Solver Name | Answer | objective function | CPU time | Wall clock time |
---|---|---|---|---|
PBPASSolver 2010-06-13 | ? (MO) | 13.08 | 13.4156 |
Name | normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/ haplotype/normalized-simp-nonunif-100_100.12.opb |
MD5SUM | b1eab2cf935e923f8f1ff9f24be23d02 |
Bench Category | OPT-SMALLINT (optimisation, small integers) |
Best result obtained on this benchmark | OPT |
Best value of the objective obtained on this benchmark | 41 |
Best CPU time to get the best result obtained on this benchmark | 874.009 |
Has Objective Function | YES |
Satisfiable | YES |
(Un)Satisfiability was proved | YES |
Best value of the objective function | 41 |
Optimality of the best value was proved | YES |
Number of variables | 25484 |
Total number of constraints | 1553328 |
Number of constraints which are clauses | 1549096 |
Number of constraints which are cardinality constraints (but not clauses) | 4232 |
Number of constraints which are nor clauses,nor cardinality constraints | 0 |
Minimum length of a constraint | 1 |
Maximum length of a constraint | 184 |
Number of terms in the objective function | 184 |
Biggest coefficient in the objective function | 1 |
Number of bits for the biggest coefficient in the objective function | 1 |
Sum of the numbers in the objective function | 184 |
Number of bits of the sum of numbers in the objective function | 8 |
Biggest number in a constraint | 182 |
Number of bits of the biggest number in a constraint | 8 |
Biggest sum of numbers in a constraint | 366 |
Number of bits of the biggest sum of numbers | 9 |
Number of products (including duplicates) | 0 |
Sum of products size (including duplicates) | 0 |
Number of different products | 0 |
Sum of products size | 0 |
13.08/13.41 c 25484 1553328 0 0 0 0 0 0
ERROR: no interpretation found !
runsolver version 3.2.9 (svn:492) (c) roussel@cril.univ-artois.fr command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-2673928-1276804387/watcher-2673928-1276804387 -o /tmp/evaluation-result-2673928-1276804387/solver-2673928-1276804387 -C 1800 -W 2000 -M 1800 run HOME/instance-2673928-1276804387.opb Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 2000 seconds Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB Current StackSize limit: 10240 KiB [startup+0 s] /proc/loadavg: 0.92 0.98 0.99 3/105 23185 /proc/meminfo: memFree=1791976/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 [startup+0.0849989 s] /proc/loadavg: 0.92 0.98 0.99 3/105 23185 /proc/meminfo: memFree=1791976/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 Current children cumulated CPU time (s) 0 Current children cumulated vsize (KiB) 8700 [startup+0.100999 s] /proc/loadavg: 0.92 0.98 0.99 3/105 23185 /proc/meminfo: memFree=1791976/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 Current children cumulated CPU time (s) 0 Current children cumulated vsize (KiB) 8700 [startup+0.301018 s] /proc/loadavg: 0.92 0.98 0.99 3/105 23185 /proc/meminfo: memFree=1791976/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 Current children cumulated CPU time (s) 0 Current children cumulated vsize (KiB) 8700 [startup+0.701057 s] /proc/loadavg: 0.92 0.98 0.99 3/105 23185 /proc/meminfo: memFree=1791976/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 Current children cumulated CPU time (s) 0 Current children cumulated vsize (KiB) 8700 [startup+1.50113 s] /proc/loadavg: 0.93 0.98 0.99 2/107 23188 /proc/meminfo: memFree=1574464/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 [pid=23187] ppid=23185 vsize=316356 CPUtime=1.49 /proc/23187/stat : 23187 (PBPASSolver) R 23185 23185 22785 0 -1 4202496 78552 0 0 0 60 89 0 0 25 0 1 0 21732498 323948544 78490 1992294400 134512640 134902295 4292460544 18446744073709551615 134586919 0 0 4096 17608 0 0 0 17 1 0 0 0 /proc/23187/statm: 79089 78494 256 96 0 78301 0 Current children cumulated CPU time (s) 1.49 Current children cumulated vsize (KiB) 325056 [startup+3.10129 s] /proc/loadavg: 0.93 0.98 0.99 2/107 23188 /proc/meminfo: memFree=1368376/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 [pid=23187] ppid=23185 vsize=596260 CPUtime=3.09 /proc/23187/stat : 23187 (PBPASSolver) R 23185 23185 22785 0 -1 4202496 148557 0 0 0 142 167 0 0 25 0 1 0 21732498 610570240 148495 1992294400 134512640 134902295 4292460544 18446744073709551615 134588399 0 0 4096 17608 0 0 0 17 1 0 0 0 /proc/23187/statm: 149065 148495 256 96 0 148277 0 Current children cumulated CPU time (s) 3.09 Current children cumulated vsize (KiB) 604960 [startup+6.3006 s] /proc/loadavg: 0.93 0.98 0.99 2/107 23188 /proc/meminfo: memFree=844600/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 [pid=23187] ppid=23185 vsize=1071140 CPUtime=6.28 /proc/23187/stat : 23187 (PBPASSolver) R 23185 23185 22785 0 -1 4202496 267214 0 0 0 326 302 0 0 25 0 1 0 21732498 1096847360 267152 1992294400 134512640 134902295 4292460544 18446744073709551615 4294960144 0 0 4096 17608 0 0 0 17 1 0 0 0 /proc/23187/statm: 267785 267157 256 96 0 266997 0 Current children cumulated CPU time (s) 6.28 Current children cumulated vsize (KiB) 1079840 [startup+12.7012 s] /proc/loadavg: 1.25 1.05 1.02 2/107 23190 /proc/meminfo: memFree=44428/2059040 swapFree=4140140/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 [pid=23187] ppid=23185 vsize=1809732 CPUtime=12.69 /proc/23187/stat : 23187 (PBPASSolver) R 23185 23185 22785 0 -1 4202496 451869 0 0 0 756 513 0 0 25 0 1 0 21732498 1853165568 451807 1992294400 134512640 134902295 4292460544 18446744073709551615 4294960144 0 0 4096 17608 0 0 0 17 1 0 0 0 /proc/23187/statm: 452433 451807 256 96 0 451645 0 Current children cumulated CPU time (s) 12.69 Current children cumulated vsize (KiB) 1818432 Maximum VSize exceeded: sending SIGTERM then SIGKILL [startup+13.4013 s] /proc/loadavg: 1.25 1.05 1.02 3/107 23190 /proc/meminfo: memFree=9816/2059040 swapFree=4140128/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 [pid=23187] ppid=23185 vsize=1837252 CPUtime=13.08 /proc/23187/stat : 23187 (PBPASSolver) R 23185 23185 22785 0 -1 4202496 458793 0 0 0 783 525 0 0 24 0 1 0 21732498 1881346048 458731 1992294400 134512640 134902295 4292460544 18446744073709551615 134588399 0 0 4096 17608 0 0 0 17 0 0 0 30 /proc/23187/statm: 459313 458731 256 96 0 458525 0 Current children cumulated CPU time (s) 13.08 Current children cumulated vsize (KiB) 1845952 Sending SIGTERM to process tree (bottom up) Sleeping 2 seconds Solver just ended. Dumping a history of the last processes samples [startup+13.4013 s] /proc/loadavg: 1.25 1.05 1.02 3/107 23190 /proc/meminfo: memFree=9816/2059040 swapFree=4140128/4192956 [pid=23185] ppid=23183 vsize=8700 CPUtime=0 /proc/23185/stat : 23185 (run) S 23183 23185 22785 0 -1 4202496 388 134 0 0 0 0 0 0 25 0 1 0 21732498 8908800 250 1992294400 4194304 4922060 140735431855056 18446744073709551615 207239093381 0 65536 4100 65538 18446744071562232103 0 0 17 1 0 0 0 /proc/23185/statm: 2175 250 211 178 0 68 0 [pid=23187] ppid=23185 vsize=1837252 CPUtime=13.08 /proc/23187/stat : 23187 (PBPASSolver) R 23185 23185 22785 0 -1 4202496 458793 0 0 0 783 525 0 0 24 0 1 0 21732498 1881346048 458731 1992294400 134512640 134902295 4292460544 18446744073709551615 134588399 0 0 4096 17608 0 0 0 17 0 0 0 30 /proc/23187/statm: 459313 458731 256 96 0 458525 0 Current children cumulated CPU time (s) 13.08 Current children cumulated vsize (KiB) 1845952 Child ended because it received signal 15 (SIGTERM) # WARNING: # CPU time reported by wait4() is probably wrong ! # wait4(...,&childrusage) returns 23185 and gives # childrusage.ru_utime.tv_sec=0 # childrusage.ru_utime.tv_usec=0 # childrusage.ru_stime.tv_sec=0 # childrusage.ru_stime.tv_usec=2999 # CPU time returned by wait4() is 0.002999 # while last known CPU time is 13.08 # # Solver probably didn't/couldn't wait for its children # Using CPU time of the last sample as value... Real time (s): 13.4156 CPU time (s): 13.08 CPU user time (s): 7.83 CPU system time (s): 5.25 CPU usage (%): 97.4987 Max. virtual memory (cumulated for all children) (KiB): 1845952 getrusage(RUSAGE_CHILDREN,...) data: user time used= 0 system time used= 0.002999 maximum resident set size= 0 integral shared memory size= 0 integral unshared data size= 0 integral unshared stack size= 0 page reclaims= 522 page faults= 0 swaps= 0 block input operations= 0 block output operations= 0 messages sent= 0 messages received= 0 signals received= 0 voluntary context switches= 4 involuntary context switches= 4 runsolver used 0.022996 second user time and 0.084987 second system time The end
Begin job on node089 at 2010-06-17 21:53:10 IDJOB=2673928 IDBENCH=2954 IDSOLVER=1174 FILE ID=node089/2673928-1276804387 PBS_JOBID= 11176639 Free space on /tmp= 62496 MiB SOLVER NAME= PBPASSolver 2010-06-13 BENCH NAME= PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.12.opb COMMAND LINE= run BENCHNAME RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-2673928-1276804387/watcher-2673928-1276804387 -o /tmp/evaluation-result-2673928-1276804387/solver-2673928-1276804387 -C 1800 -W 2000 -M 1800 run HOME/instance-2673928-1276804387.opb TIME LIMIT= 1800 seconds MEMORY LIMIT= 1800 MiB MAX NB THREAD= 0 MD5SUM BENCH= b1eab2cf935e923f8f1ff9f24be23d02 RANDOM SEED=1578208164 node089.alineos.net Linux 2.6.18-164.el5 #1 SMP Thu Sep 3 03:28:30 EDT 2009 /proc/cpuinfo: processor : 0 vendor_id : GenuineIntel cpu family : 15 model : 4 model name : Intel(R) Xeon(TM) CPU 3.00GHz stepping : 3 cpu MHz : 3000.244 cache size : 2048 KB physical id : 0 siblings : 1 core id : 0 cpu cores : 1 apicid : 0 fpu : yes fpu_exception : yes cpuid level : 5 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm constant_tsc pni monitor ds_cpl cid cx16 xtpr bogomips : 6000.48 clflush size : 64 cache_alignment : 128 address sizes : 36 bits physical, 48 bits virtual power management: processor : 1 vendor_id : GenuineIntel cpu family : 15 model : 4 model name : Intel(R) Xeon(TM) CPU 3.00GHz stepping : 3 cpu MHz : 3000.244 cache size : 2048 KB physical id : 3 siblings : 1 core id : 0 cpu cores : 1 apicid : 6 fpu : yes fpu_exception : yes cpuid level : 5 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm constant_tsc pni monitor ds_cpl cid cx16 xtpr bogomips : 5999.47 clflush size : 64 cache_alignment : 128 address sizes : 36 bits physical, 48 bits virtual power management: /proc/meminfo: MemTotal: 2059040 kB MemFree: 1792496 kB Buffers: 33460 kB Cached: 142300 kB SwapCached: 5700 kB Active: 117008 kB Inactive: 71040 kB HighTotal: 0 kB HighFree: 0 kB LowTotal: 2059040 kB LowFree: 1792496 kB SwapTotal: 4192956 kB SwapFree: 4140140 kB Dirty: 55968 kB Writeback: 0 kB AnonPages: 10856 kB Mapped: 12900 kB Slab: 56872 kB PageTables: 3956 kB NFS_Unstable: 0 kB Bounce: 0 kB CommitLimit: 5222476 kB Committed_AS: 182248 kB VmallocTotal: 34359738367 kB VmallocUsed: 264948 kB VmallocChunk: 34359471699 kB HugePages_Total: 0 HugePages_Free: 0 HugePages_Rsvd: 0 Hugepagesize: 2048 kB Free space on /tmp at the end= 62496 MiB End job on node089 at 2010-06-17 21:53:25