Trace number 50583

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS 4.1L? (TO) 1800.55 1801.26

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.02.opb
MD5SUM88c0da0b31a99941a4f2c09165ead688
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark44
Best CPU time to get the best result obtained on this benchmark107.139
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 44
Optimality of the best value was proved YES
Number of variables21566
Total number of constraints1314050
Number of constraints which are clauses1310032
Number of constraints which are cardinality constraints (but not clauses)4018
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint164
Number of terms in the objective function 164
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 164
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 162
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 326
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00	c Solving ROOT/tmp/node54/50583-1154116862/instance-50583-1154116862.opb ......
14.62	c done parsing opb.
14.62	o 164
14.64	o 163
14.66	o 162
14.68	o 161
14.70	o 160
14.72	o 159
14.73	o 158
14.75	o 157
14.77	o 156
14.79	o 155
14.81	o 154
14.83	o 153
14.84	o 152
14.86	o 151
14.88	o 150
14.90	o 149
14.92	o 148
14.94	o 147
14.96	o 146
14.97	o 145
14.99	o 144
15.01	o 143
15.03	o 142
15.05	o 141
15.07	o 140
15.09	o 139
15.11	o 138
15.12	o 137
15.14	o 136
15.16	o 135
15.18	o 134
15.20	o 133
15.22	o 132
15.24	o 131
15.26	o 130
15.27	o 129
15.29	o 128
15.31	o 127
15.33	o 126
15.35	o 125
15.37	o 124
15.39	o 123
15.41	o 122
15.43	o 121
15.44	o 120
15.46	o 119
15.48	o 118
15.50	o 117
15.52	o 116
15.54	o 115
15.56	o 114
15.57	o 113
15.59	o 112
15.61	o 111
15.63	o 110
15.65	o 109
15.67	o 108
15.69	o 107
15.71	o 106
15.72	o 105
15.74	o 104
15.76	o 103
15.78	o 102
15.80	o 101
15.82	o 100
15.84	o 99
15.86	o 98
15.87	o 97
15.89	o 96
15.91	o 95
15.93	o 94
15.95	o 93
15.97	o 92
15.99	o 91
16.01	o 90
16.03	o 89
16.04	o 88
17.20	o 87
17.53	o 86
17.61	o 85
18.25	o 84
18.62	o 83
18.65	o 82
18.68	o 81
18.87	o 80
28.24	o 79
94.81	o 78
129.43	o 77
239.12	o 76
284.01	o 75
350.04	o 74
366.92	o 73
453.91	o 72
511.38	o 71
589.53	o 70
720.26	o 69
720.81	o 68
1030.93	o 67

Verifier Data (download as text)

ERROR: no interpretation found !

Watcher Data (download as text)

Enforcing CPU limit (will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime (will send SIGXCPU) limit: 1830 seconds
Enforcing Stack size limit: 67108864 bytes

runsolver version 3.0.3 (c) roussel@cril.univ-artois.fr

Enforcing memory limit (will send SIGKILL): 1843200 Kb
Enforcing VSIZE limit: 1887436800 bytes
command line: runsolver --timestamp -w ROOT/results/node54/watcher-50583-1154116862 -o ROOT/results/node54/solver-50583-1154116862 -C 1800 -M 1800 -S 64 ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node54/50583-1154116862/instance-50583-1154116862.opb 186069432 

Current StackSize limit: 67108864 bytes

/proc/loadavg: 0.93 0.97 0.97 3/70 2617
/proc/meminfo: memFree=1391424/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=3424 CPUtime=0
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 161 0 0 0 0 0 0 0 19 0 1 0 158556414 3506176 144 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134598843 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 856 146 90 232 0 621 0

[startup+10.0033 s]
/proc/loadavg: 0.94 0.97 0.97 2/70 2699
/proc/meminfo: memFree=1325864/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=74912 CPUtime=9.96
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 22747 0 0 0 983 13 0 0 25 0 1 0 158556414 76709888 16529 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134617036 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 18728 16529 100 232 0 18493 0
Current children cumulated CPU time (s) 9.96
Current children cumulated vsize (Kb) 74912

[startup+20.0104 s]
/proc/loadavg: 0.95 0.97 0.97 2/70 2749
/proc/meminfo: memFree=1297704/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=137448 CPUtime=19.97
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 36007 0 0 0 1961 36 0 0 25 0 1 0 158556414 140746752 23593 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 34362 23593 108 232 0 34127 0
Current children cumulated CPU time (s) 19.97
Current children cumulated vsize (Kb) 137448

[startup+30.0174 s]
/proc/loadavg: 0.95 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1296544/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=138108 CPUtime=29.95
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 36614 0 0 0 2950 45 0 0 25 0 1 0 158556414 141422592 24157 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 34527 24157 108 232 0 34292 0
Current children cumulated CPU time (s) 29.95
Current children cumulated vsize (Kb) 138108

[startup+40.0245 s]
/proc/loadavg: 0.96 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1292144/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=139120 CPUtime=39.95
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 37849 0 0 0 3939 56 0 0 25 0 1 0 158556414 142458880 25263 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 34780 25263 108 232 0 34545 0
Current children cumulated CPU time (s) 39.95
Current children cumulated vsize (Kb) 139120

[startup+50.0316 s]
/proc/loadavg: 0.97 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1290936/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=139576 CPUtime=49.95
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 38285 0 0 0 4928 67 0 0 25 0 1 0 158556414 142925824 25570 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 34894 25570 108 232 0 34659 0
Current children cumulated CPU time (s) 49.95
Current children cumulated vsize (Kb) 139576

[startup+60.0377 s]
/proc/loadavg: 0.97 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1290168/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=139708 CPUtime=59.96
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 38598 0 0 0 5918 78 0 0 25 0 1 0 158556414 143060992 25797 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134546505 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 34927 25797 108 232 0 34692 0
Current children cumulated CPU time (s) 59.96
Current children cumulated vsize (Kb) 139708

[startup+70.0448 s]
/proc/loadavg: 0.97 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1289336/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=140112 CPUtime=69.96
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 38930 0 0 0 6906 90 0 0 25 0 1 0 158556414 143474688 25957 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35028 25957 108 232 0 34793 0
Current children cumulated CPU time (s) 69.96
Current children cumulated vsize (Kb) 140112

[startup+80.0519 s]
/proc/loadavg: 0.98 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1289080/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=140364 CPUtime=79.97
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 39142 0 0 0 7898 99 0 0 25 0 1 0 158556414 143732736 26040 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35091 26040 108 232 0 34856 0
Current children cumulated CPU time (s) 79.97
Current children cumulated vsize (Kb) 140364

[startup+90.058 s]
/proc/loadavg: 0.98 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1286264/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=140496 CPUtime=89.96
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 39962 0 0 0 8892 104 0 0 25 0 1 0 158556414 143867904 26774 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35124 26774 108 232 0 34889 0
Current children cumulated CPU time (s) 89.96
Current children cumulated vsize (Kb) 140496

[startup+100.064 s]
/proc/loadavg: 0.98 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1284280/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=140740 CPUtime=99.97
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 40579 0 0 0 9884 113 0 0 25 0 1 0 158556414 144117760 27219 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35185 27219 108 232 0 34950 0
Current children cumulated CPU time (s) 99.97
Current children cumulated vsize (Kb) 140740

[startup+110.07 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1282616/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=141012 CPUtime=109.97
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 41132 0 0 0 10877 120 0 0 25 0 1 0 158556414 144396288 27643 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35253 27643 108 232 0 35018 0
Current children cumulated CPU time (s) 109.97
Current children cumulated vsize (Kb) 141012

[startup+120.076 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1281080/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=141136 CPUtime=119.98
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 41643 0 0 0 11870 128 0 0 25 0 1 0 158556414 144523264 28068 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134617144 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35284 28068 108 232 0 35049 0
Current children cumulated CPU time (s) 119.98
Current children cumulated vsize (Kb) 141136

[startup+130.082 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1279736/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=141260 CPUtime=129.98
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 42066 0 0 0 12862 136 0 0 25 0 1 0 158556414 144650240 28362 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35315 28362 108 232 0 35080 0
Current children cumulated CPU time (s) 129.98
Current children cumulated vsize (Kb) 141260

[startup+140.088 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1278648/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=141388 CPUtime=139.98
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 42467 0 0 0 13853 145 0 0 25 0 1 0 158556414 144781312 28634 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134546505 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35347 28634 108 232 0 35112 0
Current children cumulated CPU time (s) 139.98
Current children cumulated vsize (Kb) 141388

[startup+150.095 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1278456/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=141520 CPUtime=149.98
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 42634 0 0 0 14844 154 0 0 25 0 1 0 158556414 144916480 28715 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35380 28715 108 232 0 35145 0
Current children cumulated CPU time (s) 149.98
Current children cumulated vsize (Kb) 141520

[startup+160.101 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1276024/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=141520 CPUtime=159.98
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 43327 0 0 0 15838 160 0 0 25 0 1 0 158556414 144916480 29279 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134611556 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35380 29279 108 232 0 35145 0
Current children cumulated CPU time (s) 159.98
Current children cumulated vsize (Kb) 141520

[startup+170.107 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1275896/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=141804 CPUtime=169.98
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 43447 0 0 0 16829 169 0 0 25 0 1 0 158556414 145207296 29313 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35451 29313 108 232 0 35216 0
Current children cumulated CPU time (s) 169.98
Current children cumulated vsize (Kb) 141804

[startup+180.113 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1274936/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=141936 CPUtime=179.99
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 43815 0 0 0 17821 178 0 0 25 0 1 0 158556414 145342464 29595 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35484 29595 108 232 0 35249 0
Current children cumulated CPU time (s) 179.99
Current children cumulated vsize (Kb) 141936

[startup+190.119 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1274168/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=142096 CPUtime=190
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 44101 0 0 0 18813 187 0 0 25 0 1 0 158556414 145506304 29752 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35524 29752 108 232 0 35289 0
Current children cumulated CPU time (s) 190
Current children cumulated vsize (Kb) 142096

[startup+200.125 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1274040/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=142096 CPUtime=199.99
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 44216 0 0 0 19801 198 0 0 25 0 1 0 158556414 145506304 29781 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 35524 29781 108 232 0 35289 0
Current children cumulated CPU time (s) 199.99
Current children cumulated vsize (Kb) 142096

[startup+210.131 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789

################
# More data... #
################

/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62922 0 0 0 177212 930 0 0 25 0 1 0 158556414 220041216 38253 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38253 108 232 0 53486 0
Current children cumulated CPU time (s) 1781.42
Current children cumulated vsize (Kb) 214884

[startup+1783.13 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1782.43
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62923 0 0 0 177312 931 0 0 25 0 1 0 158556414 220041216 38254 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38254 108 232 0 53486 0
Current children cumulated CPU time (s) 1782.43
Current children cumulated vsize (Kb) 214884

[startup+1784.13 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1783.43
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62923 0 0 0 177412 931 0 0 25 0 1 0 158556414 220041216 38254 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38254 108 232 0 53486 0
Current children cumulated CPU time (s) 1783.43
Current children cumulated vsize (Kb) 214884

[startup+1785.14 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1784.43
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62924 0 0 0 177512 931 0 0 25 0 1 0 158556414 220041216 38255 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552414 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38255 108 232 0 53486 0
Current children cumulated CPU time (s) 1784.43
Current children cumulated vsize (Kb) 214884

[startup+1786.14 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1785.44
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62924 0 0 0 177612 932 0 0 25 0 1 0 158556414 220041216 38255 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38255 108 232 0 53486 0
Current children cumulated CPU time (s) 1785.44
Current children cumulated vsize (Kb) 214884

[startup+1787.15 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1786.45
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62968 0 0 0 177712 933 0 0 25 0 1 0 158556414 220041216 38256 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134559006 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38256 108 232 0 53486 0
Current children cumulated CPU time (s) 1786.45
Current children cumulated vsize (Kb) 214884

[startup+1788.15 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1787.45
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62968 0 0 0 177812 933 0 0 25 0 1 0 158556414 220041216 38256 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38256 108 232 0 53486 0
Current children cumulated CPU time (s) 1787.45
Current children cumulated vsize (Kb) 214884

[startup+1789.16 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1788.46
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62969 0 0 0 177912 934 0 0 25 0 1 0 158556414 220041216 38257 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38257 108 232 0 53486 0
Current children cumulated CPU time (s) 1788.46
Current children cumulated vsize (Kb) 214884

[startup+1790.16 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1789.46
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62969 0 0 0 178012 934 0 0 25 0 1 0 158556414 220041216 38257 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38257 108 232 0 53486 0
Current children cumulated CPU time (s) 1789.46
Current children cumulated vsize (Kb) 214884

[startup+1791.17 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1790.47
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62970 0 0 0 178112 935 0 0 25 0 1 0 158556414 220041216 38258 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134549087 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38258 108 232 0 53486 0
Current children cumulated CPU time (s) 1790.47
Current children cumulated vsize (Kb) 214884

[startup+1792.17 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1791.47
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62970 0 0 0 178212 935 0 0 25 0 1 0 158556414 220041216 38258 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38258 108 232 0 53486 0
Current children cumulated CPU time (s) 1791.47
Current children cumulated vsize (Kb) 214884

[startup+1793.18 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1792.47
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62971 0 0 0 178312 935 0 0 25 0 1 0 158556414 220041216 38259 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38259 108 232 0 53486 0
Current children cumulated CPU time (s) 1792.47
Current children cumulated vsize (Kb) 214884

[startup+1794.18 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1793.48
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62974 0 0 0 178412 936 0 0 25 0 1 0 158556414 220041216 38262 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38262 108 232 0 53486 0
Current children cumulated CPU time (s) 1793.48
Current children cumulated vsize (Kb) 214884

[startup+1795.19 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1794.48
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 62975 0 0 0 178512 936 0 0 25 0 1 0 158556414 220041216 38263 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134550377 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38263 108 232 0 53486 0
Current children cumulated CPU time (s) 1794.48
Current children cumulated vsize (Kb) 214884

[startup+1796.19 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1795.48
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 63018 0 0 0 178612 936 0 0 25 0 1 0 158556414 220041216 38263 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38263 108 232 0 53486 0
Current children cumulated CPU time (s) 1795.48
Current children cumulated vsize (Kb) 214884

[startup+1797.2 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1796.49
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 63018 0 0 0 178712 937 0 0 25 0 1 0 158556414 220041216 38263 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38263 108 232 0 53486 0
Current children cumulated CPU time (s) 1796.49
Current children cumulated vsize (Kb) 214884

[startup+1798.2 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1797.49
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 63019 0 0 0 178812 937 0 0 25 0 1 0 158556414 220041216 38264 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38264 108 232 0 53486 0
Current children cumulated CPU time (s) 1797.49
Current children cumulated vsize (Kb) 214884

[startup+1799.21 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1798.5
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 63019 0 0 0 178912 938 0 0 25 0 1 0 158556414 220041216 38264 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551987 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38264 108 232 0 53486 0
Current children cumulated CPU time (s) 1798.5
Current children cumulated vsize (Kb) 214884

[startup+1800.21 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1799.5
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 63020 0 0 0 179012 938 0 0 25 0 1 0 158556414 220041216 38265 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38265 108 232 0 53486 0
Current children cumulated CPU time (s) 1799.5
Current children cumulated vsize (Kb) 214884

[startup+1801.22 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1800.51
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 63020 0 0 0 179113 938 0 0 25 0 1 0 158556414 220041216 38265 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38265 108 232 0 53486 0
Current children cumulated CPU time (s) 1800.51
Current children cumulated vsize (Kb) 214884



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.22 s]
/proc/loadavg: 0.99 0.97 0.97 2/64 2789
/proc/meminfo: memFree=1240192/2055920 swapFree=4168420/4192956
[pid=2617] ppid=2615 vsize=214884 CPUtime=1800.51
/proc/2617/stat : 2617 (PBS4L) R 2615 2617 2544 0 -1 4194304 63020 0 0 0 179113 938 0 0 25 0 1 0 158556414 220041216 38265 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552434 0 0 4096 0 0 0 0 17 1 0 0
/proc/2617/statm: 53721 38265 108 232 0 53486 0
Current children cumulated CPU time (s) 1800.51
Current children cumulated vsize (Kb) 214884

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.26
CPU time (s): 1800.55
CPU user time (s): 1791.14
CPU system time (s): 9.41557
CPU usage (%): 99.9609
Max. virtual memory (cumulated for all children) (Kb): 214884
The end

Launcher Data (download as text)

Begin job on node54 on Fri Jul 28 20:01:03 UTC 2006


FILE ID= 50583-1154116862

PBS_JOBID= 886749

BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.02.opb
COMMAND LINE= ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node54/50583-1154116862/instance-50583-1154116862.opb 186069432
RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node54/watcher-50583-1154116862 -o ROOT/results/node54/solver-50583-1154116862 -C 1800 -M 1800 -S 64  ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node54/50583-1154116862/instance-50583-1154116862.opb 186069432

MD5SUM SOLVER= ab46593c31a6a47b9d9920387a00d332
MD5SUM BENCH=  88c0da0b31a99941a4f2c09165ead688

RANDOM SEED= 186069432

TIMEOUT= 1800 seconds


/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.256
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.256
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1391768 kB
Buffers:         36360 kB
Cached:         550636 kB
SwapCached:      18680 kB
Active:          92404 kB
Inactive:       519024 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1391768 kB
SwapTotal:     4192956 kB
SwapFree:      4168420 kB
Dirty:             208 kB
Writeback:           0 kB
Mapped:          15728 kB
Slab:            38276 kB
Committed_AS:   656180 kB
PageTables:       1664 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB


End job on node54 on Fri Jul 28 20:31:05 UTC 2006