Trace number 355249

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
glpPB 0.2? (TO) 1800.2 1800.86

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.02.opb
MD5SUM88c0da0b31a99941a4f2c09165ead688
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark44
Best CPU time to get the best result obtained on this benchmark104.421
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 44
Optimality of the best value was proved YES
Number of variables21566
Total number of constraints1314050
Number of constraints which are clauses1310032
Number of constraints which are cardinality constraints (but not clauses)4018
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint164
Number of terms in the objective function 164
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 164
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 162
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 326
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00/0.09	c glpPB 0.2 (July 2006)
0.00/0.09	c An Application of GLPK 4.10 for PB Constraints
0.00/0.09	c Done @ University of Michigan, Ann Arbor, MI
0.00/0.09	c  by Hossein Sheini

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355249-1176788464/instance-355249-1176788464.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node7/watcher-355249-1176788464 -o ROOT/results/node7/solver-355249-1176788464 -C 1800 -W 3600 -M 1800 --output-limit 1,15 glpPBv3 /tmp/evaluation/355249-1176788464/instance-355249-1176788464.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 14327
/proc/meminfo: memFree=1775224/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=18568 CPUtime=0
/proc/14327/stat : 14327 (runsolver) D 14325 14327 13612 0 -1 4194368 17 0 0 0 0 0 0 0 18 0 1 0 154884121 19013632 292 18446744073709551615 4194304 4296420 548682068960 18446744073709551615 244671114535 0 0 4096 24578 18446744071563608240 0 0 17 1 0 0
/proc/14327/statm: 4642 292 257 24 0 2626 0

[startup+0.0558851 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 14327
/proc/meminfo: memFree=1775224/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=1060 CPUtime=0
/proc/14327/stat : 14327 (glpPBv3) D 14325 14327 13612 0 -1 0 50 0 2 0 0 0 0 0 18 0 1 0 154884121 1085440 35 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10417060 0 0 4096 0 18446744071563608240 0 0 17 1 0 0
/proc/14327/statm: 265 35 27 40 0 8 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 1060

[startup+0.101889 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 14327
/proc/meminfo: memFree=1775224/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=2916 CPUtime=0.01
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 307 0 16 0 1 0 0 0 18 0 1 0 154884121 2985984 293 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10882775 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 729 293 199 40 0 144 0
Current children cumulated CPU time (s) 0.01
Current children cumulated vsize (KiB) 2916

[startup+0.301906 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 14327
/proc/meminfo: memFree=1775224/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=5712 CPUtime=0.2
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1010 0 16 0 20 0 0 0 19 0 1 0 154884121 5849088 996 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10882775 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 1428 996 199 40 0 843 0
Current children cumulated CPU time (s) 0.2
Current children cumulated vsize (KiB) 5712

[startup+0.701949 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 14327
/proc/meminfo: memFree=1775224/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=9844 CPUtime=0.6
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 2066 0 16 0 59 1 0 0 23 0 1 0 154884121 10080256 2052 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10815216 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 2461 2054 199 40 0 1876 0
Current children cumulated CPU time (s) 0.6
Current children cumulated vsize (KiB) 9844

[startup+1.50103 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=1762672/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=18236 CPUtime=1.4
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 4158 0 16 0 138 2 0 0 25 0 1 0 154884121 18673664 4144 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10882775 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 4559 4144 199 40 0 3974 0
Current children cumulated CPU time (s) 1.4
Current children cumulated vsize (KiB) 18236

[startup+3.1012 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=1751152/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=34488 CPUtime=3.01
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 8223 0 16 0 295 6 0 0 25 0 1 0 154884121 35315712 8209 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10882775 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 8622 8209 199 40 0 8037 0
Current children cumulated CPU time (s) 3.01
Current children cumulated vsize (KiB) 34488

[startup+6.30154 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=1718704/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=66324 CPUtime=6.2
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 16159 0 16 0 610 10 0 0 25 0 1 0 154884121 67915776 16145 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10882775 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 16581 16145 199 40 0 15996 0
Current children cumulated CPU time (s) 6.2
Current children cumulated vsize (KiB) 66324

[startup+12.7022 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=1654576/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=128400 CPUtime=12.6
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 31678 0 16 0 1243 17 0 0 25 0 1 0 154884121 131481600 31664 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10584162 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 32100 31664 199 40 0 31515 0
Current children cumulated CPU time (s) 12.6
Current children cumulated vsize (KiB) 128400

[startup+25.5015 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=933872/2055920 swapFree=4147100/4192956
[pid=14327] ppid=14325 vsize=841096 CPUtime=25.4
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 235021 0 16 0 2435 105 0 0 25 0 1 0 154884121 861282304 209850 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639282 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 210274 209850 211 40 0 209689 0
Current children cumulated CPU time (s) 25.4
Current children cumulated vsize (KiB) 841096

[startup+51.1012 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824432/2055920 swapFree=4147152/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=50.97
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 302071 0 16 0 4958 139 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 50.97
Current children cumulated vsize (KiB) 950080

[startup+102.306 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824368/2055920 swapFree=4147152/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=102.17
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 343155 0 16 0 10056 161 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134605658 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 102.17
Current children cumulated vsize (KiB) 950080

[startup+162.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824368/2055920 swapFree=4147152/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=162.14
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 394510 0 16 0 16027 187 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643689 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 162.14
Current children cumulated vsize (KiB) 950080

[startup+222.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824304/2055920 swapFree=4147204/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=222.13
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 435594 0 16 0 22005 208 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582224 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 222.13
Current children cumulated vsize (KiB) 950080

[startup+282.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824240/2055920 swapFree=4147204/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=282.11
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 476678 0 16 0 27982 229 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 282.11
Current children cumulated vsize (KiB) 950080

[startup+342.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=783344/2055920 swapFree=4147204/4192956
[pid=14327] ppid=14325 vsize=991164 CPUtime=342.1
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 528033 0 16 0 33955 255 0 0 25 0 1 0 154884121 1014951936 247377 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134638641 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 247791 247377 221 40 0 247206 0
Current children cumulated CPU time (s) 342.1
Current children cumulated vsize (KiB) 991164

[startup+402.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824176/2055920 swapFree=4147256/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=402.09
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 569117 0 16 0 39931 278 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582394 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 402.09
Current children cumulated vsize (KiB) 950080

[startup+462.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824176/2055920 swapFree=4147256/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=462.06
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 610201 0 16 0 45908 298 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134590188 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 462.06
Current children cumulated vsize (KiB) 950080

[startup+522.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824176/2055920 swapFree=4147256/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=522.05
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 651285 0 16 0 51885 320 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643684 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 522.05
Current children cumulated vsize (KiB) 950080

[startup+582.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824112/2055920 swapFree=4147256/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=582.04
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 692369 0 16 0 57863 341 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 582.04
Current children cumulated vsize (KiB) 950080

[startup+642.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=824048/2055920 swapFree=4147316/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=642.03
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 733453 0 16 0 63841 362 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583862 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 642.03
Current children cumulated vsize (KiB) 950080


################
# More data... #
################

[startup+882.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=823920/2055920 swapFree=4147420/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=881.96
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 908060 0 16 0 87744 452 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582424 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 881.96
Current children cumulated vsize (KiB) 950080

[startup+942.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=823856/2055920 swapFree=4147420/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=941.95
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 949144 0 16 0 93722 473 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582410 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 941.95
Current children cumulated vsize (KiB) 950080

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=823856/2055920 swapFree=4147472/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1001.93
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 990228 0 16 0 99698 495 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583862 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1001.93
Current children cumulated vsize (KiB) 950080

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=823792/2055920 swapFree=4147472/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1061.91
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1031312 0 16 0 105675 516 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587128 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1061.91
Current children cumulated vsize (KiB) 950080

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=823728/2055920 swapFree=4147472/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1121.9
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1072396 0 16 0 111651 539 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582412 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1121.9
Current children cumulated vsize (KiB) 950080

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14328
/proc/meminfo: memFree=823600/2055920 swapFree=4147524/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1181.88
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1113480 0 16 0 117628 560 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643589 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1181.88
Current children cumulated vsize (KiB) 950080

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/84 14500
/proc/meminfo: memFree=822272/2055920 swapFree=4147524/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1241.78
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1154564 0 16 0 123597 581 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582412 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1241.78
Current children cumulated vsize (KiB) 950080

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823216/2055920 swapFree=4147524/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1301.76
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1195648 0 16 0 129573 603 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583695 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1301.76
Current children cumulated vsize (KiB) 950080

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823216/2055920 swapFree=4147580/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1361.74
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1236732 0 16 0 135549 625 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134584095 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1361.74
Current children cumulated vsize (KiB) 950080

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823216/2055920 swapFree=4147580/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1421.73
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1277816 0 16 0 141527 646 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1421.73
Current children cumulated vsize (KiB) 950080

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823216/2055920 swapFree=4147580/4192956
[pid=14327] ppid=14325 vsize=991164 CPUtime=1481.71
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1329171 0 16 0 147499 672 0 0 25 0 1 0 154884121 1014951936 247377 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134636120 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 247791 247377 221 40 0 247206 0
Current children cumulated CPU time (s) 1481.71
Current children cumulated vsize (KiB) 991164

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823216/2055920 swapFree=4147636/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1541.69
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1359984 0 16 0 153480 689 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583709 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1541.69
Current children cumulated vsize (KiB) 950080

[startup+1602.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823152/2055920 swapFree=4147636/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1601.68
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1401068 0 16 0 159457 711 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643550 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1601.68
Current children cumulated vsize (KiB) 950080

[startup+1662.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823088/2055920 swapFree=4147636/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1661.66
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1442152 0 16 0 165434 732 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581732 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1661.66
Current children cumulated vsize (KiB) 950080

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823024/2055920 swapFree=4147636/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1721.64
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1483236 0 16 0 171410 754 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583606 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1721.64
Current children cumulated vsize (KiB) 950080

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=823024/2055920 swapFree=4147696/4192956
[pid=14327] ppid=14325 vsize=950080 CPUtime=1781.63
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1524320 0 16 0 177386 777 0 0 25 0 1 0 154884121 972881920 237106 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 237520 237106 221 40 0 236935 0
Current children cumulated CPU time (s) 1781.63
Current children cumulated vsize (KiB) 950080



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.71 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=782128/2055920 swapFree=4147696/4192956
[pid=14327] ppid=14325 vsize=991164 CPUtime=1800.04
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 0 1544862 0 16 0 179217 787 0 0 25 0 1 0 154884121 1014951936 247377 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134580330 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 247791 247377 221 40 0 247206 0
Current children cumulated CPU time (s) 1800.04
Current children cumulated vsize (KiB) 991164

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1800.81 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 14526
/proc/meminfo: memFree=782128/2055920 swapFree=4147696/4192956
[pid=14327] ppid=14325 vsize=0 CPUtime=1800.13
/proc/14327/stat : 14327 (glpPBv3) R 14325 14327 13612 0 -1 1028 1544862 0 16 0 179217 796 0 0 25 0 1 0 154884121 0 0 18446744073709551615 0 0 0 0 0 0 0 4096 0 0 0 0 17 1 0 0
/proc/14327/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 1800.13
Current children cumulated vsize (KiB) 0

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1800.86
CPU time (s): 1800.2
CPU user time (s): 1792.17
CPU system time (s): 8.02178
CPU usage (%): 99.963
Max. virtual memory (cumulated for all children) (KiB): 991164

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1792.17
system time used= 8.02178
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 1544862
page faults= 16
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 45
involuntary context switches= 29352

runsolver used 1.9807 second user time and 4.5773 second system time

The end

Launcher Data (download as text)

Begin job on node7 on Tue Apr 17 05:41:05 UTC 2007

IDJOB= 355249
IDBENCH= 2956
IDSOLVER= 166
FILE ID= node7/355249-1176788464

PBS_JOBID= 4580825

Free space on /tmp= 66340 MiB

SOLVER NAME= glpPB 0.2
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.02.opb
COMMAND LINE= glpPBv3 /tmp/evaluation/355249-1176788464/instance-355249-1176788464.opb
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node7/convwatcher-355249-1176788464 -o ROOT/results/node7/conversion-355249-1176788464 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355249-1176788464/instance-355249-1176788464.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node7/watcher-355249-1176788464 -o ROOT/results/node7/solver-355249-1176788464 -C 1800 -W 3600 -M 1800 --output-limit 1,15  glpPBv3 /tmp/evaluation/355249-1176788464/instance-355249-1176788464.opb

META MD5SUM SOLVER= 9ebec3e8d890fdeefad01654ad9b68b7
MD5SUM BENCH=  88c0da0b31a99941a4f2c09165ead688

RANDOM SEED= 179049245

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node7.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.231
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.231
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1775696 kB
Buffers:         25272 kB
Cached:         172692 kB
SwapCached:      24872 kB
Active:         119880 kB
Inactive:       116608 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1775696 kB
SwapTotal:     4192956 kB
SwapFree:      4147100 kB
Dirty:           48836 kB
Writeback:           0 kB
Mapped:          34668 kB
Slab:            29140 kB
Committed_AS:  7066448 kB
PageTables:       1860 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66340 MiB

End job on node7 on Tue Apr 17 06:11:08 UTC 2007