 2490
/proc/meminfo: memFree=28314992/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
[pid=2484] ppid=2483 vsize=37440 CPUtime=8.78 cores=0,2,4,6
/proc/2484/stat : 2484 (npSolver-pbo) S 2483 2483 339 0 -1 4204032 4157 21772 0 0 638 9 224 7 20 0 1 0 273413312 38338560 7601 33554432000 4194304 5992684 140736757747184 140736757741720 5240597 0 0 4096 0 18446744071580380219 0 0 17 0 0 0 0 0 0
/proc/2484/statm: 9360 7601 184 440 0 8916 0
[pid=2490] ppid=2484 vsize=15644 CPUtime=0.04 cores=0,2,4,6
/proc/2490/stat : 2490 (glucosInc) S 2484 2483 339 0 -1 4202496 2453 0 0 0 4 0 0 0 20 0 1 0 273414012 16019456 3449 33554432000 4194304 5654031 140735601560992 140735601559304 4976656 0 0 4096 0 18446744071580380219 0 0 17 0 0 0 0 0 0
/proc/2490/statm: 3911 3449 147 357 0 3551 0
Current children cumulated CPU time (s) 8.82
Current children cumulated vsize (KiB) 62232

[startup+9.30036 s]
/proc/loadavg: 3.27 3.33 2.69 3/182 2490
/proc/meminfo: memFree=28314992/32873648 swapFree=6844/6844
[pid=2483] ppid=2481 vsize=9148 CPUtime=0 cores=0,2,4,6
/proc/2483/stat : 2483 (npSolver-pbo-I.) S 2481 2483 339 0 -1 4202496 357 0 0 0 0 0 0 0 20 0 1 0 273413312 9367552 275 33554432000 4194304 5064252 140735041021680 140735041020592 271787386446 0 65536 4100 65538 18446744071579302229 0 0 17 4 0 0 0 0 0
/proc/2483/statm: 2287 275 233 213 0 72 0
[pid=2484] ppid=2483 vsize=37440 CPUtime=8.78 cores=0,2,4,6
/proc/2484/stat : 2484 (npSolver-pbo) S 2483 2483 339 0 -1 4204032 4157 21772 0 0 638 9 224 7 20 0 1 0 273413312 38338560 7601 33554432000 4194304 5992684 140736757747184 140736757741720 5240597 0 0 4096 0 18446744071580380219 0 0 17 0 0 0 0 0 0
/proc/2484/statm: 9360 7601 184 440 0 8916 0
[pid=2490] ppid=2484 vsize=15644 CPUtime=0.04 cores=0,2,4,6
/proc/2490/stat : 2490 (glucosInc) S 2484 2483 339 0 -1 4202496 2453 0 0 0 4 0 0 0 20 0 1 0 273414012 16019456 3449 33554432000 4194304 5654031 140735601560992 140735601559304 4976656 0 0 4096 0 18446744071580380219 0 0 17 0 0 0 0 0 0
/proc/2490/statm: 3911 3449 147 357 0 3551 0
Current children cumulated CPU time (s) 8.82
Current children cumulated vsize (KiB) 62232

Child status: 0

# WARNING:
# CPU time reported by wait4() is probably wrong !
# wait4(...,&childrusage) returns 2483 and gives
#  childrusage.ru_utime.tv_sec=8
#  childrusage.ru_utime.tv_usec=634687
#  childrusage.ru_stime.tv_sec=0
#  childrusage.ru_stime.tv_usec=168974
# CPU time returned by wait4() is 8.80366
# while last known CPU time is 8.82
#
# Solver probably didn't/couldn't wait for its children
# Using CPU time of the last sample as value...

Real time (s): 9.37241
CPU time (s): 8.82
CPU user time (s): 8.66
CPU system time (s): 0.16
CPU usage (%): 94.106
Max. virtual memory (cumulated for all children) (KiB): 162140

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 8.63469
system time used= 0.168974
maximum resident set size= 103860
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 26303
page faults= 0
swaps= 0
block input operations= 0
block output operations= 57864
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 7923
involuntary context switches= 29

runsolver used 0.014997 second user time and 0.068989 second system time

The end

Launcher Data 

Begin job on node115 at 2012-05-27 00:54:25
IDJOB=3699723
IDBENCH=2956
IDSOLVER=2276
FILE ID=node115/3699723-1338072864
RUNJOBID= node115-1338051787-355
PBS_JOBID= 14624382
Free space on /tmp= 71512 MiB

SOLVER NAME= npSolver inc
BENCH NAME= PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.02.opb
COMMAND LINE= DIR/npSolver-pbo-I.sh BENCHNAME RANDOMSEED TMPDIR DIR
RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-3699723-1338072864/watcher-3699723-1338072864 -o /tmp/evaluation-result-3699723-1338072864/solver-3699723-1338072864 -C 1800 -W 1900 -M 15500  HOME/npSolver-pbo-I.sh HOME/instance-3699723-1338072864.opb 508585280 HOME HOME

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 15500 MiB
NBCORE= 4

MD5SUM BENCH= 88c0da0b31a99941a4f2c09165ead688
RANDOM SEED=508585280

node115.alineos.net Linux 2.6.32-71.29.1.el6.x86_64 #1 SMP Mon Jun 27 19:49:27 BST 2011

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.462
cache size	: 8192 KB
physical id	: 0
siblings	: 4
core id		: 0
cpu cores	: 4
apicid		: 0
initial apicid	: 0
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5332.92
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.462
cache size	: 8192 KB
physical id	: 1
siblings	: 4
core id		: 0
cpu cores	: 4
apicid		: 16
initial apicid	: 16
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.91
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 2
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.462
cache size	: 8192 KB
physical id	: 0
siblings	: 4
core id		: 1
cpu cores	: 4
apicid		: 2
initial apicid	: 2
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.92
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 3
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.462
cache size	: 8192 KB
physical id	: 1
siblings	: 4
core id		: 1
cpu cores	: 4
apicid		: 18
initial apicid	: 18
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.91
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 4
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.462
cache size	: 8192 KB
physical id	: 0
siblings	: 4
core id		: 2
cpu cores	: 4
apicid		: 4
initial apicid	: 4
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.92
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 5
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.462
cache size	: 8192 KB
physical id	: 1
siblings	: 4
core id		: 2
cpu cores	: 4
apicid		: 20
initial apicid	: 20
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.91
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 6
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.462
cache size	: 8192 KB
physical id	: 0
siblings	: 4
core id		: 3
cpu cores	: 4
apicid		: 6
initial apicid	: 6
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.91
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:

processor	: 7
vendor_id	: GenuineIntel
cpu family	: 6
model		: 26
model name	: Intel(R) Xeon(R) CPU           X5550  @ 2.67GHz
stepping	: 5
cpu MHz		: 2666.462
cache size	: 8192 KB
physical id	: 1
siblings	: 4
core id		: 3
cpu cores	: 4
apicid		: 22
initial apicid	: 22
fpu		: yes
fpu_exception	: yes
cpuid level	: 11
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology nonstop_tsc aperfmperf pni dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 popcnt lahf_lm ida tpr_shadow vnmi flexpriority ept vpid
bogomips	: 5331.91
clflush size	: 64
cache_alignment	: 64
address sizes	: 40 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:       32873648 kB
MemFree:        28368812 kB
Buffers:          285952 kB
Cached:          3205168 kB
SwapCached:            0 kB
Active:          1303468 kB
Inactive:        2369572 kB
Active(anon):     184528 kB
Inactive(anon):        0 kB
Active(file):    1118940 kB
Inactive(file):  2369572 kB
Unevictable:        6844 kB
Mlocked:            6844 kB
SwapTotal:      67108856 kB
SwapFree:       67108856 kB
Dirty:             54968 kB
Writeback:             0 kB
AnonPages:        211420 kB
Mapped:            15596 kB
Shmem:               200 kB
Slab:             673564 kB
SReclaimable:     116664 kB
SUnreclaim:       556900 kB
KernelStack:        1464 kB
PageTables:         4528 kB
NFS_Unstable:          0 kB
Bounce:                0 kB
WritebackTmp:          0 kB
CommitLimit:    83545680 kB
Committed_AS:     331556 kB
VmallocTotal:   34359738367 kB
VmallocUsed:      346400 kB
VmallocChunk:   34341988052 kB
HardwareCorrupted:     0 kB
AnonHugePages:    112640 kB
HugePages_Total:       0
HugePages_Free:        0
HugePages_Rsvd:        0
HugePages_Surp:        0
Hugepagesize:       2048 kB
DirectMap4k:        7680 kB
DirectMap2M:    33538048 kB

Free space on /tmp at the end= 71472 MiB
End job on node115 at 2012-05-27 00:54:35