Trace number 355240

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS4 2007-03-23No Cert. 1800.04 1800.74

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.02.opb
MD5SUM88c0da0b31a99941a4f2c09165ead688
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark44
Best CPU time to get the best result obtained on this benchmark104.421
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 44
Optimality of the best value was proved YES
Number of variables21566
Total number of constraints1314050
Number of constraints which are clauses1310032
Number of constraints which are cardinality constraints (but not clauses)4018
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint164
Number of terms in the objective function 164
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 164
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 162
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 326
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Quality of the solution as a function of time


Download the above graph as a PDF file / as an EPS file

Solver Data (download as text)

0.00/0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00/0.00	c Solving /tmp/evaluation/355240-1176787506/instance-355240-1176787506.opb ......
16.59/16.70	c done parsing opb.
16.59/16.70	o 164
16.68/16.71	o 163
16.68/16.73	o 162
16.68/16.75	o 161
16.68/16.77	o 160
16.68/16.79	o 159
16.79/16.80	o 158
16.79/16.82	o 157
16.79/16.84	o 156
16.79/16.86	o 155
16.79/16.88	o 154
16.79/16.89	o 153
16.88/16.91	o 152
16.88/16.93	o 151
16.88/16.95	o 150
16.88/16.97	o 149
16.88/16.99	o 148
16.98/17.00	o 147
16.98/17.02	o 146
16.98/17.04	o 145
16.98/17.06	o 144
16.98/17.08	o 143
16.98/17.09	o 142
17.09/17.11	o 141
17.09/17.13	o 140
17.09/17.15	o 139
17.09/17.17	o 138
17.09/17.19	o 137
17.18/17.20	o 136
17.18/17.22	o 135
17.18/17.24	o 134
17.18/17.26	o 133
17.18/17.28	o 132
17.18/17.30	o 131
17.29/17.31	o 130
17.29/17.33	o 129
17.29/17.35	o 128
17.29/17.37	o 127
17.29/17.39	o 126
17.38/17.41	o 125
17.38/17.42	o 124
17.38/17.44	o 123
17.38/17.46	o 122
17.38/17.48	o 121
17.38/17.50	o 120
17.49/17.52	o 119
17.49/17.53	o 118
17.49/17.55	o 117
17.49/17.57	o 116
17.49/17.59	o 115
17.58/17.61	o 114
17.58/17.63	o 113
17.58/17.65	o 112
17.58/17.66	o 111
17.58/17.68	o 110
17.68/17.70	o 109
17.68/17.72	o 108
17.68/17.74	o 107
17.68/17.76	o 106
17.68/17.77	o 105
17.68/17.79	o 104
17.79/17.81	o 103
17.79/17.83	o 102
17.79/17.85	o 101
17.79/17.87	o 100
17.79/17.89	o 99
17.88/17.90	o 98
17.88/17.92	o 97
17.88/17.94	o 96
17.88/17.96	o 95
17.88/17.98	o 94
17.98/18.00	o 93
17.98/18.02	o 92
17.98/18.03	o 91
17.98/18.05	o 90
17.98/18.07	o 89
17.98/18.09	o 88
19.18/19.23	o 87
19.49/19.55	o 86
19.58/19.63	o 85
20.18/20.27	o 84
20.58/20.63	o 83
20.58/20.65	o 82
20.58/20.68	o 81
20.78/20.88	o 80
29.98/30.00	o 79
94.14/94.28	o 78
127.53/127.69	o 77
233.09/233.21	o 76
276.18/276.35	o 75
339.45/339.66	o 74
355.65/355.88	o 73
439.01/439.28	o 72
493.99/494.28	o 71
568.66/568.93	o 70
693.32/693.60	o 69
693.82/694.12	o 68
989.30/989.76	o 67
1800.01/1800.71	s SATISFIABLE

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355240-1176787506/instance-355240-1176787506.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node20/watcher-355240-1176787506 -o ROOT/results/node20/solver-355240-1176787506 -C 1800 -W 3600 -M 1800 --output-limit 1,15 /tmp/evaluation/355240-1176787506/PBS4 /tmp/evaluation/355240-1176787506/instance-355240-1176787506.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 10092
/proc/meminfo: memFree=1791272/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=3348 CPUtime=0
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 513 0 0 0 0 0 0 0 18 0 1 0 126667973 3428352 495 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134573157 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 837 498 81 219 0 614 0

[startup+0.0897161 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 10092
/proc/meminfo: memFree=1791272/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=5756 CPUtime=0.08
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 1324 0 0 0 8 0 0 0 18 0 1 0 126667973 5894144 1208 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135057389 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 1439 1208 88 219 0 1216 0
Current children cumulated CPU time (s) 0.08
Current children cumulated vsize (KiB) 5756

[startup+0.101717 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 10092
/proc/meminfo: memFree=1791272/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=5836 CPUtime=0.09
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 1361 0 0 0 9 0 0 0 18 0 1 0 126667973 5976064 1245 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 1459 1245 88 219 0 1236 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 5836

[startup+0.301757 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 10092
/proc/meminfo: memFree=1791272/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=7332 CPUtime=0.29
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 1750 0 0 0 29 0 0 0 19 0 1 0 126667973 7507968 1488 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134529775 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 1833 1488 89 219 0 1610 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 7332

[startup+0.701838 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 10092
/proc/meminfo: memFree=1791272/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=9520 CPUtime=0.69
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 2490 0 0 0 68 1 0 0 22 0 1 0 126667973 9748480 2035 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135006597 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 2380 2035 89 219 0 2157 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 9520

[startup+1.502 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1781600/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=14028 CPUtime=1.49
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 3972 0 0 0 147 2 0 0 25 0 1 0 126667973 14364672 3132 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135006597 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 3507 3132 89 219 0 3284 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 14028

[startup+3.10132 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1775776/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=23044 CPUtime=3.09
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 6988 0 0 0 305 4 0 0 25 0 1 0 126667973 23597056 5379 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 5761 5379 89 219 0 5538 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 23044

[startup+6.30196 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1758880/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=39512 CPUtime=6.28
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 12537 0 0 0 619 9 0 0 25 0 1 0 126667973 40460288 9391 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 9878 9391 89 219 0 9655 0
Current children cumulated CPU time (s) 6.28
Current children cumulated vsize (KiB) 39512

[startup+12.7012 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1722664/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=75760 CPUtime=12.69
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 24429 0 0 0 1252 17 0 0 25 0 1 0 126667973 77578240 18210 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134518633 0 0 4096 0 0 0 0 17 1 0 0
/proc/10092/statm: 18940 18210 89 219 0 18717 0
Current children cumulated CPU time (s) 12.69
Current children cumulated vsize (KiB) 75760

[startup+25.5018 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1696872/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=137796 CPUtime=25.48
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 36244 0 0 0 2504 44 0 0 25 0 1 0 126667973 141103104 23794 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547308 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 34449 23794 104 219 0 34226 0
Current children cumulated CPU time (s) 25.48
Current children cumulated vsize (KiB) 137796

[startup+51.1019 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1689640/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=139528 CPUtime=51.06
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 38278 0 0 0 5035 71 0 0 25 0 1 0 126667973 142876672 25570 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 34882 25570 104 219 0 34659 0
Current children cumulated CPU time (s) 51.06
Current children cumulated vsize (KiB) 139528

[startup+102.305 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1682600/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=140836 CPUtime=102.25
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 40776 0 0 0 10108 117 0 0 25 0 1 0 126667973 144216064 27380 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 35209 27380 104 219 0 34986 0
Current children cumulated CPU time (s) 102.25
Current children cumulated vsize (KiB) 140836

[startup+162.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1674600/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=141756 CPUtime=162.22
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 43380 0 0 0 16054 168 0 0 25 0 1 0 126667973 145158144 29296 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 35439 29296 104 219 0 35216 0
Current children cumulated CPU time (s) 162.22
Current children cumulated vsize (KiB) 141756

[startup+222.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1672360/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=142184 CPUtime=222.2
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 44527 0 0 0 21999 221 0 0 25 0 1 0 126667973 145596416 29841 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 35546 29841 104 219 0 35323 0
Current children cumulated CPU time (s) 222.2
Current children cumulated vsize (KiB) 142184

[startup+282.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1671528/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=142932 CPUtime=282.17
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 45380 0 0 0 27949 268 0 0 25 0 1 0 126667973 146362368 30049 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 35733 30049 104 219 0 35510 0
Current children cumulated CPU time (s) 282.17
Current children cumulated vsize (KiB) 142932

[startup+342.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1670824/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=143196 CPUtime=342.15
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 46091 0 0 0 33906 309 0 0 25 0 1 0 126667973 146632704 30201 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 35799 30201 104 219 0 35576 0
Current children cumulated CPU time (s) 342.15
Current children cumulated vsize (KiB) 143196

[startup+402.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1666408/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=143724 CPUtime=402.13
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 47716 0 0 0 39867 346 0 0 25 0 1 0 126667973 147173376 31353 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 35931 31353 104 219 0 35708 0
Current children cumulated CPU time (s) 402.13
Current children cumulated vsize (KiB) 143724

[startup+462.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1663976/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=209528 CPUtime=462.1
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 48708 0 0 0 45828 382 0 0 25 0 1 0 126667973 214556672 31872 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 52382 31872 104 219 0 52159 0
Current children cumulated CPU time (s) 462.1
Current children cumulated vsize (KiB) 209528

[startup+522.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1663528/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=209876 CPUtime=522.08
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 49288 0 0 0 51787 421 0 0 25 0 1 0 126667973 214913024 31979 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 52469 31979 104 219 0 52246 0
Current children cumulated CPU time (s) 522.08
Current children cumulated vsize (KiB) 209876

[startup+582.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1659816/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=210132 CPUtime=582.06
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 50660 0 0 0 57751 455 0 0 25 0 1 0 126667973 215175168 32964 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547106 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 52533 32964 104 219 0 52310 0
Current children cumulated CPU time (s) 582.06
Current children cumulated vsize (KiB) 210132

[startup+642.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10093
/proc/meminfo: memFree=1657064/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=210624 CPUtime=642.03
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 51660 0 0 0 63718 485 0 0 25 0 1 0 126667973 215678976 33577 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 52656 33577 104 219 0 52433 0
Current children cumulated CPU time (s) 642.03
Current children cumulated vsize (KiB) 210624


################
# More data... #
################

[startup+882.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1644072/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=212076 CPUtime=881.94
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 56342 0 0 0 87586 608 0 0 25 0 1 0 126667973 217165824 36711 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53019 36711 104 219 0 52796 0
Current children cumulated CPU time (s) 881.94
Current children cumulated vsize (KiB) 212076

[startup+942.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1643752/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=212352 CPUtime=941.92
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 56799 0 0 0 93551 641 0 0 25 0 1 0 126667973 217448448 36781 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53088 36781 104 219 0 52865 0
Current children cumulated CPU time (s) 941.92
Current children cumulated vsize (KiB) 212352

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1643304/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=212484 CPUtime=1001.9
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 57271 0 0 0 99522 668 0 0 25 0 1 0 126667973 217583616 36866 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547123 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53121 36866 104 219 0 52898 0
Current children cumulated CPU time (s) 1001.9
Current children cumulated vsize (KiB) 212484

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1642856/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=212616 CPUtime=1061.87
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 57705 0 0 0 105494 693 0 0 25 0 1 0 126667973 217718784 36956 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547371 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53154 36956 104 219 0 52931 0
Current children cumulated CPU time (s) 1061.87
Current children cumulated vsize (KiB) 212616

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1642472/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=212748 CPUtime=1121.85
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 58166 0 0 0 111466 719 0 0 25 0 1 0 126667973 217853952 37030 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53187 37030 104 219 0 52964 0
Current children cumulated CPU time (s) 1121.85
Current children cumulated vsize (KiB) 212748

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1641896/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=213040 CPUtime=1181.83
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 58667 0 0 0 117440 743 0 0 25 0 1 0 126667973 218152960 37144 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53260 37144 104 219 0 53037 0
Current children cumulated CPU time (s) 1181.83
Current children cumulated vsize (KiB) 213040

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1641448/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=213172 CPUtime=1241.81
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 59128 0 0 0 123410 771 0 0 25 0 1 0 126667973 218288128 37218 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53293 37218 104 219 0 53070 0
Current children cumulated CPU time (s) 1241.81
Current children cumulated vsize (KiB) 213172

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1640936/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=213616 CPUtime=1301.79
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 59584 0 0 0 129382 797 0 0 25 0 1 0 126667973 218742784 37330 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53404 37330 104 219 0 53181 0
Current children cumulated CPU time (s) 1301.79
Current children cumulated vsize (KiB) 213616

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1640552/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=213756 CPUtime=1361.76
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 60000 0 0 0 135356 820 0 0 25 0 1 0 126667973 218886144 37402 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53439 37402 104 219 0 53216 0
Current children cumulated CPU time (s) 1361.76
Current children cumulated vsize (KiB) 213756

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1639976/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=214220 CPUtime=1421.74
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 60461 0 0 0 141330 844 0 0 25 0 1 0 126667973 219361280 37519 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547371 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53555 37519 104 219 0 53332 0
Current children cumulated CPU time (s) 1421.74
Current children cumulated vsize (KiB) 214220

[startup+1482.3 s]
/proc/loadavg: 1.03 1.01 1.00 2/78 10095
/proc/meminfo: memFree=1638312/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=214220 CPUtime=1481.71
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 61281 0 0 0 147302 869 0 0 25 0 1 0 126667973 219361280 37952 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53555 37952 104 219 0 53332 0
Current children cumulated CPU time (s) 1481.71
Current children cumulated vsize (KiB) 214220

[startup+1542.3 s]
/proc/loadavg: 1.01 1.01 1.00 2/78 10095
/proc/meminfo: memFree=1637800/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=214352 CPUtime=1541.69
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 61804 0 0 0 153279 890 0 0 25 0 1 0 126667973 219496448 38045 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53588 38045 104 219 0 53365 0
Current children cumulated CPU time (s) 1541.69
Current children cumulated vsize (KiB) 214352

[startup+1602.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1637480/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=214704 CPUtime=1601.67
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 62216 0 0 0 159254 913 0 0 25 0 1 0 126667973 219856896 38113 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53676 38113 104 219 0 53453 0
Current children cumulated CPU time (s) 1601.67
Current children cumulated vsize (KiB) 214704

[startup+1662.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1637224/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=214836 CPUtime=1661.65
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 62568 0 0 0 165233 932 0 0 25 0 1 0 126667973 219992064 38164 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53709 38164 104 219 0 53486 0
Current children cumulated CPU time (s) 1661.65
Current children cumulated vsize (KiB) 214836

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1636712/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=214836 CPUtime=1721.62
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 63012 0 0 0 171207 955 0 0 25 0 1 0 126667973 219992064 38264 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53709 38264 104 219 0 53486 0
Current children cumulated CPU time (s) 1721.62
Current children cumulated vsize (KiB) 214836

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1636200/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=215340 CPUtime=1781.6
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 63444 0 0 0 177183 977 0 0 25 0 1 0 126667973 220508160 38352 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53835 38352 104 219 0 53612 0
Current children cumulated CPU time (s) 1781.6
Current children cumulated vsize (KiB) 215340



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.71 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1636072/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=215340 CPUtime=1800.01
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 63587 0 0 0 179017 984 0 0 25 0 1 0 126667973 220508160 38366 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53835 38366 104 219 0 53612 0
Current children cumulated CPU time (s) 1800.01
Current children cumulated vsize (KiB) 215340

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1800.71 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 10095
/proc/meminfo: memFree=1636072/2055920 swapFree=4128600/4192956
[pid=10092] ppid=10090 vsize=215340 CPUtime=1800.01
/proc/10092/stat : 10092 (PBS4) R 10090 10092 9792 0 -1 4194304 63587 0 0 0 179017 984 0 0 25 0 1 0 126667973 220508160 38366 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/10092/statm: 53835 38366 104 219 0 53612 0
Current children cumulated CPU time (s) 1800.01
Current children cumulated vsize (KiB) 215340

Child status: 0
Real time (s): 1800.74
CPU time (s): 1800.04
CPU user time (s): 1790.17
CPU system time (s): 9.8665
CPU usage (%): 99.9612
Max. virtual memory (cumulated for all children) (KiB): 215340

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1790.17
system time used= 9.8665
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 63588
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 9
involuntary context switches= 2871

runsolver used 2.11668 second user time and 4.42133 second system time

The end

Launcher Data (download as text)

Begin job on node20 on Tue Apr 17 05:25:06 UTC 2007

IDJOB= 355240
IDBENCH= 2956
IDSOLVER= 157
FILE ID= node20/355240-1176787506

PBS_JOBID= 4580845

Free space on /tmp= 66459 MiB

SOLVER NAME= PBS4 2007-03-23
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.02.opb
COMMAND LINE= /tmp/evaluation/355240-1176787506/PBS4 /tmp/evaluation/355240-1176787506/instance-355240-1176787506.opb            
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node20/convwatcher-355240-1176787506 -o ROOT/results/node20/conversion-355240-1176787506 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355240-1176787506/instance-355240-1176787506.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node20/watcher-355240-1176787506 -o ROOT/results/node20/solver-355240-1176787506 -C 1800 -W 3600 -M 1800 --output-limit 1,15  /tmp/evaluation/355240-1176787506/PBS4 /tmp/evaluation/355240-1176787506/instance-355240-1176787506.opb            

META MD5SUM SOLVER= b6c24e28fef9e1efa7891be58ea9e46f
MD5SUM BENCH=  88c0da0b31a99941a4f2c09165ead688

RANDOM SEED= 331591299

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node20.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.265
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.265
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1791680 kB
Buffers:         12596 kB
Cached:         194672 kB
SwapCached:      20056 kB
Active:         102180 kB
Inactive:       131992 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1791680 kB
SwapTotal:     4192956 kB
SwapFree:      4128600 kB
Dirty:           47656 kB
Writeback:           0 kB
Mapped:          31996 kB
Slab:            15604 kB
Committed_AS:  1805580 kB
PageTables:       1744 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66459 MiB

End job on node20 on Tue Apr 17 05:55:09 UTC 2007