Trace number 50578

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS 4.1L? (TO) 1800.63 1801.22

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-unif-100_100.08.opb
MD5SUM7e2e59a69914c0aa8f6d18f073e252a7
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark34
Best CPU time to get the best result obtained on this benchmark104.251
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 34
Optimality of the best value was proved YES
Number of variables9457
Total number of constraints449183
Number of constraints which are clauses446880
Number of constraints which are cardinality constraints (but not clauses)2303
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint98
Number of terms in the objective function 98
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 98
Number of bits of the sum of numbers in the objective function 7
Biggest number in a constraint 96
Number of bits of the biggest number in a constraint 7
Biggest sum of numbers in a constraint 194
Number of bits of the biggest sum of numbers8
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00	c Solving ROOT/tmp/node19/50578-1154115143/instance-50578-1154115143.opb ......
4.71	c done parsing opb.
4.71	o 98
4.71	o 97
4.72	o 96
4.73	o 95
4.74	o 94
4.75	o 93
4.75	o 92
4.76	o 91
4.77	o 90
4.78	o 89
4.79	o 88
4.79	o 87
4.80	o 86
4.81	o 85
4.82	o 84
4.82	o 83
4.83	o 82
4.84	o 81
4.85	o 80
4.86	o 79
4.86	o 78
4.87	o 77
4.88	o 76
4.89	o 75
4.90	o 74
4.90	o 73
4.91	o 72
4.92	o 71
4.93	o 70
4.94	o 69
4.94	o 68
4.95	o 67
4.96	o 66
4.97	o 65
4.98	o 64
4.98	o 63
4.99	o 62
5.00	o 61
5.01	o 60
5.02	o 59
5.02	o 58
5.03	o 57
5.33	o 56
5.50	o 55
5.57	o 54
7.23	o 53
7.66	o 52
8.43	o 51
12.41	o 50
13.62	o 49
19.40	o 47
19.50	o 45
19.56	o 44
20.44	o 43
510.62	o 42
727.84	o 41

Verifier Data (download as text)

ERROR: no interpretation found !

Watcher Data (download as text)

Enforcing CPU limit (will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime (will send SIGXCPU) limit: 1830 seconds
Enforcing Stack size limit: 67108864 bytes

runsolver version 3.0.3 (c) roussel@cril.univ-artois.fr

Enforcing memory limit (will send SIGKILL): 1843200 Kb
Enforcing VSIZE limit: 1887436800 bytes
command line: runsolver --timestamp -w ROOT/results/node19/watcher-50578-1154115143 -o ROOT/results/node19/solver-50578-1154115143 -C 1800 -M 1800 -S 64 ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node19/50578-1154115143/instance-50578-1154115143.opb 111152851 

Current StackSize limit: 67108864 bytes

/proc/loadavg: 1.13 1.03 1.01 3/64 28938
/proc/meminfo: memFree=1464728/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=2288 CPUtime=0
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 181 0 0 0 0 0 0 0 18 0 1 0 158374867 2342912 164 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134598917 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 572 166 90 232 0 337 0

[startup+10.0029 s]
/proc/loadavg: 1.11 1.03 1.01 2/64 28938
/proc/meminfo: memFree=1429720/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=54728 CPUtime=9.98
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 12111 0 0 0 984 14 0 0 25 0 1 0 158374867 56041472 8954 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 13682 8954 108 232 0 13447 0
Current children cumulated CPU time (s) 9.98
Current children cumulated vsize (Kb) 54728

[startup+20.01 s]
/proc/loadavg: 1.09 1.03 1.01 2/64 28938
/proc/meminfo: memFree=1425688/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=55260 CPUtime=19.99
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 13134 0 0 0 1974 25 0 0 25 0 1 0 158374867 56586240 9977 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552208 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 13815 9977 108 232 0 13580 0
Current children cumulated CPU time (s) 19.99
Current children cumulated vsize (Kb) 55260

[startup+30.0161 s]
/proc/loadavg: 1.08 1.03 1.01 2/64 28938
/proc/meminfo: memFree=1423384/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=55584 CPUtime=30
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 13732 0 0 0 2963 37 0 0 25 0 1 0 158374867 56918016 10575 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552023 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 13896 10575 108 232 0 13661 0
Current children cumulated CPU time (s) 30
Current children cumulated vsize (Kb) 55584

[startup+40.0222 s]
/proc/loadavg: 1.07 1.03 1.00 2/64 28938
/proc/meminfo: memFree=1420760/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=55800 CPUtime=40
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 14404 0 0 0 3954 46 0 0 25 0 1 0 158374867 57139200 11247 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552640 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 13950 11247 108 232 0 13715 0
Current children cumulated CPU time (s) 40
Current children cumulated vsize (Kb) 55800

[startup+50.0282 s]
/proc/loadavg: 1.06 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1418264/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=56008 CPUtime=50
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 15036 0 0 0 4945 55 0 0 25 0 1 0 158374867 57352192 11879 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 14002 11879 108 232 0 13767 0
Current children cumulated CPU time (s) 50
Current children cumulated vsize (Kb) 56008

[startup+60.0343 s]
/proc/loadavg: 1.05 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1416088/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=56324 CPUtime=60
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 15572 0 0 0 5936 64 0 0 25 0 1 0 158374867 57675776 12415 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 14081 12415 108 232 0 13846 0
Current children cumulated CPU time (s) 60
Current children cumulated vsize (Kb) 56324

[startup+70.0414 s]
/proc/loadavg: 1.04 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1414104/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=56492 CPUtime=70.01
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 16084 0 0 0 6929 72 0 0 25 0 1 0 158374867 57847808 12927 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 14123 12927 108 232 0 13888 0
Current children cumulated CPU time (s) 70.01
Current children cumulated vsize (Kb) 56492

[startup+80.0485 s]
/proc/loadavg: 1.03 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1412184/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=56756 CPUtime=80.01
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 16560 0 0 0 7922 79 0 0 25 0 1 0 158374867 58118144 13403 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 14189 13403 108 232 0 13954 0
Current children cumulated CPU time (s) 80.01
Current children cumulated vsize (Kb) 56756

[startup+90.0546 s]
/proc/loadavg: 1.03 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1409816/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=89720 CPUtime=90.02
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 17149 0 0 0 8915 87 0 0 25 0 1 0 158374867 91873280 13992 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22430 13992 108 232 0 22195 0
Current children cumulated CPU time (s) 90.02
Current children cumulated vsize (Kb) 89720

[startup+100.061 s]
/proc/loadavg: 1.02 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1407576/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=89944 CPUtime=100.02
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 17707 0 0 0 9908 94 0 0 25 0 1 0 158374867 92102656 14550 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22486 14550 108 232 0 22251 0
Current children cumulated CPU time (s) 100.02
Current children cumulated vsize (Kb) 89944

[startup+110.067 s]
/proc/loadavg: 1.02 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1406040/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=90200 CPUtime=110.02
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 18081 0 0 0 10903 99 0 0 25 0 1 0 158374867 92364800 14924 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22550 14924 108 232 0 22315 0
Current children cumulated CPU time (s) 110.02
Current children cumulated vsize (Kb) 90200

[startup+120.073 s]
/proc/loadavg: 1.02 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1404632/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=90408 CPUtime=120.02
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 18432 0 0 0 11897 105 0 0 25 0 1 0 158374867 92577792 15275 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22602 15275 108 232 0 22367 0
Current children cumulated CPU time (s) 120.02
Current children cumulated vsize (Kb) 90408

[startup+130.079 s]
/proc/loadavg: 1.01 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1402072/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=90676 CPUtime=130.03
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 19075 0 0 0 12892 111 0 0 25 0 1 0 158374867 92852224 15918 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22669 15918 108 232 0 22434 0
Current children cumulated CPU time (s) 130.03
Current children cumulated vsize (Kb) 90676

[startup+140.085 s]
/proc/loadavg: 1.01 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1401112/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=90756 CPUtime=140.03
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 19322 0 0 0 13884 119 0 0 25 0 1 0 158374867 92934144 16165 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552208 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22689 16165 108 232 0 22454 0
Current children cumulated CPU time (s) 140.03
Current children cumulated vsize (Kb) 90756

[startup+150.091 s]
/proc/loadavg: 1.01 1.02 1.00 2/64 28938
/proc/meminfo: memFree=1399896/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=90916 CPUtime=150.03
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 19616 0 0 0 14877 126 0 0 25 0 1 0 158374867 93097984 16459 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552208 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22729 16459 108 232 0 22494 0
Current children cumulated CPU time (s) 150.03
Current children cumulated vsize (Kb) 90916

[startup+160.097 s]
/proc/loadavg: 1.01 1.01 1.00 2/64 28938
/proc/meminfo: memFree=1397848/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=91108 CPUtime=160.04
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 20131 0 0 0 15870 134 0 0 25 0 1 0 158374867 93294592 16974 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22777 16974 108 232 0 22542 0
Current children cumulated CPU time (s) 160.04
Current children cumulated vsize (Kb) 91108

[startup+170.103 s]
/proc/loadavg: 1.00 1.01 1.00 2/64 28938
/proc/meminfo: memFree=1397016/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=91204 CPUtime=170.04
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 20337 0 0 0 16865 139 0 0 25 0 1 0 158374867 93392896 17180 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134546505 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22801 17180 108 232 0 22566 0
Current children cumulated CPU time (s) 170.04
Current children cumulated vsize (Kb) 91204

[startup+180.109 s]
/proc/loadavg: 1.00 1.01 1.00 2/64 28938
/proc/meminfo: memFree=1395224/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=91492 CPUtime=180.04
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 20770 0 0 0 17859 145 0 0 25 0 1 0 158374867 93687808 17613 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22873 17613 108 232 0 22638 0
Current children cumulated CPU time (s) 180.04
Current children cumulated vsize (Kb) 91492

[startup+190.116 s]
/proc/loadavg: 1.00 1.01 1.00 2/64 28938
/proc/meminfo: memFree=1393496/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=91620 CPUtime=190.04
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 21199 0 0 0 18854 150 0 0 25 0 1 0 158374867 93818880 18042 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22905 18042 108 232 0 22670 0
Current children cumulated CPU time (s) 190.04
Current children cumulated vsize (Kb) 91620

[startup+200.121 s]
/proc/loadavg: 1.00 1.01 1.00 2/64 28938
/proc/meminfo: memFree=1392536/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=91908 CPUtime=200.05
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 21446 0 0 0 19848 157 0 0 25 0 1 0 158374867 94113792 18289 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 22977 18289 108 232 0 22742 0
Current children cumulated CPU time (s) 200.05
Current children cumulated vsize (Kb) 91908

[startup+210.127 s]
/proc/loadavg: 1.00 1.01 1.00 2/64 28938

################
# More data... #
################

/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55148 0 0 0 177377 773 0 0 25 0 1 0 158374867 322752512 48852 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552208 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48852 108 232 0 78562 0
Current children cumulated CPU time (s) 1781.5
Current children cumulated vsize (Kb) 315188

[startup+1783.09 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269336/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1782.5
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55149 0 0 0 177477 773 0 0 25 0 1 0 158374867 322752512 48853 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48853 108 232 0 78562 0
Current children cumulated CPU time (s) 1782.5
Current children cumulated vsize (Kb) 315188

[startup+1784.1 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269336/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1783.5
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55150 0 0 0 177577 773 0 0 25 0 1 0 158374867 322752512 48854 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48854 108 232 0 78562 0
Current children cumulated CPU time (s) 1783.5
Current children cumulated vsize (Kb) 315188

[startup+1785.1 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269336/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1784.51
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55151 0 0 0 177677 774 0 0 25 0 1 0 158374867 322752512 48855 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552496 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48855 108 232 0 78562 0
Current children cumulated CPU time (s) 1784.51
Current children cumulated vsize (Kb) 315188

[startup+1786.11 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269336/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1785.51
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55151 0 0 0 177777 774 0 0 25 0 1 0 158374867 322752512 48855 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134550377 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48855 108 232 0 78562 0
Current children cumulated CPU time (s) 1785.51
Current children cumulated vsize (Kb) 315188

[startup+1787.11 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269336/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1786.51
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55154 0 0 0 177877 774 0 0 25 0 1 0 158374867 322752512 48858 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48858 108 232 0 78562 0
Current children cumulated CPU time (s) 1786.51
Current children cumulated vsize (Kb) 315188

[startup+1788.12 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269336/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1787.52
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55156 0 0 0 177977 775 0 0 25 0 1 0 158374867 322752512 48860 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48860 108 232 0 78562 0
Current children cumulated CPU time (s) 1787.52
Current children cumulated vsize (Kb) 315188

[startup+1789.12 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269336/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1788.53
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55157 0 0 0 178078 775 0 0 25 0 1 0 158374867 322752512 48861 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48861 108 232 0 78562 0
Current children cumulated CPU time (s) 1788.53
Current children cumulated vsize (Kb) 315188

[startup+1790.13 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269336/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1789.53
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55158 0 0 0 178178 775 0 0 25 0 1 0 158374867 322752512 48862 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48862 108 232 0 78562 0
Current children cumulated CPU time (s) 1789.53
Current children cumulated vsize (Kb) 315188

[startup+1791.13 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269208/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1790.54
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55177 0 0 0 178278 776 0 0 25 0 1 0 158374867 322752512 48881 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48881 108 232 0 78562 0
Current children cumulated CPU time (s) 1790.54
Current children cumulated vsize (Kb) 315188

[startup+1792.14 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269144/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1791.54
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55202 0 0 0 178378 776 0 0 25 0 1 0 158374867 322752512 48906 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134550847 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48906 108 232 0 78562 0
Current children cumulated CPU time (s) 1791.54
Current children cumulated vsize (Kb) 315188

[startup+1793.14 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269144/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1792.54
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55204 0 0 0 178478 776 0 0 25 0 1 0 158374867 322752512 48908 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48908 108 232 0 78562 0
Current children cumulated CPU time (s) 1792.54
Current children cumulated vsize (Kb) 315188

[startup+1794.15 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269144/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1793.55
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55205 0 0 0 178578 777 0 0 25 0 1 0 158374867 322752512 48909 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552208 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48909 108 232 0 78562 0
Current children cumulated CPU time (s) 1793.55
Current children cumulated vsize (Kb) 315188

[startup+1795.15 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269144/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1794.55
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55205 0 0 0 178678 777 0 0 25 0 1 0 158374867 322752512 48909 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48909 108 232 0 78562 0
Current children cumulated CPU time (s) 1794.55
Current children cumulated vsize (Kb) 315188

[startup+1796.16 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269144/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1795.56
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55206 0 0 0 178778 778 0 0 25 0 1 0 158374867 322752512 48910 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48910 108 232 0 78562 0
Current children cumulated CPU time (s) 1795.56
Current children cumulated vsize (Kb) 315188

[startup+1797.16 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269080/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1796.56
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55208 0 0 0 178878 778 0 0 25 0 1 0 158374867 322752512 48912 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48912 108 232 0 78562 0
Current children cumulated CPU time (s) 1796.56
Current children cumulated vsize (Kb) 315188

[startup+1798.17 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269080/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1797.57
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55210 0 0 0 178978 779 0 0 25 0 1 0 158374867 322752512 48914 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48914 108 232 0 78562 0
Current children cumulated CPU time (s) 1797.57
Current children cumulated vsize (Kb) 315188

[startup+1799.17 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269080/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1798.57
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55211 0 0 0 179078 779 0 0 25 0 1 0 158374867 322752512 48915 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48915 108 232 0 78562 0
Current children cumulated CPU time (s) 1798.57
Current children cumulated vsize (Kb) 315188

[startup+1800.18 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269080/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1799.58
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55214 0 0 0 179179 779 0 0 25 0 1 0 158374867 322752512 48918 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48918 108 232 0 78562 0
Current children cumulated CPU time (s) 1799.58
Current children cumulated vsize (Kb) 315188

[startup+1801.18 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269080/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1800.58
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55215 0 0 0 179279 779 0 0 25 0 1 0 158374867 322752512 48919 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48919 108 232 0 78562 0
Current children cumulated CPU time (s) 1800.58
Current children cumulated vsize (Kb) 315188



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.18 s]
/proc/loadavg: 1.00 1.00 1.00 2/64 29138
/proc/meminfo: memFree=1269080/2055920 swapFree=4183080/4192956
[pid=28938] ppid=28936 vsize=315188 CPUtime=1800.58
/proc/28938/stat : 28938 (PBS4L) R 28936 28938 28889 0 -1 4194304 55215 0 0 0 179279 779 0 0 25 0 1 0 158374867 322752512 48919 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/28938/statm: 78797 48919 108 232 0 78562 0
Current children cumulated CPU time (s) 1800.58
Current children cumulated vsize (Kb) 315188

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.22
CPU time (s): 1800.63
CPU user time (s): 1792.8
CPU system time (s): 7.82981
CPU usage (%): 99.9668
Max. virtual memory (cumulated for all children) (Kb): 315188
The end

Launcher Data (download as text)

Begin job on node19 on Fri Jul 28 19:32:24 UTC 2006


FILE ID= 50578-1154115143

PBS_JOBID= 886684

BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-unif-100_100.08.opb
COMMAND LINE= ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node19/50578-1154115143/instance-50578-1154115143.opb 111152851
RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node19/watcher-50578-1154115143 -o ROOT/results/node19/solver-50578-1154115143 -C 1800 -M 1800 -S 64  ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node19/50578-1154115143/instance-50578-1154115143.opb 111152851

MD5SUM SOLVER= ab46593c31a6a47b9d9920387a00d332
MD5SUM BENCH=  7e2e59a69914c0aa8f6d18f073e252a7

RANDOM SEED= 111152851

TIMEOUT= 1800 seconds


/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.233
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.233
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1465128 kB
Buffers:         27432 kB
Cached:         504920 kB
SwapCached:       3556 kB
Active:          70692 kB
Inactive:       470184 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1465128 kB
SwapTotal:     4192956 kB
SwapFree:      4183080 kB
Dirty:             192 kB
Writeback:           0 kB
Mapped:          14508 kB
Slab:            35884 kB
Committed_AS:   778012 kB
PageTables:       1484 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB


End job on node19 on Fri Jul 28 20:02:25 UTC 2006