Trace number 355253

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS4 2007-03-23No Cert. 1800.04 1801.14

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-unif-100_100.00.opb
MD5SUM9e8d546df5cfe52cfb5a29d8ae802e41
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark34
Best CPU time to get the best result obtained on this benchmark233.438
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 34
Optimality of the best value was proved YES
Number of variables8601
Total number of constraints386810
Number of constraints which are clauses384742
Number of constraints which are cardinality constraints (but not clauses)2068
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint94
Number of terms in the objective function 94
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 94
Number of bits of the sum of numbers in the objective function 7
Biggest number in a constraint 92
Number of bits of the biggest number in a constraint 7
Biggest sum of numbers in a constraint 186
Number of bits of the biggest sum of numbers8
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Quality of the solution as a function of time


Download the above graph as a PDF file / as an EPS file

Solver Data (download as text)

0.00/0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00/0.00	c Solving /tmp/evaluation/355253-1176789080/instance-355253-1176789080.opb ......
4.18/4.26	c done parsing opb.
4.18/4.26	o 94
4.18/4.27	o 93
4.18/4.28	o 92
4.18/4.28	o 91
4.18/4.29	o 90
4.18/4.30	o 89
4.28/4.31	o 88
4.28/4.31	o 87
4.28/4.32	o 86
4.28/4.33	o 85
4.28/4.33	o 84
4.28/4.34	o 83
4.28/4.35	o 82
4.28/4.35	o 81
4.28/4.36	o 80
4.28/4.36	o 79
4.28/4.37	o 78
4.28/4.38	o 77
4.28/4.38	o 76
4.28/4.39	o 75
4.28/4.40	o 74
4.37/4.40	o 73
4.37/4.41	o 72
4.37/4.42	o 71
4.37/4.42	o 70
4.37/4.43	o 69
4.37/4.43	o 68
4.37/4.44	o 67
4.37/4.45	o 66
4.37/4.45	o 65
4.37/4.46	o 64
4.37/4.47	o 63
4.37/4.47	o 62
4.37/4.48	o 61
4.37/4.49	o 60
4.37/4.49	o 59
4.46/4.50	o 58
4.46/4.50	o 57
4.46/4.51	o 56
4.46/4.52	o 55
4.46/4.54	o 54
4.77/4.89	o 53
4.97/5.05	o 52
5.37/5.47	o 51
5.66/5.79	o 50
14.36/14.41	o 49
17.86/17.92	o 48
19.56/19.63	o 47
25.56/25.68	o 45
25.66/25.72	o 44
25.66/25.76	o 43
26.66/26.74	o 42
26.76/26.82	o 41
32.96/33.00	o 40
609.82/610.24	o 39
991.98/992.69	o 38
1800.00/1801.10	s SATISFIABLE

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355253-1176789080/instance-355253-1176789080.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node26/watcher-355253-1176789080 -o ROOT/results/node26/solver-355253-1176789080 -C 1800 -W 3600 -M 1800 --output-limit 1,15 /tmp/evaluation/355253-1176789080/PBS4 /tmp/evaluation/355253-1176789080/instance-355253-1176789080.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 7643
/proc/meminfo: memFree=1705800/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=2544 CPUtime=0
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 421 0 0 0 0 0 0 0 18 0 1 0 126824802 2605056 403 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134593142 0 0 4096 0 0 0 0 17 0 0 0
/proc/7643/statm: 636 403 87 219 0 413 0

[startup+0.0840249 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 7643
/proc/meminfo: memFree=1705800/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=3428 CPUtime=0.07
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 738 0 0 0 7 0 0 0 18 0 1 0 126824802 3510272 682 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134530219 0 0 4096 0 0 0 0 17 0 0 0
/proc/7643/statm: 857 682 88 219 0 634 0
Current children cumulated CPU time (s) 0.07
Current children cumulated vsize (KiB) 3428

[startup+0.101026 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 7643
/proc/meminfo: memFree=1705800/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=3428 CPUtime=0.09
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 761 0 0 0 9 0 0 0 18 0 1 0 126824802 3510272 705 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134530279 0 0 4096 0 0 0 0 17 0 0 0
/proc/7643/statm: 857 705 88 219 0 634 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 3428

[startup+0.301044 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 7643
/proc/meminfo: memFree=1705800/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=5052 CPUtime=0.29
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 1226 0 0 0 29 0 0 0 19 0 1 0 126824802 5173248 1024 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134529777 0 0 4096 0 0 0 0 17 0 0 0
/proc/7643/statm: 1263 1024 89 219 0 1040 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 5052

[startup+0.701081 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 7643
/proc/meminfo: memFree=1705800/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=11088 CPUtime=0.69
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 2514 0 0 0 68 1 0 0 23 0 1 0 126824802 11354112 1734 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 0 0 0
/proc/7643/statm: 2772 1734 89 219 0 2549 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 11088

[startup+1.50216 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7644
/proc/meminfo: memFree=1697344/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=18940 CPUtime=1.49
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 4466 0 0 0 146 3 0 0 25 0 1 0 126824802 19394560 2917 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134797988 0 0 4096 0 0 0 0 17 1 0 0
/proc/7643/statm: 4735 2917 89 219 0 4512 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 18940

[startup+3.10131 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7644
/proc/meminfo: memFree=1690112/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=35428 CPUtime=3.08
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 8540 0 0 0 303 5 0 0 25 0 1 0 126824802 36278272 5454 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134594359 0 0 4096 0 0 0 0 17 1 0 0
/proc/7643/statm: 8857 5454 89 219 0 8634 0
Current children cumulated CPU time (s) 3.08
Current children cumulated vsize (KiB) 35428

[startup+6.30161 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7644
/proc/meminfo: memFree=1676736/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=36956 CPUtime=6.26
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 10523 0 0 0 615 11 0 0 25 0 1 0 126824802 37842944 7437 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 9239 7437 104 219 0 9016 0
Current children cumulated CPU time (s) 6.26
Current children cumulated vsize (KiB) 36956

[startup+12.7012 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7644
/proc/meminfo: memFree=1673352/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=37424 CPUtime=12.67
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 11355 0 0 0 1246 21 0 0 25 0 1 0 126824802 38322176 8269 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 9356 8269 104 219 0 9133 0
Current children cumulated CPU time (s) 12.67
Current children cumulated vsize (KiB) 37424

[startup+25.5014 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7644
/proc/meminfo: memFree=1666440/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=54268 CPUtime=25.46
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 13051 0 0 0 2511 35 0 0 25 0 1 0 126824802 55570432 9965 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 13567 9965 104 219 0 13344 0
Current children cumulated CPU time (s) 25.46
Current children cumulated vsize (KiB) 54268

[startup+51.1018 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7644
/proc/meminfo: memFree=1662664/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=54744 CPUtime=51.04
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 14007 0 0 0 5045 59 0 0 25 0 1 0 126824802 56057856 10921 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 13686 10921 104 219 0 13463 0
Current children cumulated CPU time (s) 51.04
Current children cumulated vsize (KiB) 54744

[startup+102.307 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7644
/proc/meminfo: memFree=1651528/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=88640 CPUtime=102.21
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 16737 0 0 0 10130 91 0 0 25 0 1 0 126824802 90767360 13651 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 22160 13651 104 219 0 21937 0
Current children cumulated CPU time (s) 102.21
Current children cumulated vsize (KiB) 88640

[startup+162.301 s]
/proc/loadavg: 1.11 1.03 1.01 2/78 7644
/proc/meminfo: memFree=1639816/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=90032 CPUtime=162.17
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 19728 0 0 0 16090 127 0 0 25 0 1 0 126824802 92192768 16642 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 22508 16642 104 219 0 22285 0
Current children cumulated CPU time (s) 162.17
Current children cumulated vsize (KiB) 90032

[startup+222.302 s]
/proc/loadavg: 1.11 1.04 1.00 2/78 7644
/proc/meminfo: memFree=1629576/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=91172 CPUtime=222.14
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 22212 0 0 0 22056 158 0 0 25 0 1 0 126824802 93360128 19126 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 22793 19126 104 219 0 22570 0
Current children cumulated CPU time (s) 222.14
Current children cumulated vsize (KiB) 91172

[startup+282.301 s]
/proc/loadavg: 1.04 1.03 1.00 2/78 7644
/proc/meminfo: memFree=1621512/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=92232 CPUtime=282.1
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 24279 0 0 0 28024 186 0 0 25 0 1 0 126824802 94445568 21193 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 23058 21193 104 219 0 22835 0
Current children cumulated CPU time (s) 282.1
Current children cumulated vsize (KiB) 92232

[startup+342.302 s]
/proc/loadavg: 1.01 1.02 1.00 2/78 7644
/proc/meminfo: memFree=1613704/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=158556 CPUtime=342.07
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 26177 0 0 0 33991 216 0 0 25 0 1 0 126824802 162361344 23091 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547089 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 39639 23091 104 219 0 39416 0
Current children cumulated CPU time (s) 342.07
Current children cumulated vsize (KiB) 158556

[startup+402.301 s]
/proc/loadavg: 1.00 1.02 1.00 2/78 7644
/proc/meminfo: memFree=1607368/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=159256 CPUtime=402.04
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 27761 0 0 0 39963 241 0 0 25 0 1 0 126824802 163078144 24675 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134546913 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 39814 24675 104 219 0 39591 0
Current children cumulated CPU time (s) 402.04
Current children cumulated vsize (KiB) 159256

[startup+462.301 s]
/proc/loadavg: 1.00 1.01 1.00 2/78 7644
/proc/meminfo: memFree=1601160/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=160024 CPUtime=462
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 29321 0 0 0 45934 266 0 0 25 0 1 0 126824802 163864576 26235 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 40006 26235 104 219 0 39783 0
Current children cumulated CPU time (s) 462
Current children cumulated vsize (KiB) 160024

[startup+522.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7644
/proc/meminfo: memFree=1593736/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=160800 CPUtime=521.97
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 31164 0 0 0 51905 292 0 0 25 0 1 0 126824802 164659200 28078 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 40200 28078 104 219 0 39977 0
Current children cumulated CPU time (s) 521.97
Current children cumulated vsize (KiB) 160800

[startup+582.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/84 7670
/proc/meminfo: memFree=1588112/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=174196 CPUtime=581.95
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 35290 0 0 0 57878 317 0 0 25 0 1 0 126824802 178376704 29131 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 43549 29131 104 219 0 43326 0
Current children cumulated CPU time (s) 581.95
Current children cumulated vsize (KiB) 174196

[startup+642.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1584384/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=174604 CPUtime=641.9
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 36479 0 0 0 63833 357 0 0 25 0 1 0 126824802 178794496 30320 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 43651 30320 104 219 0 43428 0
Current children cumulated CPU time (s) 641.9
Current children cumulated vsize (KiB) 174604


################
# More data... #
################

[startup+882.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1568392/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=175760 CPUtime=881.74
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 40557 0 0 0 87722 452 0 0 25 0 1 0 126824802 179978240 34398 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 43940 34398 104 219 0 43717 0
Current children cumulated CPU time (s) 881.74
Current children cumulated vsize (KiB) 175760

[startup+942.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1563784/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=176340 CPUtime=941.71
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 41710 0 0 0 93697 474 0 0 25 0 1 0 126824802 180572160 35551 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 44085 35551 104 219 0 43862 0
Current children cumulated CPU time (s) 941.71
Current children cumulated vsize (KiB) 176340

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1560136/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=176672 CPUtime=1001.67
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 42658 0 0 0 99669 498 0 0 25 0 1 0 126824802 180912128 36466 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 44168 36466 104 219 0 43945 0
Current children cumulated CPU time (s) 1001.67
Current children cumulated vsize (KiB) 176672

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1556104/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=176800 CPUtime=1061.64
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 43702 0 0 0 105646 518 0 0 25 0 1 0 126824802 181043200 37510 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 44200 37510 104 219 0 43977 0
Current children cumulated CPU time (s) 1061.64
Current children cumulated vsize (KiB) 176800

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1552008/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=177144 CPUtime=1121.61
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 44693 0 0 0 111619 542 0 0 25 0 1 0 126824802 181395456 38501 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547224 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 44286 38501 104 219 0 44063 0
Current children cumulated CPU time (s) 1121.61
Current children cumulated vsize (KiB) 177144

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1550472/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=177504 CPUtime=1181.56
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 45077 0 0 0 117592 564 0 0 25 0 1 0 126824802 181764096 38885 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 44376 38885 104 219 0 44153 0
Current children cumulated CPU time (s) 1181.56
Current children cumulated vsize (KiB) 177504

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1547016/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=177888 CPUtime=1241.53
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 45906 0 0 0 123572 581 0 0 25 0 1 0 126824802 182157312 39714 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547089 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 44472 39714 104 219 0 44249 0
Current children cumulated CPU time (s) 1241.53
Current children cumulated vsize (KiB) 177888

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1544008/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=178524 CPUtime=1301.51
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 46662 0 0 0 129549 602 0 0 25 0 1 0 126824802 182808576 40470 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 44631 40470 104 219 0 44408 0
Current children cumulated CPU time (s) 1301.51
Current children cumulated vsize (KiB) 178524

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1541896/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=178780 CPUtime=1361.47
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 47216 0 0 0 135527 620 0 0 25 0 1 0 126824802 183070720 41024 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547154 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 44695 41024 104 219 0 44472 0
Current children cumulated CPU time (s) 1361.47
Current children cumulated vsize (KiB) 178780

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1538504/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=180084 CPUtime=1421.44
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 48058 0 0 0 141505 639 0 0 25 0 1 0 126824802 184406016 41866 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 45021 41866 104 219 0 44798 0
Current children cumulated CPU time (s) 1421.44
Current children cumulated vsize (KiB) 180084

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1534856/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=311416 CPUtime=1481.4
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 48906 0 0 0 147483 657 0 0 25 0 1 0 126824802 318889984 42714 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134549582 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 77854 42714 104 219 0 77631 0
Current children cumulated CPU time (s) 1481.4
Current children cumulated vsize (KiB) 311416

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1531208/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=312476 CPUtime=1541.36
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 49854 0 0 0 153462 674 0 0 25 0 1 0 126824802 319975424 43629 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 78119 43629 104 219 0 77896 0
Current children cumulated CPU time (s) 1541.36
Current children cumulated vsize (KiB) 312476

[startup+1602.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1527176/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=312736 CPUtime=1601.32
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 50867 0 0 0 159440 692 0 0 25 0 1 0 126824802 320241664 44642 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547339 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 78184 44642 104 219 0 77961 0
Current children cumulated CPU time (s) 1601.32
Current children cumulated vsize (KiB) 312736

[startup+1662.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1523144/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=313288 CPUtime=1661.28
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 51882 0 0 0 165418 710 0 0 25 0 1 0 126824802 320806912 45657 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134559381 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 78322 45657 104 219 0 78099 0
Current children cumulated CPU time (s) 1661.28
Current children cumulated vsize (KiB) 313288

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1519624/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=313548 CPUtime=1721.25
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 52780 0 0 0 171397 728 0 0 25 0 1 0 126824802 321073152 46555 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547138 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 78387 46555 104 219 0 78164 0
Current children cumulated CPU time (s) 1721.25
Current children cumulated vsize (KiB) 313548

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1516296/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=313808 CPUtime=1781.21
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 53548 0 0 0 177378 743 0 0 25 0 1 0 126824802 321339392 47323 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547371 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 78452 47323 104 219 0 78229 0
Current children cumulated CPU time (s) 1781.21
Current children cumulated vsize (KiB) 313808



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.1 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1514056/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=314120 CPUtime=1800
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 54100 0 0 0 179250 750 0 0 25 0 1 0 126824802 321658880 47875 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134548393 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 78530 47875 104 219 0 78307 0
Current children cumulated CPU time (s) 1800
Current children cumulated vsize (KiB) 314120

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1801.1 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 7842
/proc/meminfo: memFree=1514056/2055920 swapFree=4170260/4192956
[pid=7643] ppid=7641 vsize=314120 CPUtime=1800
/proc/7643/stat : 7643 (PBS4) R 7641 7643 6831 0 -1 4194304 54100 0 0 0 179250 750 0 0 25 0 1 0 126824802 321658880 47875 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134548393 0 0 4096 16384 0 0 0 17 0 0 0
/proc/7643/statm: 78530 47875 104 219 0 78307 0
Current children cumulated CPU time (s) 1800
Current children cumulated vsize (KiB) 314120

Child status: 0
Real time (s): 1801.14
CPU time (s): 1800.04
CPU user time (s): 1792.51
CPU system time (s): 7.53285
CPU usage (%): 99.9391
Max. virtual memory (cumulated for all children) (KiB): 314120

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1792.51
system time used= 7.53285
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 54101
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 8
involuntary context switches= 28869

runsolver used 1.71474 second user time and 4.85626 second system time

The end

Launcher Data (download as text)

Begin job on node26 on Tue Apr 17 05:51:20 UTC 2007

IDJOB= 355253
IDBENCH= 2957
IDSOLVER= 157
FILE ID= node26/355253-1176789080

PBS_JOBID= 4580821

Free space on /tmp= 66510 MiB

SOLVER NAME= PBS4 2007-03-23
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-unif-100_100.00.opb
COMMAND LINE= /tmp/evaluation/355253-1176789080/PBS4 /tmp/evaluation/355253-1176789080/instance-355253-1176789080.opb            
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node26/convwatcher-355253-1176789080 -o ROOT/results/node26/conversion-355253-1176789080 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355253-1176789080/instance-355253-1176789080.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node26/watcher-355253-1176789080 -o ROOT/results/node26/solver-355253-1176789080 -C 1800 -W 3600 -M 1800 --output-limit 1,15  /tmp/evaluation/355253-1176789080/PBS4 /tmp/evaluation/355253-1176789080/instance-355253-1176789080.opb            

META MD5SUM SOLVER= b6c24e28fef9e1efa7891be58ea9e46f
MD5SUM BENCH=  9e8d546df5cfe52cfb5a29d8ae802e41

RANDOM SEED= 261338317

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node26.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.213
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.213
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1706272 kB
Buffers:         35956 kB
Cached:         235516 kB
SwapCached:       3384 kB
Active:         157568 kB
Inactive:       138240 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1706272 kB
SwapTotal:     4192956 kB
SwapFree:      4170260 kB
Dirty:           13960 kB
Writeback:           0 kB
Mapped:          31676 kB
Slab:            39492 kB
Committed_AS:   959044 kB
PageTables:       1720 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66510 MiB

End job on node26 on Tue Apr 17 06:21:23 UTC 2007