Trace number 355210

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
glpPB 0.2? (TO) 1800.21 1800.85

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.07.opb
MD5SUM7a51facc2b0ceeb02915874508a30079
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark37
Best CPU time to get the best result obtained on this benchmark99.9348
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 37
Optimality of the best value was proved YES
Number of variables21756
Total number of constraints1266468
Number of constraints which are clauses1262688
Number of constraints which are cardinality constraints (but not clauses)3780
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint168
Number of terms in the objective function 168
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 168
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 166
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 334
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00/0.00	c glpPB 0.2 (July 2006)
0.00/0.00	c An Application of GLPK 4.10 for PB Constraints
0.00/0.00	c Done @ University of Michigan, Ann Arbor, MI
0.00/0.00	c  by Hossein Sheini

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355210-1176783273/instance-355210-1176783273.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node46/watcher-355210-1176783273 -o ROOT/results/node46/solver-355210-1176783273 -C 1800 -W 3600 -M 1800 --output-limit 1,15 glpPBv3 /tmp/evaluation/355210-1176783273/instance-355210-1176783273.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.96 1.00 1.00 3/78 3328
/proc/meminfo: memFree=1447104/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=1200 CPUtime=0
/proc/3328/stat : 3328 (glpPBv3) D 3326 3328 1496 0 -1 0 56 0 0 0 0 0 0 0 18 0 1 0 33010292 1228800 39 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 7795492 0 2147483391 4096 0 18446744072099781622 0 0 17 1 0 0
/proc/3328/statm: 300 39 30 40 0 8 0

[startup+0.03006 s]
/proc/loadavg: 0.96 1.00 1.00 3/78 3328
/proc/meminfo: memFree=1447104/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=3316 CPUtime=0.02
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 434 0 0 0 2 0 0 0 18 0 1 0 33010292 3395584 404 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8230523 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 829 404 199 40 0 244 0
Current children cumulated CPU time (s) 0.02
Current children cumulated vsize (KiB) 3316

[startup+0.101073 s]
/proc/loadavg: 0.96 1.00 1.00 3/78 3328
/proc/meminfo: memFree=1447104/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=4380 CPUtime=0.09
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 705 0 0 0 9 0 0 0 18 0 1 0 33010292 4485120 675 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8255260 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 1095 675 199 40 0 510 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 4380

[startup+0.30111 s]
/proc/loadavg: 0.96 1.00 1.00 3/78 3328
/proc/meminfo: memFree=1447104/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=6512 CPUtime=0.29
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1236 0 0 0 29 0 0 0 19 0 1 0 33010292 6668288 1206 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 4294960144 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 1628 1206 199 40 0 1043 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 6512

[startup+0.701185 s]
/proc/loadavg: 0.96 1.00 1.00 3/78 3328
/proc/meminfo: memFree=1447104/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=10776 CPUtime=0.69
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 2301 0 0 0 68 1 0 0 23 0 1 0 33010292 11034624 2271 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8261335 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 2694 2271 199 40 0 2109 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 10776

[startup+1.50133 s]
/proc/loadavg: 0.96 1.00 1.00 2/79 3329
/proc/meminfo: memFree=1435512/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=19168 CPUtime=1.49
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 4403 0 0 0 147 2 0 0 25 0 1 0 33010292 19628032 4373 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8261335 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 4792 4373 199 40 0 4207 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 19168

[startup+3.10164 s]
/proc/loadavg: 0.96 1.00 1.00 2/79 3329
/proc/meminfo: memFree=1423992/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=35684 CPUtime=3.08
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 8547 0 0 0 306 2 0 0 25 0 1 0 33010292 36540416 8517 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134530899 0 0 4096 0 0 0 0 17 0 0 0
/proc/3328/statm: 8921 8517 199 40 0 8336 0
Current children cumulated CPU time (s) 3.08
Current children cumulated vsize (KiB) 35684

[startup+6.30123 s]
/proc/loadavg: 1.04 1.02 1.00 2/79 3329
/proc/meminfo: memFree=1390328/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=67788 CPUtime=6.28
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 16547 0 0 0 619 9 0 0 25 0 1 0 33010292 69414912 16517 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134521264 0 0 4096 0 0 0 0 17 0 0 0
/proc/3328/statm: 16947 16517 199 40 0 16362 0
Current children cumulated CPU time (s) 6.28
Current children cumulated vsize (KiB) 67788

[startup+12.7014 s]
/proc/loadavg: 1.04 1.02 1.00 2/79 3329
/proc/meminfo: memFree=1326208/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=130400 CPUtime=12.67
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 32211 0 0 0 1249 18 0 0 25 0 1 0 33010292 133529600 32181 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8261335 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 32600 32181 199 40 0 32015 0
Current children cumulated CPU time (s) 12.67
Current children cumulated vsize (KiB) 130400

[startup+25.5018 s]
/proc/loadavg: 1.03 1.01 1.00 2/79 3329
/proc/meminfo: memFree=676480/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=842392 CPUtime=25.47
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 244489 0 0 0 2433 114 0 0 25 0 1 0 33010292 862609408 210195 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582410 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 210598 210195 220 40 0 210013 0
Current children cumulated CPU time (s) 25.47
Current children cumulated vsize (KiB) 842392

[startup+51.1015 s]
/proc/loadavg: 1.02 1.01 1.00 2/79 3329
/proc/meminfo: memFree=492288/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=956188 CPUtime=51.04
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 301389 0 0 0 4963 141 0 0 25 0 1 0 33010292 979136512 238645 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639282 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 239047 238645 221 40 0 238462 0
Current children cumulated CPU time (s) 51.04
Current children cumulated vsize (KiB) 956188

[startup+102.306 s]
/proc/loadavg: 1.01 1.01 1.00 2/79 3329
/proc/meminfo: memFree=531712/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=102.22
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 331077 0 0 0 10066 156 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643256 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 102.22
Current children cumulated vsize (KiB) 916604

[startup+162.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531712/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=162.2
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 380557 0 0 0 16038 182 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643687 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 162.2
Current children cumulated vsize (KiB) 916604

[startup+222.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=492288/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=956188 CPUtime=222.18
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 430037 0 0 0 22012 206 0 0 25 0 1 0 33010292 979136512 238645 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639282 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 239047 238645 221 40 0 238462 0
Current children cumulated CPU time (s) 222.18
Current children cumulated vsize (KiB) 956188

[startup+282.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531648/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=282.16
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 469621 0 0 0 27989 227 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582419 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 282.16
Current children cumulated vsize (KiB) 916604

[startup+342.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531648/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=342.14
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 509205 0 0 0 33967 247 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583691 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 342.14
Current children cumulated vsize (KiB) 916604

[startup+402.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531648/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=956188 CPUtime=402.12
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 558685 0 0 0 39941 271 0 0 25 0 1 0 33010292 979136512 238645 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134636120 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 239047 238645 221 40 0 238462 0
Current children cumulated CPU time (s) 402.12
Current children cumulated vsize (KiB) 956188

[startup+462.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531712/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=462.1
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 598269 0 0 0 45918 292 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589633 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 462.1
Current children cumulated vsize (KiB) 916604

[startup+522.303 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531712/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=522.08
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 637853 0 0 0 51895 313 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581813 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 522.08
Current children cumulated vsize (KiB) 916604

[startup+582.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531712/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=582.06
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 677437 0 0 0 57873 333 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643170 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 582.06
Current children cumulated vsize (KiB) 916604

[startup+642.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531712/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=642.04
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 717021 0 0 0 63851 353 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643172 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 642.04
Current children cumulated vsize (KiB) 916604


################
# More data... #
################

[startup+882.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531648/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=881.96
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 875357 0 0 0 87763 433 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643687 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 881.96
Current children cumulated vsize (KiB) 916604

[startup+942.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=941.94
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 914941 0 0 0 93739 455 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 941.94
Current children cumulated vsize (KiB) 916604

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1001.92
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 954525 0 0 0 99717 475 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582426 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1001.92
Current children cumulated vsize (KiB) 916604

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531648/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1061.9
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 994109 0 0 0 105696 494 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643580 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1061.9
Current children cumulated vsize (KiB) 916604

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1121.88
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1033693 0 0 0 111674 514 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582224 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1121.88
Current children cumulated vsize (KiB) 916604

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3329
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1181.86
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1073277 0 0 0 117651 535 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1181.86
Current children cumulated vsize (KiB) 916604

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531456/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1241.84
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1112861 0 0 0 123628 556 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643580 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1241.84
Current children cumulated vsize (KiB) 916604

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1301.82
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1152445 0 0 0 129607 575 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583695 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1301.82
Current children cumulated vsize (KiB) 916604

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=492224/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1361.8
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1192029 0 0 0 135584 596 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587144 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1361.8
Current children cumulated vsize (KiB) 916604

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=492224/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=956188 CPUtime=1421.79
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1231613 0 0 0 141563 616 0 0 25 0 1 0 33010292 979136512 238645 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639272 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 239047 238645 221 40 0 238462 0
Current children cumulated CPU time (s) 1421.79
Current children cumulated vsize (KiB) 956188

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1481.76
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1261301 0 0 0 147544 632 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1481.76
Current children cumulated vsize (KiB) 916604

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531648/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1541.74
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1300885 0 0 0 153522 652 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134584210 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1541.74
Current children cumulated vsize (KiB) 916604

[startup+1602.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1601.71
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1340469 0 0 0 159499 672 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643620 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1601.71
Current children cumulated vsize (KiB) 916604

[startup+1662.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1661.69
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1380053 0 0 0 165476 693 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134607309 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1661.69
Current children cumulated vsize (KiB) 916604

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531584/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1721.68
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1419637 0 0 0 171454 714 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589605 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1721.68
Current children cumulated vsize (KiB) 916604

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531520/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1781.66
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1459221 0 0 0 177433 733 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581963 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1781.66
Current children cumulated vsize (KiB) 916604



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.71 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531520/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=916604 CPUtime=1800.06
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 0 1469117 0 0 0 179268 738 0 0 25 0 1 0 33010292 938602496 228749 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643620 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 229151 228749 221 40 0 228566 0
Current children cumulated CPU time (s) 1800.06
Current children cumulated vsize (KiB) 916604

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1800.81 s]
/proc/loadavg: 1.00 1.00 1.00 2/79 3331
/proc/meminfo: memFree=531520/2055920 swapFree=4184556/4192956
[pid=3328] ppid=3326 vsize=0 CPUtime=1800.16
/proc/3328/stat : 3328 (glpPBv3) R 3326 3328 1496 0 -1 1028 1469117 0 0 0 179268 748 0 0 25 0 1 0 33010292 0 0 18446744073709551615 0 0 0 0 0 0 0 4096 0 0 0 0 17 1 0 0
/proc/3328/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 1800.16
Current children cumulated vsize (KiB) 0

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1800.85
CPU time (s): 1800.21
CPU user time (s): 1792.68
CPU system time (s): 7.52585
CPU usage (%): 99.9641
Max. virtual memory (cumulated for all children) (KiB): 956188

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1792.68
system time used= 7.52585
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 1469117
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 12
involuntary context switches= 2179

runsolver used 1.77073 second user time and 4.79027 second system time

The end

Launcher Data (download as text)

Begin job on node46 on Tue Apr 17 04:14:33 UTC 2007

IDJOB= 355210
IDBENCH= 2953
IDSOLVER= 166
FILE ID= node46/355210-1176783273

PBS_JOBID= 4580804

Free space on /tmp= 66112 MiB

SOLVER NAME= glpPB 0.2
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.07.opb
COMMAND LINE= glpPBv3 /tmp/evaluation/355210-1176783273/instance-355210-1176783273.opb
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node46/convwatcher-355210-1176783273 -o ROOT/results/node46/conversion-355210-1176783273 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355210-1176783273/instance-355210-1176783273.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node46/watcher-355210-1176783273 -o ROOT/results/node46/solver-355210-1176783273 -C 1800 -W 3600 -M 1800 --output-limit 1,15  glpPBv3 /tmp/evaluation/355210-1176783273/instance-355210-1176783273.opb

META MD5SUM SOLVER= 9ebec3e8d890fdeefad01654ad9b68b7
MD5SUM BENCH=  7a51facc2b0ceeb02915874508a30079

RANDOM SEED= 832233703

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node46.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.268
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5931.00
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.268
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1447512 kB
Buffers:         41348 kB
Cached:         362096 kB
SwapCached:       3060 kB
Active:         354744 kB
Inactive:       197516 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1447512 kB
SwapTotal:     4192956 kB
SwapFree:      4184556 kB
Dirty:           47272 kB
Writeback:           0 kB
Mapped:         163532 kB
Slab:            41540 kB
Committed_AS:  1913192 kB
PageTables:       1960 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66112 MiB

End job on node46 on Tue Apr 17 04:44:36 UTC 2007