Trace number 355162

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS4 2007-03-23No Cert. 1800.14 1800.74

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.10.opb
MD5SUMf304ba5324add428c73c7022630c48ee
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark49
Best CPU time to get the best result obtained on this benchmark202.313
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 49
Optimality of the best value was proved YES
Number of variables27027
Total number of constraints1883063
Number of constraints which are clauses1877876
Number of constraints which are cardinality constraints (but not clauses)5187
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint182
Number of terms in the objective function 182
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 182
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 180
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 362
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Quality of the solution as a function of time


Download the above graph as a PDF file / as an EPS file

Solver Data (download as text)

0.00/0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00/0.00	c Solving /tmp/evaluation/355162-1176777509/instance-355162-1176777509.opb ......
24.29/24.39	c done parsing opb.
24.29/24.39	o 182
24.38/24.42	o 181
24.38/24.45	o 180
24.38/24.47	o 179
24.48/24.50	o 178
24.48/24.52	o 177
24.48/24.55	o 176
24.48/24.58	o 175
24.59/24.60	o 174
24.59/24.63	o 173
24.59/24.66	o 172
24.59/24.68	o 171
24.68/24.71	o 170
24.68/24.73	o 169
24.68/24.76	o 168
24.68/24.79	o 167
24.79/24.81	o 166
24.79/24.84	o 165
24.79/24.87	o 164
24.79/24.89	o 163
24.89/24.92	o 162
24.89/24.94	o 161
24.89/24.97	o 160
24.89/25.00	o 159
24.99/25.02	o 158
24.99/25.05	o 157
24.99/25.08	o 156
25.08/25.10	o 155
25.08/25.13	o 154
25.08/25.15	o 153
25.08/25.18	o 152
25.18/25.21	o 151
25.18/25.23	o 150
25.18/25.26	o 149
25.18/25.29	o 148
25.29/25.31	o 147
25.29/25.34	o 146
25.29/25.36	o 145
25.29/25.39	o 144
25.39/25.42	o 143
25.39/25.44	o 142
25.39/25.47	o 141
25.48/25.50	o 140
25.48/25.53	o 139
25.48/25.55	o 138
25.48/25.58	o 137
25.58/25.60	o 136
25.58/25.63	o 135
25.58/25.66	o 134
25.58/25.68	o 133
25.69/25.71	o 132
25.69/25.74	o 131
25.69/25.76	o 130
25.69/25.79	o 129
25.78/25.82	o 128
25.78/25.84	o 127
25.78/25.87	o 126
25.78/25.89	o 125
25.89/25.92	o 124
25.89/25.95	o 123
25.89/25.97	o 122
25.98/26.00	o 121
25.98/26.03	o 120
25.98/26.05	o 119
25.98/26.08	o 118
26.09/26.11	o 117
26.09/26.13	o 116
26.09/26.16	o 115
26.09/26.19	o 114
26.19/26.21	o 113
26.19/26.24	o 112
26.19/26.27	o 111
26.19/26.29	o 110
26.29/26.32	o 109
26.29/26.35	o 108
26.29/26.37	o 107
26.29/26.40	o 106
26.39/26.43	o 105
26.39/26.45	o 104
26.39/26.48	o 103
26.48/26.51	o 102
26.48/26.53	o 101
26.48/26.56	o 100
26.48/26.59	o 99
26.58/26.61	o 98
26.58/26.64	o 97
26.69/26.76	o 96
29.97/30.00	o 95
30.28/30.39	o 94
30.68/30.70	o 93
31.18/31.25	o 92
31.68/31.75	o 91
31.78/31.80	o 90
31.88/31.97	o 89
32.88/32.95	o 88
33.98/34.09	o 87
35.97/36.03	o 86
48.96/49.07	o 85
49.66/49.73	o 84
284.10/284.23	o 83
316.29/316.40	o 82
591.01/591.26	o 81
592.22/592.42	o 80
779.77/780.00	o 79
939.62/939.96	o 78
1098.78/1099.10	o 77
1105.28/1105.66	o 76
1151.37/1151.77	o 75
1800.10/1800.71	s SATISFIABLE

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355162-1176777509/instance-355162-1176777509.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node6/watcher-355162-1176777509 -o ROOT/results/node6/solver-355162-1176777509 -C 1800 -W 3600 -M 1800 --output-limit 1,15 /tmp/evaluation/355162-1176777509/PBS4 /tmp/evaluation/355162-1176777509/instance-355162-1176777509.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.98 1.06 1.08 3/77 17223
/proc/meminfo: memFree=1760304/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=3860 CPUtime=0
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 498 0 0 0 0 0 0 0 18 0 1 0 153788702 3952640 480 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134573157 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 965 493 81 219 0 742 0

[startup+0.092891 s]
/proc/loadavg: 0.98 1.06 1.08 3/77 17223
/proc/meminfo: memFree=1760304/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=7328 CPUtime=0.08
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 1752 0 0 0 8 0 0 0 18 0 1 0 153788702 7503872 1507 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134529780 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 1832 1508 88 219 0 1609 0
Current children cumulated CPU time (s) 0.08
Current children cumulated vsize (KiB) 7328

[startup+0.101891 s]
/proc/loadavg: 0.98 1.06 1.08 3/77 17223
/proc/meminfo: memFree=1760304/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=7328 CPUtime=0.09
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 1762 0 0 0 9 0 0 0 18 0 1 0 153788702 7503872 1517 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134529800 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 1832 1517 88 219 0 1609 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 7328

[startup+0.301915 s]
/proc/loadavg: 0.98 1.06 1.08 3/77 17223
/proc/meminfo: memFree=1760304/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=9008 CPUtime=0.29
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 2180 0 0 0 29 0 0 0 19 0 1 0 153788702 9224192 1779 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135006597 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 2252 1779 89 219 0 2029 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 9008

[startup+0.701962 s]
/proc/loadavg: 0.98 1.06 1.08 3/77 17223
/proc/meminfo: memFree=1760304/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=10932 CPUtime=0.69
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 2864 0 0 0 69 0 0 0 22 0 1 0 153788702 11194368 2270 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135023547 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 2733 2270 89 219 0 2510 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 10932

[startup+1.50106 s]
/proc/loadavg: 0.98 1.06 1.08 2/78 17224
/proc/meminfo: memFree=1749544/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=15572 CPUtime=1.49
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 4371 0 0 0 148 1 0 0 25 0 1 0 153788702 15945728 3392 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134529754 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 3893 3393 89 219 0 3670 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 15572

[startup+3.10124 s]
/proc/loadavg: 0.98 1.06 1.08 2/78 17224
/proc/meminfo: memFree=1743912/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=24060 CPUtime=3.09
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 7191 0 0 0 306 3 0 0 25 0 1 0 153788702 24637440 5443 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135006597 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 6015 5443 89 219 0 5792 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 24060

[startup+6.30162 s]
/proc/loadavg: 1.06 1.07 1.09 2/78 17224
/proc/meminfo: memFree=1727848/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=40976 CPUtime=6.29
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 12760 0 0 0 623 6 0 0 25 0 1 0 153788702 41959424 9475 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 10244 9475 89 219 0 10021 0
Current children cumulated CPU time (s) 6.29
Current children cumulated vsize (KiB) 40976

[startup+12.7014 s]
/proc/loadavg: 1.05 1.07 1.08 2/78 17224
/proc/meminfo: memFree=1696040/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=76916 CPUtime=12.69
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 24466 0 0 0 1256 13 0 0 25 0 1 0 153788702 78761984 18108 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/17223/statm: 19229 18109 89 219 0 19006 0
Current children cumulated CPU time (s) 12.69
Current children cumulated vsize (KiB) 76916

[startup+25.5019 s]
/proc/loadavg: 1.12 1.08 1.09 2/78 17224
/proc/meminfo: memFree=1632168/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=142048 CPUtime=25.48
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 44854 0 0 0 2518 30 0 0 25 0 1 0 153788702 145457152 32298 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 35512 32298 104 219 0 35289 0
Current children cumulated CPU time (s) 25.48
Current children cumulated vsize (KiB) 142048

[startup+51.1019 s]
/proc/loadavg: 1.08 1.08 1.09 2/78 17224
/proc/meminfo: memFree=1628136/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=143940 CPUtime=51.06
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 45906 0 0 0 5045 61 0 0 25 0 1 0 153788702 147394560 33350 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 35985 33350 104 219 0 35762 0
Current children cumulated CPU time (s) 51.06
Current children cumulated vsize (KiB) 143940

[startup+102.306 s]
/proc/loadavg: 1.07 1.08 1.09 2/78 17224
/proc/meminfo: memFree=1620136/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=211108 CPUtime=102.25
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 48205 0 0 0 10114 111 0 0 25 0 1 0 153788702 216174592 35331 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 52777 35331 104 219 0 52554 0
Current children cumulated CPU time (s) 102.25
Current children cumulated vsize (KiB) 211108

[startup+162.302 s]
/proc/loadavg: 1.08 1.08 1.09 2/78 17224
/proc/meminfo: memFree=1615848/2055924 swapFree=4133688/4192956
[pid=17223] ppid=17221 vsize=212484 CPUtime=162.23
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 49957 0 0 0 16054 169 0 0 25 0 1 0 153788702 217583616 36341 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 53121 36341 104 219 0 52898 0
Current children cumulated CPU time (s) 162.23
Current children cumulated vsize (KiB) 212484

[startup+222.302 s]
/proc/loadavg: 1.03 1.06 1.08 2/78 17224
/proc/meminfo: memFree=1612712/2055924 swapFree=4133752/4192956
[pid=17223] ppid=17221 vsize=213608 CPUtime=222.22
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 51300 0 0 0 22001 221 0 0 25 0 1 0 153788702 218734592 37154 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 53402 37154 104 219 0 53179 0
Current children cumulated CPU time (s) 222.22
Current children cumulated vsize (KiB) 213608

[startup+282.302 s]
/proc/loadavg: 1.10 1.08 1.09 2/78 17224
/proc/meminfo: memFree=1610344/2055924 swapFree=4133752/4192956
[pid=17223] ppid=17221 vsize=214648 CPUtime=282.2
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 52428 0 0 0 27951 269 0 0 25 0 1 0 153788702 219799552 37699 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 53662 37699 104 219 0 53439 0
Current children cumulated CPU time (s) 282.2
Current children cumulated vsize (KiB) 214648

[startup+342.302 s]
/proc/loadavg: 1.03 1.06 1.08 2/78 17224
/proc/meminfo: memFree=1605032/2055924 swapFree=4133752/4192956
[pid=17223] ppid=17221 vsize=215052 CPUtime=342.18
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 54312 0 0 0 33905 313 0 0 25 0 1 0 153788702 220213248 39000 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 53763 39000 104 219 0 53540 0
Current children cumulated CPU time (s) 342.18
Current children cumulated vsize (KiB) 215052

[startup+402.302 s]
/proc/loadavg: 1.05 1.06 1.08 2/78 17224
/proc/meminfo: memFree=1602280/2055924 swapFree=4133752/4192956
[pid=17223] ppid=17221 vsize=215508 CPUtime=402.17
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 55486 0 0 0 39863 354 0 0 25 0 1 0 153788702 220680192 39697 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 53877 39697 104 219 0 53654 0
Current children cumulated CPU time (s) 402.17
Current children cumulated vsize (KiB) 215508

[startup+462.301 s]
/proc/loadavg: 1.11 1.08 1.08 2/78 17224
/proc/meminfo: memFree=1598376/2055924 swapFree=4133812/4192956
[pid=17223] ppid=17221 vsize=215864 CPUtime=462.15
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 56904 0 0 0 45820 395 0 0 25 0 1 0 153788702 221044736 40638 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 53966 40638 104 219 0 53743 0
Current children cumulated CPU time (s) 462.15
Current children cumulated vsize (KiB) 215864

[startup+522.301 s]
/proc/loadavg: 1.15 1.09 1.09 2/78 17224
/proc/meminfo: memFree=1597864/2055924 swapFree=4133812/4192956
[pid=17223] ppid=17221 vsize=216128 CPUtime=522.14
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 57496 0 0 0 51783 431 0 0 25 0 1 0 153788702 221315072 40753 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54032 40753 104 219 0 53809 0
Current children cumulated CPU time (s) 522.14
Current children cumulated vsize (KiB) 216128

[startup+582.301 s]
/proc/loadavg: 1.05 1.07 1.08 2/78 17224
/proc/meminfo: memFree=1595304/2055924 swapFree=4133812/4192956
[pid=17223] ppid=17221 vsize=216624 CPUtime=582.12
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 58553 0 0 0 57746 466 0 0 25 0 1 0 153788702 221822976 41386 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54156 41386 104 219 0 53933 0
Current children cumulated CPU time (s) 582.12
Current children cumulated vsize (KiB) 216624

[startup+642.301 s]
/proc/loadavg: 1.09 1.07 1.08 2/78 17224
/proc/meminfo: memFree=1593576/2055924 swapFree=4133872/4192956
[pid=17223] ppid=17221 vsize=216752 CPUtime=642.11
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 59445 0 0 0 63707 504 0 0 25 0 1 0 153788702 221954048 41801 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54188 41801 104 219 0 53965 0
Current children cumulated CPU time (s) 642.11
Current children cumulated vsize (KiB) 216752


################
# More data... #
################

[startup+882.301 s]
/proc/loadavg: 1.11 1.08 1.08 2/78 17224
/proc/meminfo: memFree=1585640/2055924 swapFree=4133936/4192956
[pid=17223] ppid=17221 vsize=217780 CPUtime=882.04
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 63161 0 0 0 87567 637 0 0 25 0 1 0 153788702 223006720 43768 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54445 43768 104 219 0 54222 0
Current children cumulated CPU time (s) 882.04
Current children cumulated vsize (KiB) 217780

[startup+942.301 s]
/proc/loadavg: 1.08 1.08 1.08 2/78 17224
/proc/meminfo: memFree=1580328/2055924 swapFree=4133936/4192956
[pid=17223] ppid=17221 vsize=218036 CPUtime=942.02
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 64868 0 0 0 93537 665 0 0 25 0 1 0 153788702 223268864 45104 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134552841 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54509 45104 104 219 0 54286 0
Current children cumulated CPU time (s) 942.02
Current children cumulated vsize (KiB) 218036

[startup+1002.3 s]
/proc/loadavg: 1.07 1.07 1.08 2/78 17224
/proc/meminfo: memFree=1575848/2055924 swapFree=4134000/4192956
[pid=17223] ppid=17221 vsize=218168 CPUtime=1002.01
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 66328 0 0 0 99505 696 0 0 25 0 1 0 153788702 223404032 46140 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54542 46140 104 219 0 54319 0
Current children cumulated CPU time (s) 1002.01
Current children cumulated vsize (KiB) 218168

[startup+1062.3 s]
/proc/loadavg: 1.06 1.07 1.08 2/78 17224
/proc/meminfo: memFree=1575464/2055924 swapFree=4134000/4192956
[pid=17223] ppid=17221 vsize=218292 CPUtime=1061.99
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 66715 0 0 0 105474 725 0 0 25 0 1 0 153788702 223531008 46209 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54573 46209 104 219 0 54350 0
Current children cumulated CPU time (s) 1061.99
Current children cumulated vsize (KiB) 218292

[startup+1122.3 s]
/proc/loadavg: 1.02 1.06 1.07 2/78 17224
/proc/meminfo: memFree=1575016/2055924 swapFree=4134056/4192956
[pid=17223] ppid=17221 vsize=218696 CPUtime=1121.98
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 67311 0 0 0 111451 747 0 0 25 0 1 0 153788702 223944704 46328 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54674 46328 104 219 0 54451 0
Current children cumulated CPU time (s) 1121.98
Current children cumulated vsize (KiB) 218696

[startup+1182.3 s]
/proc/loadavg: 1.15 1.09 1.08 2/78 17224
/proc/meminfo: memFree=1574696/2055924 swapFree=4134056/4192956
[pid=17223] ppid=17221 vsize=218828 CPUtime=1181.96
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 67742 0 0 0 117425 771 0 0 25 0 1 0 153788702 224079872 46388 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54707 46388 104 219 0 54484 0
Current children cumulated CPU time (s) 1181.96
Current children cumulated vsize (KiB) 218828

[startup+1242.3 s]
/proc/loadavg: 1.13 1.09 1.08 2/78 17224
/proc/meminfo: memFree=1574248/2055924 swapFree=4134120/4192956
[pid=17223] ppid=17221 vsize=219128 CPUtime=1241.94
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 68275 0 0 0 123400 794 0 0 25 0 1 0 153788702 224387072 46497 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54782 46497 104 219 0 54559 0
Current children cumulated CPU time (s) 1241.94
Current children cumulated vsize (KiB) 219128

[startup+1302.3 s]
/proc/loadavg: 1.11 1.09 1.08 2/78 17224
/proc/meminfo: memFree=1573928/2055924 swapFree=4134120/4192956
[pid=17223] ppid=17221 vsize=219260 CPUtime=1301.93
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 68708 0 0 0 129376 817 0 0 25 0 1 0 153788702 224522240 46559 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54815 46559 104 219 0 54592 0
Current children cumulated CPU time (s) 1301.93
Current children cumulated vsize (KiB) 219260

[startup+1362.3 s]
/proc/loadavg: 1.15 1.10 1.09 2/84 17298
/proc/meminfo: memFree=1571960/2055924 swapFree=4134120/4192956
[pid=17223] ppid=17221 vsize=219396 CPUtime=1361.87
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 69210 0 0 0 135345 842 0 0 25 0 1 0 153788702 224661504 46690 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54849 46690 104 219 0 54626 0
Current children cumulated CPU time (s) 1361.87
Current children cumulated vsize (KiB) 219396

[startup+1422.31 s]
/proc/loadavg: 1.16 1.11 1.09 2/78 17422
/proc/meminfo: memFree=1569696/2055924 swapFree=4134176/4192956
[pid=17223] ppid=17221 vsize=219528 CPUtime=1421.79
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 70347 0 0 0 141309 870 0 0 25 0 1 0 153788702 224796672 47562 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134549337 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54882 47562 104 219 0 54659 0
Current children cumulated CPU time (s) 1421.79
Current children cumulated vsize (KiB) 219528

[startup+1482.3 s]
/proc/loadavg: 1.11 1.10 1.09 2/78 17422
/proc/meminfo: memFree=1566176/2055924 swapFree=4134176/4192956
[pid=17223] ppid=17221 vsize=219980 CPUtime=1481.77
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 71516 0 0 0 147283 894 0 0 25 0 1 0 153788702 225259520 48413 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54995 48413 104 219 0 54772 0
Current children cumulated CPU time (s) 1481.77
Current children cumulated vsize (KiB) 219980

[startup+1542.3 s]
/proc/loadavg: 1.14 1.11 1.09 2/78 17422
/proc/meminfo: memFree=1565984/2055924 swapFree=4134176/4192956
[pid=17223] ppid=17221 vsize=219980 CPUtime=1541.76
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 71883 0 0 0 153256 920 0 0 25 0 1 0 153788702 225259520 48462 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547308 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 54995 48462 104 219 0 54772 0
Current children cumulated CPU time (s) 1541.76
Current children cumulated vsize (KiB) 219980

[startup+1602.3 s]
/proc/loadavg: 1.09 1.10 1.09 2/78 17422
/proc/meminfo: memFree=1565600/2055924 swapFree=4134228/4192956
[pid=17223] ppid=17221 vsize=220452 CPUtime=1601.74
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 72346 0 0 0 159232 942 0 0 25 0 1 0 153788702 225742848 48554 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 55113 48554 104 219 0 54890 0
Current children cumulated CPU time (s) 1601.74
Current children cumulated vsize (KiB) 220452

[startup+1662.3 s]
/proc/loadavg: 1.07 1.10 1.09 2/78 17422
/proc/meminfo: memFree=1565216/2055924 swapFree=4134228/4192956
[pid=17223] ppid=17221 vsize=220584 CPUtime=1661.72
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 72797 0 0 0 165208 964 0 0 25 0 1 0 153788702 225878016 48634 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 55146 48634 104 219 0 54923 0
Current children cumulated CPU time (s) 1661.72
Current children cumulated vsize (KiB) 220584

[startup+1722.3 s]
/proc/loadavg: 1.14 1.11 1.09 2/78 17422
/proc/meminfo: memFree=1564968/2055924 swapFree=4134228/4192956
[pid=17223] ppid=17221 vsize=220584 CPUtime=1721.71
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 73167 0 0 0 171181 990 0 0 25 0 1 0 153788702 225878016 48686 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 55146 48686 104 219 0 54923 0
Current children cumulated CPU time (s) 1721.71
Current children cumulated vsize (KiB) 220584

[startup+1782.3 s]
/proc/loadavg: 1.16 1.12 1.09 2/78 17422
/proc/meminfo: memFree=1562600/2055924 swapFree=4134228/4192956
[pid=17223] ppid=17221 vsize=220716 CPUtime=1781.69
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 74088 0 0 0 177157 1012 0 0 25 0 1 0 153788702 226013184 49289 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 55179 49289 104 219 0 54956 0
Current children cumulated CPU time (s) 1781.69
Current children cumulated vsize (KiB) 220716



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.71 s]
/proc/loadavg: 1.18 1.12 1.10 2/78 17422
/proc/meminfo: memFree=1561576/2055924 swapFree=4134228/4192956
[pid=17223] ppid=17221 vsize=221216 CPUtime=1800.1
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 74432 0 0 0 178992 1018 0 0 25 0 1 0 153788702 226525184 49527 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 55304 49527 104 219 0 55081 0
Current children cumulated CPU time (s) 1800.1
Current children cumulated vsize (KiB) 221216

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1800.71 s]
/proc/loadavg: 1.18 1.12 1.10 2/78 17422
/proc/meminfo: memFree=1561576/2055924 swapFree=4134228/4192956
[pid=17223] ppid=17221 vsize=221216 CPUtime=1800.1
/proc/17223/stat : 17223 (PBS4) R 17221 17223 16024 0 -1 4194304 74432 0 0 0 178992 1018 0 0 25 0 1 0 153788702 226525184 49527 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/17223/statm: 55304 49527 104 219 0 55081 0
Current children cumulated CPU time (s) 1800.1
Current children cumulated vsize (KiB) 221216

Child status: 0
Real time (s): 1800.74
CPU time (s): 1800.14
CPU user time (s): 1789.92
CPU system time (s): 10.2164
CPU usage (%): 99.9665
Max. virtual memory (cumulated for all children) (KiB): 221216

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1789.92
system time used= 10.2164
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 74433
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 8
involuntary context switches= 3402

runsolver used 2.07468 second user time and 4.45132 second system time

The end

Launcher Data (download as text)

Begin job on node6 on Tue Apr 17 02:38:30 UTC 2007

IDJOB= 355162
IDBENCH= 2950
IDSOLVER= 157
FILE ID= node6/355162-1176777509

PBS_JOBID= 4580786

Free space on /tmp= 66426 MiB

SOLVER NAME= PBS4 2007-03-23
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.10.opb
COMMAND LINE= /tmp/evaluation/355162-1176777509/PBS4 /tmp/evaluation/355162-1176777509/instance-355162-1176777509.opb            
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node6/convwatcher-355162-1176777509 -o ROOT/results/node6/conversion-355162-1176777509 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355162-1176777509/instance-355162-1176777509.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node6/watcher-355162-1176777509 -o ROOT/results/node6/solver-355162-1176777509 -C 1800 -W 3600 -M 1800 --output-limit 1,15  /tmp/evaluation/355162-1176777509/PBS4 /tmp/evaluation/355162-1176777509/instance-355162-1176777509.opb            

META MD5SUM SOLVER= b6c24e28fef9e1efa7891be58ea9e46f
MD5SUM BENCH=  f304ba5324add428c73c7022630c48ee

RANDOM SEED= 72541817

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node6.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.232
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.232
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055924 kB
MemFree:       1760712 kB
Buffers:         15772 kB
Cached:         204392 kB
SwapCached:      22052 kB
Active:         121432 kB
Inactive:       130348 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055924 kB
LowFree:       1760712 kB
SwapTotal:     4192956 kB
SwapFree:      4133688 kB
Dirty:           68060 kB
Writeback:           0 kB
Mapped:          29800 kB
Slab:            28964 kB
Committed_AS:  6829640 kB
PageTables:       1784 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66426 MiB

End job on node6 on Tue Apr 17 03:08:33 UTC 2007