Trace number 85872

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
glpPB 0.2? (TO) 1800.61 1801.39

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.14.opb
MD5SUMe81449c340a6e16e28a331cb4252cc2b
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark42
Best CPU time to get the best result obtained on this benchmark128.584
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 42
Optimality of the best value was proved YES
Number of variables23848
Total number of constraints1451912
Number of constraints which are clauses1447776
Number of constraints which are cardinality constraints (but not clauses)4136
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint176
Number of terms in the objective function 176
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 176
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 174
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 350
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00	c glpPB 0.2 (July 2006)
0.00	c An Application of GLPK 4.10 for PB Constraints
0.00	c Done @ University of Michigan, Ann Arbor, MI
0.00	c  by Hossein Sheini

Verifier Data (download as text)

ERROR: no interpretation found !

Watcher Data (download as text)

Enforcing CPU limit (will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime (will send SIGXCPU) limit: 1830 seconds
Enforcing Stack size limit: 67108864 bytes

runsolver version 3.0.3 (c) roussel@cril.univ-artois.fr

Enforcing memory limit (will send SIGKILL): 1843200 Kb
Enforcing VSIZE limit: 1887436800 bytes
command line: runsolver --timestamp -w ROOT/results/node54/watcher-85872-1154176770 -o ROOT/results/node54/solver-85872-1154176770 -C 1800 -M 1800 -S 64 ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node54/85872-1154176770/instance-85872-1154176770.opb 

Current StackSize limit: 67108864 bytes

/proc/loadavg: 0.91 0.97 0.91 2/64 11747
/proc/meminfo: memFree=1565240/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=2664 CPUtime=0
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 259 0 0 0 0 0 0 0 18 0 1 0 164547361 2727936 229 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134530891 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 666 229 192 40 0 83 0

[startup+10.0025 s]
/proc/loadavg: 0.93 0.97 0.91 2/64 11747
/proc/meminfo: memFree=1462072/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=105776 CPUtime=9.99
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 26057 0 0 0 987 12 0 0 25 0 1 0 164547361 108314624 26027 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10591959 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 26444 26027 199 40 0 25861 0
Current children cumulated CPU time (s) 9.99
Current children cumulated vsize (Kb) 105776

[startup+20.0096 s]
/proc/loadavg: 0.94 0.97 0.91 2/64 11747
/proc/meminfo: memFree=1360128/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=208252 CPUtime=19.99
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 52420 0 0 0 1975 24 0 0 25 0 1 0 164547361 213250048 51654 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 10591959 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 52063 51654 201 40 0 51480 0
Current children cumulated CPU time (s) 19.99
Current children cumulated vsize (Kb) 208252

[startup+30.0166 s]
/proc/loadavg: 0.95 0.97 0.91 2/64 11747
/proc/meminfo: memFree=603328/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=962988 CPUtime=29.99
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 279145 0 0 0 2877 122 0 0 25 0 1 0 164547361 986099712 240356 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 240747 240356 221 40 0 240164 0
Current children cumulated CPU time (s) 29.99
Current children cumulated vsize (Kb) 962988

[startup+40.0227 s]
/proc/loadavg: 0.95 0.97 0.91 2/64 11747
/proc/meminfo: memFree=603328/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=962988 CPUtime=40
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 279145 0 0 0 3877 123 0 0 25 0 1 0 164547361 986099712 240356 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643291 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 240747 240356 221 40 0 240164 0
Current children cumulated CPU time (s) 40
Current children cumulated vsize (Kb) 962988

[startup+50.0288 s]
/proc/loadavg: 0.96 0.97 0.91 2/64 11747
/proc/meminfo: memFree=517760/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=50
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 333029 0 0 0 4852 148 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581956 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 50
Current children cumulated vsize (Kb) 1048068

[startup+60.0349 s]
/proc/loadavg: 0.97 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517760/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=60
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 333029 0 0 0 5852 148 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643256 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 60
Current children cumulated vsize (Kb) 1048068

[startup+70.041 s]
/proc/loadavg: 0.97 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517760/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=70
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 344373 0 0 0 6846 154 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582325 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 70
Current children cumulated vsize (Kb) 1048068

[startup+80.0471 s]
/proc/loadavg: 0.98 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517760/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=80
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 355717 0 0 0 7840 160 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582342 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 80
Current children cumulated vsize (Kb) 1048068

[startup+90.0532 s]
/proc/loadavg: 0.98 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517760/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=90
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 355717 0 0 0 8840 160 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643168 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 90
Current children cumulated vsize (Kb) 1048068

[startup+100.059 s]
/proc/loadavg: 0.98 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=100.01
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 367061 0 0 0 9835 166 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581971 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 100.01
Current children cumulated vsize (Kb) 1048068

[startup+110.065 s]
/proc/loadavg: 0.98 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=110.01
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 378405 0 0 0 10829 172 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 110.01
Current children cumulated vsize (Kb) 1048068

[startup+120.071 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=120.02
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 378405 0 0 0 11830 172 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643168 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 120.02
Current children cumulated vsize (Kb) 1048068

[startup+130.078 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=130.01
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 389749 0 0 0 12824 177 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589605 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 130.01
Current children cumulated vsize (Kb) 1048068

[startup+140.084 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=140.02
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 401093 0 0 0 13819 183 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587691 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 140.02
Current children cumulated vsize (Kb) 1048068

[startup+150.09 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=150.02
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 401093 0 0 0 14819 183 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587138 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 150.02
Current children cumulated vsize (Kb) 1048068

[startup+160.096 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=160.02
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 412437 0 0 0 15813 189 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582412 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 160.02
Current children cumulated vsize (Kb) 1048068

[startup+170.103 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=170.03
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 423781 0 0 0 16808 195 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643691 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 170.03
Current children cumulated vsize (Kb) 1048068

[startup+180.11 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517760/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=180.03
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 423781 0 0 0 17808 195 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643550 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 180.03
Current children cumulated vsize (Kb) 1048068

[startup+190.117 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=190.04
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 435125 0 0 0 18803 201 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587684 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 190.04
Current children cumulated vsize (Kb) 1048068

[startup+200.124 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749
/proc/meminfo: memFree=517696/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=200.03
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 446469 0 0 0 19797 206 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587141 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 200.03
Current children cumulated vsize (Kb) 1048068

[startup+210.13 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11749

################
# More data... #
################

/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1558181 0 0 0 177364 770 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583695 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1781.34
Current children cumulated vsize (Kb) 1048068

[startup+1783.13 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517312/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1782.35
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1558181 0 0 0 177465 770 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589593 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1782.35
Current children cumulated vsize (Kb) 1048068

[startup+1784.14 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517312/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1783.35
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1558181 0 0 0 177565 770 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581732 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1783.35
Current children cumulated vsize (Kb) 1048068

[startup+1785.14 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517312/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1784.36
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1558181 0 0 0 177666 770 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583855 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1784.36
Current children cumulated vsize (Kb) 1048068

[startup+1786.15 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517312/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1785.36
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1558181 0 0 0 177766 770 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643678 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1785.36
Current children cumulated vsize (Kb) 1048068

[startup+1787.15 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=472128/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1093444 CPUtime=1786.36
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 177861 775 0 0 25 0 1 0 164547361 1119686656 272970 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639273 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 273361 272970 221 40 0 272778 0
Current children cumulated CPU time (s) 1786.36
Current children cumulated vsize (Kb) 1093444

[startup+1788.16 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517312/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1787.37
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 177961 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581237 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1787.37
Current children cumulated vsize (Kb) 1048068

[startup+1789.16 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517312/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1788.38
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178062 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643159 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1788.38
Current children cumulated vsize (Kb) 1048068

[startup+1790.17 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517312/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1789.38
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178162 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643767 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1789.38
Current children cumulated vsize (Kb) 1048068

[startup+1791.17 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1790.38
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178262 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581732 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1790.38
Current children cumulated vsize (Kb) 1048068

[startup+1792.18 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1791.39
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178363 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1791.39
Current children cumulated vsize (Kb) 1048068

[startup+1793.18 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1792.39
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178463 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643256 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1792.39
Current children cumulated vsize (Kb) 1048068

[startup+1794.19 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1793.4
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178564 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643780 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1793.4
Current children cumulated vsize (Kb) 1048068

[startup+1795.19 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1794.4
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178664 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1794.4
Current children cumulated vsize (Kb) 1048068

[startup+1796.2 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1795.41
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178765 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643272 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1795.41
Current children cumulated vsize (Kb) 1048068

[startup+1797.2 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1796.41
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178865 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643635 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1796.41
Current children cumulated vsize (Kb) 1048068

[startup+1798.21 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1797.42
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 178966 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134590188 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1797.42
Current children cumulated vsize (Kb) 1048068

[startup+1799.21 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1798.42
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 179066 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643566 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1798.42
Current children cumulated vsize (Kb) 1048068

[startup+1800.22 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1799.43
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 179167 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643498 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1799.43
Current children cumulated vsize (Kb) 1048068

[startup+1801.22 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1800.43
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 179267 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1800.43
Current children cumulated vsize (Kb) 1048068



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.23 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 11947
/proc/meminfo: memFree=517376/2055920 swapFree=4174612/4192956
[pid=11747] ppid=11745 vsize=1048068 CPUtime=1800.44
/proc/11747/stat : 11747 (glpPBv3) R 11745 11747 11698 0 -1 0 1569525 0 0 0 179268 776 0 0 25 0 1 0 164547361 1073221632 261626 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643580 0 0 4096 0 0 0 0 17 1 0 0
/proc/11747/statm: 262017 261626 221 40 0 261434 0
Current children cumulated CPU time (s) 1800.44
Current children cumulated vsize (Kb) 1048068

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.39
CPU time (s): 1800.61
CPU user time (s): 1792.68
CPU system time (s): 7.92679
CPU usage (%): 99.9564
Max. virtual memory (cumulated for all children) (Kb): 1093444
The end

Launcher Data (download as text)

Begin job on node54 on Sat Jul 29 12:39:32 UTC 2006


FILE ID= 85872-1154176770

PBS_JOBID= 893649

BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.14.opb
COMMAND LINE= ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node54/85872-1154176770/instance-85872-1154176770.opb
RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node54/watcher-85872-1154176770 -o ROOT/results/node54/solver-85872-1154176770 -C 1800 -M 1800 -S 64  ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node54/85872-1154176770/instance-85872-1154176770.opb

MD5SUM SOLVER= 29ce95346658d7502ba983059bfb8cff
MD5SUM BENCH=  e81449c340a6e16e28a331cb4252cc2b

RANDOM SEED= 471766891

TIMEOUT= 1800 seconds


/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.256
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.256
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1565448 kB
Buffers:         30188 kB
Cached:         374108 kB
SwapCached:      12000 kB
Active:         123648 kB
Inactive:       297660 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1565448 kB
SwapTotal:     4192956 kB
SwapFree:      4174612 kB
Dirty:             180 kB
Writeback:           0 kB
Mapped:          14468 kB
Slab:            55192 kB
Committed_AS:   685484 kB
PageTables:       1428 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB


End job on node54 on Sat Jul 29 13:09:34 UTC 2006