Trace number 355188

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS4 2007-03-23No Cert. 1800.07 1800.53

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.11.opb
MD5SUM5f844d3fbd9d157e56bab6c09ee5f179
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark38
Best CPU time to get the best result obtained on this benchmark101.124
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 38
Optimality of the best value was proved YES
Number of variables21675
Total number of constraints1210400
Number of constraints which are clauses1206830
Number of constraints which are cardinality constraints (but not clauses)3570
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint170
Number of terms in the objective function 170
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 170
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 168
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 338
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Quality of the solution as a function of time


Download the above graph as a PDF file / as an EPS file

Solver Data (download as text)

0.00/0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00/0.00	c Solving /tmp/evaluation/355188-1176779827/instance-355188-1176779827.opb ......
15.29/15.37	c done parsing opb.
15.29/15.37	o 170
15.29/15.38	o 169
15.39/15.40	o 168
15.39/15.42	o 167
15.39/15.44	o 166
15.39/15.46	o 165
15.39/15.47	o 164
15.39/15.49	o 163
15.48/15.51	o 162
15.48/15.53	o 161
15.48/15.55	o 160
15.48/15.56	o 159
15.48/15.58	o 158
15.59/15.60	o 157
15.59/15.62	o 156
15.59/15.63	o 155
15.59/15.65	o 154
15.59/15.67	o 153
15.59/15.69	o 152
15.68/15.71	o 151
15.68/15.72	o 150
15.68/15.74	o 149
15.68/15.76	o 148
15.68/15.78	o 147
15.68/15.80	o 146
15.79/15.81	o 145
15.79/15.83	o 144
15.79/15.85	o 143
15.79/15.87	o 142
15.79/15.89	o 141
15.89/15.90	o 140
15.89/15.92	o 139
15.89/15.94	o 138
15.89/15.96	o 137
15.89/15.98	o 136
15.89/15.99	o 135
15.98/16.01	o 134
15.98/16.03	o 133
15.98/16.05	o 132
15.98/16.07	o 131
15.98/16.08	o 130
16.08/16.10	o 129
16.08/16.12	o 128
16.08/16.14	o 127
16.08/16.16	o 126
16.08/16.18	o 125
16.08/16.19	o 124
16.19/16.21	o 123
16.19/16.23	o 122
16.19/16.25	o 121
16.19/16.27	o 120
16.19/16.29	o 119
16.28/16.30	o 118
16.28/16.32	o 117
16.28/16.34	o 116
16.28/16.36	o 115
16.28/16.38	o 114
16.28/16.39	o 113
16.39/16.41	o 112
16.39/16.43	o 111
16.39/16.45	o 110
16.39/16.47	o 109
16.39/16.48	o 108
16.49/16.50	o 107
16.49/16.52	o 106
16.49/16.54	o 105
16.49/16.56	o 104
16.49/16.58	o 103
16.49/16.59	o 102
16.59/16.61	o 101
16.59/16.63	o 100
16.59/16.65	o 99
16.59/16.67	o 98
16.59/16.69	o 97
16.69/16.70	o 96
16.69/16.72	o 95
16.69/16.74	o 94
16.69/16.76	o 93
16.69/16.78	o 92
16.69/16.80	o 91
17.88/17.94	o 90
18.19/18.24	o 89
18.48/18.54	o 88
18.68/18.74	o 87
18.78/18.80	o 86
18.99/19.05	o 85
18.99/19.08	o 84
19.38/19.49	o 83
19.78/19.87	o 82
20.08/20.15	o 81
20.18/20.30	o 80
20.38/20.43	o 79
20.48/20.51	o 78
20.58/20.69	o 77
21.48/21.51	o 76
21.78/21.85	o 75
21.89/21.91	o 74
385.98/386.11	o 73
525.04/525.25	o 72
529.64/529.80	o 71
866.66/866.93	o 70
893.45/893.74	o 69
1756.15/1756.66	o 68
1800.03/1800.50	s SATISFIABLE

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355188-1176779827/instance-355188-1176779827.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node15/watcher-355188-1176779827 -o ROOT/results/node15/solver-355188-1176779827 -C 1800 -W 3600 -M 1800 --output-limit 1,15 /tmp/evaluation/355188-1176779827/PBS4 /tmp/evaluation/355188-1176779827/instance-355188-1176779827.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.99 0.98 0.99 2/77 28785
/proc/meminfo: memFree=1843056/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=3360 CPUtime=0
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 301 0 0 0 0 0 0 0 18 0 1 0 125900353 3440640 283 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134572935 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 840 287 81 219 0 617 0

[startup+0.0531411 s]
/proc/loadavg: 0.99 0.98 0.99 2/77 28785
/proc/meminfo: memFree=1843056/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=5568 CPUtime=0.04
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 1236 0 0 0 4 0 0 0 18 0 1 0 125900353 5701632 1120 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134589497 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 1392 1120 88 219 0 1169 0
Current children cumulated CPU time (s) 0.04
Current children cumulated vsize (KiB) 5568

[startup+0.101144 s]
/proc/loadavg: 0.99 0.98 0.99 2/77 28785
/proc/meminfo: memFree=1843056/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=5764 CPUtime=0.09
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 1344 0 0 0 9 0 0 0 18 0 1 0 125900353 5902336 1218 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 1441 1218 88 219 0 1218 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 5764

[startup+0.301163 s]
/proc/loadavg: 0.99 0.98 0.99 2/77 28785
/proc/meminfo: memFree=1843056/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=7252 CPUtime=0.28
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 1741 0 0 0 28 0 0 0 19 0 1 0 125900353 7426048 1469 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134529775 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 1813 1470 89 219 0 1590 0
Current children cumulated CPU time (s) 0.28
Current children cumulated vsize (KiB) 7252

[startup+0.7012 s]
/proc/loadavg: 0.99 0.98 0.99 2/77 28785
/proc/meminfo: memFree=1843056/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=9704 CPUtime=0.69
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 2551 0 0 0 68 1 0 0 23 0 1 0 125900353 9936896 2086 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 2426 2086 89 219 0 2203 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 9704

[startup+1.50127 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1833384/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=13948 CPUtime=1.48
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 3993 0 0 0 147 1 0 0 25 0 1 0 125900353 14282752 3143 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134529912 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 3487 3143 89 219 0 3264 0
Current children cumulated CPU time (s) 1.48
Current children cumulated vsize (KiB) 13948

[startup+3.10142 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1827496/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=23140 CPUtime=3.09
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 7012 0 0 0 306 3 0 0 25 0 1 0 125900353 23695360 5393 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 5785 5393 89 219 0 5562 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 23140

[startup+6.30171 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1810280/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=39756 CPUtime=6.28
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 12635 0 0 0 623 5 0 0 25 0 1 0 125900353 40710144 9479 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135022993 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 9939 9479 89 219 0 9716 0
Current children cumulated CPU time (s) 6.28
Current children cumulated vsize (KiB) 39756

[startup+12.7013 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1773936/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=76208 CPUtime=12.68
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 24563 0 0 0 1256 12 0 0 25 0 1 0 125900353 78036992 18334 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134596339 0 0 4096 0 0 0 0 17 1 0 0
/proc/28785/statm: 19052 18334 89 219 0 18829 0
Current children cumulated CPU time (s) 12.68
Current children cumulated vsize (KiB) 76208

[startup+25.5015 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1754288/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=137368 CPUtime=25.48
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 34830 0 0 0 2511 37 0 0 25 0 1 0 125900353 140664832 22370 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 34342 22370 104 219 0 34119 0
Current children cumulated CPU time (s) 25.48
Current children cumulated vsize (KiB) 137368

[startup+51.1018 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1748080/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=138956 CPUtime=51.06
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 36569 0 0 0 5037 69 0 0 25 0 1 0 125900353 142290944 23894 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 34739 23894 104 219 0 34516 0
Current children cumulated CPU time (s) 51.06
Current children cumulated vsize (KiB) 138956

[startup+102.306 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1744240/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=140316 CPUtime=102.25
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 37973 0 0 0 10104 121 0 0 25 0 1 0 125900353 143683584 24868 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 35079 24868 104 219 0 34856 0
Current children cumulated CPU time (s) 102.25
Current children cumulated vsize (KiB) 140316

[startup+162.301 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1739440/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=141852 CPUtime=162.23
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 39657 0 0 0 16039 184 0 0 25 0 1 0 125900353 145256448 26036 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 35463 26036 104 219 0 35240 0
Current children cumulated CPU time (s) 162.23
Current children cumulated vsize (KiB) 141852

[startup+222.302 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1737712/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=142704 CPUtime=222.22
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 40629 0 0 0 21983 239 0 0 25 0 1 0 125900353 146128896 26492 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 35676 26492 104 219 0 35453 0
Current children cumulated CPU time (s) 222.22
Current children cumulated vsize (KiB) 142704

[startup+282.301 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1734640/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=143140 CPUtime=282.2
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 41857 0 0 0 27930 290 0 0 25 0 1 0 125900353 146575360 27204 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 35785 27204 104 219 0 35562 0
Current children cumulated CPU time (s) 282.2
Current children cumulated vsize (KiB) 143140

[startup+342.302 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1733296/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=143712 CPUtime=342.19
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 42653 0 0 0 33877 342 0 0 25 0 1 0 125900353 147161088 27527 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 35928 27527 104 219 0 35705 0
Current children cumulated CPU time (s) 342.19
Current children cumulated vsize (KiB) 143712

[startup+402.301 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1729648/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=143972 CPUtime=402.17
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 44041 0 0 0 39825 392 0 0 25 0 1 0 125900353 147427328 28442 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 35993 28442 104 219 0 35770 0
Current children cumulated CPU time (s) 402.17
Current children cumulated vsize (KiB) 143972

[startup+462.302 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1725936/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=144428 CPUtime=462.15
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 45306 0 0 0 45776 439 0 0 25 0 1 0 125900353 147894272 29320 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 36107 29320 104 219 0 35884 0
Current children cumulated CPU time (s) 462.15
Current children cumulated vsize (KiB) 144428

[startup+522.301 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1725360/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=144888 CPUtime=522.14
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 45885 0 0 0 51730 484 0 0 25 0 1 0 125900353 148365312 29469 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 36222 29469 104 219 0 35999 0
Current children cumulated CPU time (s) 522.14
Current children cumulated vsize (KiB) 144888

[startup+582.302 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1721456/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=145136 CPUtime=582.12
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 47300 0 0 0 57679 533 0 0 25 0 1 0 125900353 148619264 30454 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 36284 30454 104 219 0 36061 0
Current children cumulated CPU time (s) 582.12
Current children cumulated vsize (KiB) 145136

[startup+642.301 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1718640/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=145520 CPUtime=642.11
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 48358 0 0 0 63636 575 0 0 25 0 1 0 125900353 149012480 31125 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 36380 31125 104 219 0 36157 0
Current children cumulated CPU time (s) 642.11
Current children cumulated vsize (KiB) 145520


################
# More data... #
################

[startup+882.301 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1715760/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=146384 CPUtime=882.05
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 50651 0 0 0 87487 718 0 0 25 0 1 0 125900353 149897216 31784 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 36596 31784 104 219 0 36373 0
Current children cumulated CPU time (s) 882.05
Current children cumulated vsize (KiB) 146384

[startup+942.302 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1711024/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=212456 CPUtime=942.04
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 52194 0 0 0 93450 754 0 0 25 0 1 0 125900353 217554944 32940 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53114 32940 104 219 0 52891 0
Current children cumulated CPU time (s) 942.04
Current children cumulated vsize (KiB) 212456

[startup+1002.3 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1710640/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=212592 CPUtime=1002.02
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 52631 0 0 0 99416 786 0 0 25 0 1 0 125900353 217694208 33033 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53148 33033 104 219 0 52925 0
Current children cumulated CPU time (s) 1002.02
Current children cumulated vsize (KiB) 212592

[startup+1062.3 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1710256/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=212592 CPUtime=1062.01
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 53049 0 0 0 105381 820 0 0 25 0 1 0 125900353 217694208 33107 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53148 33107 104 219 0 52925 0
Current children cumulated CPU time (s) 1062.01
Current children cumulated vsize (KiB) 212592

[startup+1122.3 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1707824/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=213024 CPUtime=1122
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 53992 0 0 0 111348 852 0 0 25 0 1 0 125900353 218136576 33706 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53256 33706 104 219 0 53033 0
Current children cumulated CPU time (s) 1122
Current children cumulated vsize (KiB) 213024

[startup+1182.3 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28786
/proc/meminfo: memFree=1707504/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=213024 CPUtime=1181.98
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 54410 0 0 0 117314 884 0 0 25 0 1 0 125900353 218136576 33780 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53256 33780 104 219 0 53033 0
Current children cumulated CPU time (s) 1181.98
Current children cumulated vsize (KiB) 213024

[startup+1242.3 s]
/proc/loadavg: 0.99 0.98 0.99 2/78 28788
/proc/meminfo: memFree=1705328/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=213140 CPUtime=1241.96
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 55225 0 0 0 123284 912 0 0 25 0 1 0 125900353 218255360 34251 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547089 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53285 34251 104 219 0 53062 0
Current children cumulated CPU time (s) 1241.96
Current children cumulated vsize (KiB) 213140

[startup+1302.3 s]
/proc/loadavg: 1.03 1.00 1.00 2/78 28788
/proc/meminfo: memFree=1704880/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=213568 CPUtime=1301.96
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 55659 0 0 0 129250 946 0 0 25 0 1 0 125900353 218693632 34384 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53392 34384 104 219 0 53169 0
Current children cumulated CPU time (s) 1301.96
Current children cumulated vsize (KiB) 213568

[startup+1362.3 s]
/proc/loadavg: 1.01 1.00 1.00 2/78 28788
/proc/meminfo: memFree=1703280/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=213692 CPUtime=1361.94
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 56366 0 0 0 135217 977 0 0 25 0 1 0 125900353 218820608 34747 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53423 34747 104 219 0 53200 0
Current children cumulated CPU time (s) 1361.94
Current children cumulated vsize (KiB) 213692

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28788
/proc/meminfo: memFree=1702896/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=214012 CPUtime=1421.92
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 56786 0 0 0 141189 1003 0 0 25 0 1 0 125900353 219148288 34823 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53503 34823 104 219 0 53280 0
Current children cumulated CPU time (s) 1421.92
Current children cumulated vsize (KiB) 214012

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28788
/proc/meminfo: memFree=1701552/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=214140 CPUtime=1481.91
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 57419 0 0 0 147160 1031 0 0 25 0 1 0 125900353 219279360 35155 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53535 35155 104 219 0 53312 0
Current children cumulated CPU time (s) 1481.91
Current children cumulated vsize (KiB) 214140

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28788
/proc/meminfo: memFree=1697776/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=214272 CPUtime=1541.9
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 58617 0 0 0 153133 1057 0 0 25 0 1 0 125900353 219414528 36095 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53568 36095 104 219 0 53345 0
Current children cumulated CPU time (s) 1541.9
Current children cumulated vsize (KiB) 214272

[startup+1602.3 s]
/proc/loadavg: 1.05 1.01 1.00 2/78 28788
/proc/meminfo: memFree=1697520/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=214272 CPUtime=1601.88
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 58965 0 0 0 159103 1085 0 0 25 0 1 0 125900353 219414528 36142 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53568 36142 104 219 0 53345 0
Current children cumulated CPU time (s) 1601.88
Current children cumulated vsize (KiB) 214272

[startup+1662.3 s]
/proc/loadavg: 1.02 1.01 1.00 2/78 28788
/proc/meminfo: memFree=1697136/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=214732 CPUtime=1661.86
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 59351 0 0 0 165074 1112 0 0 25 0 1 0 125900353 219885568 36227 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134549609 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53683 36227 104 219 0 53460 0
Current children cumulated CPU time (s) 1661.86
Current children cumulated vsize (KiB) 214732

[startup+1722.3 s]
/proc/loadavg: 1.06 1.02 1.00 2/78 28788
/proc/meminfo: memFree=1696752/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=214732 CPUtime=1721.84
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 59716 0 0 0 171049 1135 0 0 25 0 1 0 125900353 219885568 36291 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134552841 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53683 36291 104 219 0 53460 0
Current children cumulated CPU time (s) 1721.84
Current children cumulated vsize (KiB) 214732

[startup+1782.3 s]
/proc/loadavg: 1.07 1.03 1.00 2/78 28788
/proc/meminfo: memFree=1696368/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=214864 CPUtime=1781.83
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 60098 0 0 0 177020 1163 0 0 25 0 1 0 125900353 220020736 36415 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547138 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53716 36415 104 219 0 53493 0
Current children cumulated CPU time (s) 1781.83
Current children cumulated vsize (KiB) 214864



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.5 s]
/proc/loadavg: 1.13 1.04 1.01 2/78 28788
/proc/meminfo: memFree=1694640/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=215008 CPUtime=1800.03
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 60595 0 0 0 178831 1172 0 0 25 0 1 0 125900353 220168192 36826 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53752 36826 104 219 0 53529 0
Current children cumulated CPU time (s) 1800.03
Current children cumulated vsize (KiB) 215008

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1800.5 s]
/proc/loadavg: 1.13 1.04 1.01 2/78 28788
/proc/meminfo: memFree=1694640/2055920 swapFree=4169120/4192956
[pid=28785] ppid=28783 vsize=215008 CPUtime=1800.03
/proc/28785/stat : 28785 (PBS4) R 28783 28785 27538 0 -1 4194304 60595 0 0 0 178831 1172 0 0 25 0 1 0 125900353 220168192 36826 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/28785/statm: 53752 36826 104 219 0 53529 0
Current children cumulated CPU time (s) 1800.03
Current children cumulated vsize (KiB) 215008

Child status: 0
Real time (s): 1800.53
CPU time (s): 1800.07
CPU user time (s): 1788.32
CPU system time (s): 11.7492
CPU usage (%): 99.9743
Max. virtual memory (cumulated for all children) (KiB): 215036

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1788.32
system time used= 11.7492
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 60596
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 8
involuntary context switches= 37260

runsolver used 2.24866 second user time and 4.12137 second system time

The end

Launcher Data (download as text)

Begin job on node15 on Tue Apr 17 03:17:07 UTC 2007

IDJOB= 355188
IDBENCH= 2952
IDSOLVER= 157
FILE ID= node15/355188-1176779827

PBS_JOBID= 4580796

Free space on /tmp= 66438 MiB

SOLVER NAME= PBS4 2007-03-23
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.11.opb
COMMAND LINE= /tmp/evaluation/355188-1176779827/PBS4 /tmp/evaluation/355188-1176779827/instance-355188-1176779827.opb            
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node15/convwatcher-355188-1176779827 -o ROOT/results/node15/conversion-355188-1176779827 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355188-1176779827/instance-355188-1176779827.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node15/watcher-355188-1176779827 -o ROOT/results/node15/solver-355188-1176779827 -C 1800 -W 3600 -M 1800 --output-limit 1,15  /tmp/evaluation/355188-1176779827/PBS4 /tmp/evaluation/355188-1176779827/instance-355188-1176779827.opb            

META MD5SUM SOLVER= b6c24e28fef9e1efa7891be58ea9e46f
MD5SUM BENCH=  5f844d3fbd9d157e56bab6c09ee5f179

RANDOM SEED= 882670118

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node15.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.227
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.227
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1843464 kB
Buffers:          9172 kB
Cached:         129220 kB
SwapCached:       2300 kB
Active:         112652 kB
Inactive:        50296 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1843464 kB
SwapTotal:     4192956 kB
SwapFree:      4169120 kB
Dirty:           44124 kB
Writeback:           0 kB
Mapped:          32056 kB
Slab:            34900 kB
Committed_AS:  6128028 kB
PageTables:       1872 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66438 MiB

End job on node15 on Tue Apr 17 03:47:10 UTC 2007