Solver Name | Answer | objective function | CPU time | Wall clock time |
---|---|---|---|---|
SCIPspx SCIP 1.2.1.2 with SoPlex 1.4.2 (CVS Version 30.5.2010) as LP solver | ? (TO) | 1802.09 | 1802.65 |
Name | normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/ haplotype/normalized-simp-unif-100_100.00.opb |
MD5SUM | 9e8d546df5cfe52cfb5a29d8ae802e41 |
Bench Category | OPT-SMALLINT (optimisation, small integers) |
Best result obtained on this benchmark | SAT |
Best value of the objective obtained on this benchmark | 34 |
Best CPU time to get the best result obtained on this benchmark | 1800.34 |
Has Objective Function | YES |
Satisfiable | YES |
(Un)Satisfiability was proved | YES |
Best value of the objective function | 34 |
Optimality of the best value was proved | YES |
Number of variables | 8601 |
Total number of constraints | 386810 |
Number of constraints which are clauses | 384742 |
Number of constraints which are cardinality constraints (but not clauses) | 2068 |
Number of constraints which are nor clauses,nor cardinality constraints | 0 |
Minimum length of a constraint | 1 |
Maximum length of a constraint | 94 |
Number of terms in the objective function | 94 |
Biggest coefficient in the objective function | 1 |
Number of bits for the biggest coefficient in the objective function | 1 |
Sum of the numbers in the objective function | 94 |
Number of bits of the sum of numbers in the objective function | 7 |
Biggest number in a constraint | 92 |
Number of bits of the biggest number in a constraint | 7 |
Biggest sum of numbers in a constraint | 186 |
Number of bits of the biggest sum of numbers | 8 |
Number of products (including duplicates) | 0 |
Sum of products size (including duplicates) | 0 |
Number of different products | 0 |
Sum of products size | 0 |
0.00/0.00 c SCIP version 1.2.1.2 [precision: 8 byte] [memory: block] [mode: optimized] [LP solver: SoPlex 1.4.2] [Expressions interpreter: NONE] 0.00/0.00 c Copyright (c) 2002-2010 Konrad-Zuse-Zentrum fuer Informationstechnik Berlin (ZIB) 0.00/0.00 c 0.00/0.00 c user parameter file <scip.set> not found - using default parameters 0.00/0.00 c reading problem <HOME/instance-2666926-1276623872.opb> 6.79/6.81 c original problem has 8601 variables (8601 bin, 0 int, 0 impl, 0 cont) and 386810 constraints 6.79/6.81 c problem read 6.79/6.81 c presolving settings loaded 7.89/7.94 c presolving: 10.69/10.78 c (round 1) 5265 del vars, 345933 del conss, 4993 chg bounds, 90 chg sides, 180 chg coeffs, 0 upgd conss, 589867 impls, 0 clqs 10.79/10.85 c (round 2) 5267 del vars, 349406 del conss, 4993 chg bounds, 90 chg sides, 180 chg coeffs, 0 upgd conss, 589867 impls, 0 clqs 11.29/11.33 c (round 3) 5267 del vars, 349406 del conss, 4993 chg bounds, 90 chg sides, 180 chg coeffs, 37404 upgd conss, 589867 impls, 0 clqs 15.19/15.22 c (7.6s) probing: 1000/3334 (30.0%) - 0 fixings, 0 aggregations, 1223 implications, 0 bound changes 18.99/19.09 c (11.5s) probing: 2000/3334 (60.0%) - 0 fixings, 0 aggregations, 2560 implications, 0 bound changes 18.99/19.09 c (11.5s) probing: 2001/3334 (60.0%) - 0 fixings, 0 aggregations, 2561 implications, 0 bound changes 18.99/19.09 c (11.5s) probing aborted: 2000/2000 successive useless probings 18.99/19.09 c presolving (4 rounds): 18.99/19.09 c 5267 deleted vars, 349406 deleted constraints, 4993 tightened bounds, 0 added holes, 90 changed sides, 180 changed coefficients 18.99/19.09 c 597293 implications, 0 cliques 18.99/19.09 c presolved problem has 3334 variables (3334 bin, 0 int, 0 impl, 0 cont) and 37404 constraints 18.99/19.09 c 37404 constraints of type <logicor> 18.99/19.09 c transformed objective value is always integral (scale: 1) 18.99/19.09 c Presolving Time: 10.65 18.99/19.09 c - non default parameters ---------------------------------------------------------------------- 18.99/19.09 c # SCIP version 1.2.1.2 18.99/19.09 c 18.99/19.09 c # maximal number of intermediate conflict constraints generated in conflict graph (-1: use every intermediate constraint) 18.99/19.09 c # [type: int, range: [-1,2147483647], default: -1] 18.99/19.09 c conflict/interconss = 0 18.99/19.09 c 18.99/19.09 c # should binary conflicts be preferred? 18.99/19.09 c # [type: bool, range: {TRUE,FALSE}, default: FALSE] 18.99/19.09 c conflict/preferbinary = TRUE 18.99/19.09 c 18.99/19.09 c # maximum age an unnecessary constraint can reach before it is deleted (0: dynamic, -1: keep all constraints) 18.99/19.09 c # [type: int, range: [-1,2147483647], default: 0] 18.99/19.09 c constraints/agelimit = 1 18.99/19.09 c 18.99/19.09 c # should enforcement of pseudo solution be disabled? 18.99/19.09 c # [type: bool, range: {TRUE,FALSE}, default: FALSE] 18.99/19.09 c constraints/disableenfops = TRUE 18.99/19.09 c 18.99/19.09 c # frequency for displaying node information lines 18.99/19.09 c # [type: int, range: [-1,2147483647], default: 100] 18.99/19.09 c display/freq = 10000 18.99/19.09 c 18.99/19.09 c # maximal time in seconds to run 18.99/19.09 c # [type: real, range: [0,1.79769313486232e+308], default: 1e+20] 18.99/19.09 c limits/time = 1793.2 18.99/19.09 c 18.99/19.09 c # maximal memory usage in MB; reported memory usage is lower than real memory usage! 18.99/19.09 c # [type: real, range: [0,1.79769313486232e+308], default: 1e+20] 18.99/19.09 c limits/memory = 1620 18.99/19.09 c 18.99/19.09 c # frequency for solving LP at the nodes (-1: never; 0: only root LP) 18.99/19.09 c # [type: int, range: [-1,2147483647], default: 1] 18.99/19.09 c lp/solvefreq = 0 18.99/19.09 c 18.99/19.09 c # LP pricing strategy ('l'pi default, 'a'uto, 'f'ull pricing, 'p'artial, 's'teepest edge pricing, 'q'uickstart steepest edge pricing, 'd'evex pricing) 18.99/19.09 c # [type: char, range: {lafpsqd}, default: l] 18.99/19.09 c lp/pricing = a 18.99/19.09 c 18.99/19.09 c # should presolving try to simplify inequalities 18.99/19.09 c # [type: bool, range: {TRUE,FALSE}, default: FALSE] 18.99/19.09 c constraints/linear/simplifyinequalities = TRUE 18.99/19.09 c 18.99/19.09 c # should presolving try to simplify knapsacks 18.99/19.09 c # [type: bool, range: {TRUE,FALSE}, default: FALSE] 18.99/19.09 c constraints/knapsack/simplifyinequalities = TRUE 18.99/19.09 c 18.99/19.09 c # priority of node selection rule <dfs> in standard mode 18.99/19.09 c # [type: int, range: [-536870912,536870911], default: 0] 18.99/19.09 c nodeselection/dfs/stdpriority = 1000000 18.99/19.09 c 18.99/19.09 c ----------------------------------------------------------------------------------------------- 18.99/19.09 c start solving 19.09/19.10 c 19.09/19.11 o 92 19.09/19.11 c time | node | left |LP iter|LP it/n| mem |mdpt |frac |vars |cons |cols |rows |cuts |confs|strbr| dualbound | primalbound | gap 19.09/19.11 c t11.5s| 1 | 0 | 0 | - | 205M| 0 | - |3334 | 37k| 0 | 0 | 0 | 0 | 0 | -- | 9.200000e+01 | Inf 32.88/32.92 c 25.1s| 1 | 0 | 5811 | - | 221M| 0 |2924 |3334 | 37k|3334 | 37k| 0 | 0 | 0 | 8.000000e+00 | 9.200000e+01 |1050.00% 154.73/154.87 c 146s| 1 | 0 | 22355 | - | 223M| 0 |1948 |3334 | 37k|3334 | 39k|2000 | 0 | 0 | 1.459328e+01 | 9.200000e+01 | 530.43% 234.12/234.21 c 223s| 1 | 0 | 29893 | - | 224M| 0 |1352 |3334 | 37k|3334 | 40k|3014 | 0 | 0 | 1.900000e+01 | 9.200000e+01 | 384.21% 270.40/270.59 c 258s| 1 | 0 | 32871 | - | 225M| 0 |1290 |3334 | 37k|3334 | 40k|3158 | 0 | 0 | 1.900000e+01 | 9.200000e+01 | 384.21% 439.85/440.04 c 408s| 1 | 0 | 34279 | - | 225M| 0 |1255 |3334 | 37k|3334 | 40k|3223 | 0 | 0 | 1.916667e+01 | 9.200000e+01 | 380.00% 488.92/489.19 c 453s| 1 | 0 | 36489 | - | 225M| 0 |1214 |3334 | 37k|3334 | 40k|3242 | 0 | 0 | 2.000000e+01 | 9.200000e+01 | 360.00% 660.57/660.82 c 605s| 1 | 0 | 37954 | - | 225M| 0 |1148 |3334 | 37k|3334 | 40k|3276 | 0 | 0 | 2.000000e+01 | 9.200000e+01 | 360.00% 792.22/792.58 c 724s| 1 | 0 | 41489 | - | 225M| 0 |1106 |3334 | 37k|3334 | 40k|3284 | 0 | 0 | 2.000000e+01 | 9.200000e+01 | 360.00% 816.82/817.19 c 748s| 1 | 0 | 43498 | - | 225M| 0 |1088 |3334 | 37k|3334 | 40k|3308 | 0 | 0 | 2.000000e+01 | 9.200000e+01 | 360.00% 982.98/983.33 c 895s| 1 | 0 | 46509 | - | 226M| 0 |1141 |3334 | 37k|3334 | 40k|3324 | 0 | 0 | 2.012500e+01 | 9.200000e+01 | 357.14% 1062.33/1062.75 c 970s| 1 | 0 | 52058 | - | 226M| 0 |1005 |3334 | 37k|3334 | 40k|3348 | 0 | 0 | 2.100000e+01 | 9.200000e+01 | 338.10% 1184.40/1184.83 c 1074s| 1 | 0 | 53836 | - | 226M| 0 |1089 |3334 | 37k|3334 | 39k|3360 | 0 | 0 | 2.100000e+01 | 9.200000e+01 | 338.10% 1370.16/1370.67 c 1240s| 1 | 0 | 58362 | - | 226M| 0 | 970 |3334 | 37k|3334 | 39k|3372 | 0 | 0 | 2.100000e+01 | 9.200000e+01 | 338.10% 1460.33/1460.87 c 1317s| 1 | 0 | 59964 | - | 226M| 0 | 986 |3334 | 37k|3334 | 39k|3395 | 0 | 0 | 2.100000e+01 | 9.200000e+01 | 338.10% 1562.69/1563.23 c time | node | left |LP iter|LP it/n| mem |mdpt |frac |vars |cons |cols |rows |cuts |confs|strbr| dualbound | primalbound | gap 1562.69/1563.23 c 1415s| 1 | 0 | 68981 | - | 226M| 0 |1175 |3334 | 37k|3334 | 39k|3417 | 0 | 0 | 2.100000e+01 | 9.200000e+01 | 338.10% 1627.49/1628.01 c 1477s| 1 | 0 | 74460 | - | 226M| 0 |1024 |3334 | 37k|3334 | 39k|3479 | 0 | 0 | 2.100000e+01 | 9.200000e+01 | 338.10% 1800.04/1800.61 c pressed CTRL-C 1 times (5 times for forcing termination)
ERROR: no interpretation found !
runsolver version 3.2.9 (svn:492) (c) roussel@cril.univ-artois.fr command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-2666926-1276623872/watcher-2666926-1276623872 -o /tmp/evaluation-result-2666926-1276623872/solver-2666926-1276623872 -C 1800 -W 2000 -M 1800 HOME/pbscip.linux.x86_64.gnu.opt.spx -f HOME/instance-2666926-1276623872.opb -t 1800 -m 1800 Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 2000 seconds Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB Current StackSize limit: 10240 KiB [startup+0 s] /proc/loadavg: 1.03 1.00 1.00 3/106 10791 /proc/meminfo: memFree=1405440/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=7724 CPUtime=0 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 1017 0 0 0 0 0 0 0 15 0 1 0 3680182 7909376 937 1992294400 4194304 8223781 140733341896352 18446744073709551615 7253477 0 0 4096 0 0 0 0 17 1 0 0 0 /proc/10791/statm: 1931 946 348 984 0 944 0 [startup+0.0224139 s] /proc/loadavg: 1.03 1.00 1.00 3/106 10791 /proc/meminfo: memFree=1405440/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=10516 CPUtime=0.01 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 1929 0 0 0 1 0 0 0 15 0 1 0 3680182 10768384 1849 1992294400 4194304 8223781 140733341896352 18446744073709551615 6207462 0 0 4096 0 0 0 0 17 1 0 0 0 /proc/10791/statm: 2629 1849 365 984 0 1642 0 Current children cumulated CPU time (s) 0.01 Current children cumulated vsize (KiB) 10516 [startup+0.101422 s] /proc/loadavg: 1.03 1.00 1.00 3/106 10791 /proc/meminfo: memFree=1405440/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=16164 CPUtime=0.1 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 3337 0 0 0 9 1 0 0 18 0 1 0 3680182 16551936 3257 1992294400 4194304 8223781 140733341896352 18446744073709551615 7253477 0 0 4096 0 0 0 0 17 1 0 0 0 /proc/10791/statm: 4041 3257 365 984 0 3054 0 Current children cumulated CPU time (s) 0.1 Current children cumulated vsize (KiB) 16164 [startup+0.300441 s] /proc/loadavg: 1.03 1.00 1.00 3/106 10791 /proc/meminfo: memFree=1405440/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=21080 CPUtime=0.29 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 4583 0 0 0 28 1 0 0 18 0 1 0 3680182 21585920 4503 1992294400 4194304 8223781 140733341896352 18446744073709551615 7253477 0 0 4096 0 0 0 0 17 1 0 0 0 /proc/10791/statm: 5270 4503 365 984 0 4283 0 Current children cumulated CPU time (s) 0.29 Current children cumulated vsize (KiB) 21080 [startup+0.70048 s] /proc/loadavg: 1.03 1.00 1.00 3/106 10791 /proc/meminfo: memFree=1405440/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=28892 CPUtime=0.69 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 6529 0 0 0 67 2 0 0 18 0 1 0 3680182 29585408 6449 1992294400 4194304 8223781 140733341896352 18446744073709551615 7253477 0 0 4096 0 0 0 0 17 1 0 0 0 /proc/10791/statm: 7223 6449 365 984 0 6236 0 Current children cumulated CPU time (s) 0.69 Current children cumulated vsize (KiB) 28892 [startup+1.50156 s] /proc/loadavg: 1.03 1.00 1.00 2/107 10792 /proc/meminfo: memFree=1375176/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=44992 CPUtime=1.5 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 10549 0 0 0 146 4 0 0 19 0 1 0 3680182 46071808 10469 1992294400 4194304 8223781 140733341896352 18446744073709551615 6640021 0 0 4096 0 0 0 0 17 1 0 0 0 /proc/10791/statm: 11248 10469 365 984 0 10261 0 Current children cumulated CPU time (s) 1.5 Current children cumulated vsize (KiB) 44992 [startup+3.10171 s] /proc/loadavg: 1.03 1.00 1.00 2/107 10792 /proc/meminfo: memFree=1352112/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=77532 CPUtime=3.09 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 18664 0 0 0 302 7 0 0 23 0 1 0 3680182 79392768 18584 1992294400 4194304 8223781 140733341896352 18446744073709551615 7216827 0 0 4096 0 0 0 0 17 1 0 0 0 /proc/10791/statm: 19383 18584 365 984 0 18396 0 Current children cumulated CPU time (s) 3.09 Current children cumulated vsize (KiB) 77532 [startup+6.30102 s] /proc/loadavg: 1.10 1.02 1.01 2/107 10792 /proc/meminfo: memFree=1282920/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=143888 CPUtime=6.29 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 35186 0 0 0 615 14 0 0 25 0 1 0 3680182 147341312 35106 1992294400 4194304 8223781 140733341896352 18446744073709551615 7189544 0 0 4096 0 0 0 0 17 1 0 0 0 /proc/10791/statm: 35972 35106 365 984 0 34985 0 Current children cumulated CPU time (s) 6.29 Current children cumulated vsize (KiB) 143888 [startup+12.7016 s] /proc/loadavg: 1.09 1.02 1.00 2/107 10792 /proc/meminfo: memFree=1087744/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=324200 CPUtime=12.69 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 114589 0 0 0 1178 91 0 0 25 0 1 0 3680182 331980800 79574 1992294400 4194304 8223781 140733341896352 18446744073709551615 4223052 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 81050 79574 464 984 0 80063 0 Current children cumulated CPU time (s) 12.69 Current children cumulated vsize (KiB) 324200 [startup+25.5009 s] /proc/loadavg: 1.07 1.01 1.00 2/107 10792 /proc/meminfo: memFree=1052652/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=369856 CPUtime=25.49 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 133199 0 0 0 2447 102 0 0 25 0 1 0 3680182 378732544 88378 1992294400 4194304 8223781 140733341896352 18446744073709551615 6568376 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 92464 88378 536 984 0 91477 0 Current children cumulated CPU time (s) 25.49 Current children cumulated vsize (KiB) 369856 [startup+51.1004 s] /proc/loadavg: 1.05 1.01 1.00 2/107 10794 /proc/meminfo: memFree=1049800/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=375732 CPUtime=51.07 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 258132 0 0 0 4956 151 0 0 25 0 1 0 3680182 384749568 89261 1992294400 4194304 8223781 140733341896352 18446744073709551615 6591967 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 93933 89261 545 984 0 92946 0 Current children cumulated CPU time (s) 51.07 Current children cumulated vsize (KiB) 375732 [startup+102.308 s] /proc/loadavg: 1.02 1.01 1.00 2/107 10794 /proc/meminfo: memFree=1047568/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=375732 CPUtime=102.25 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 284876 0 0 0 10052 173 0 0 25 0 1 0 3680182 384749568 89736 1992294400 4194304 8223781 140733341896352 18446744073709551615 6568478 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 93933 89736 545 984 0 92946 0 Current children cumulated CPU time (s) 102.25 Current children cumulated vsize (KiB) 375732 [startup+162.301 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10796 /proc/meminfo: memFree=1045212/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=375864 CPUtime=162.23 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 648089 0 0 0 15905 318 0 0 25 0 1 0 3680182 384884736 90304 1992294400 4194304 8223781 140733341896352 18446744073709551615 6299574 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 93966 90304 547 984 0 92979 0 Current children cumulated CPU time (s) 162.23 Current children cumulated vsize (KiB) 375864 [startup+222.301 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10798 /proc/meminfo: memFree=1041492/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=380188 CPUtime=222.21 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 817955 0 0 0 21812 409 0 0 25 0 1 0 3680182 389312512 91270 1992294400 4194304 8223781 140733341896352 18446744073709551615 6564721 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95047 91270 570 984 0 94060 0 Current children cumulated CPU time (s) 222.21 Current children cumulated vsize (KiB) 380188 [startup+282.301 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10800 /proc/meminfo: memFree=1040748/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=381728 CPUtime=282.19 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 1588719 0 0 0 27496 723 0 0 25 0 1 0 3680182 390889472 91365 1992294400 4194304 8223781 140733341896352 18446744073709551615 6044346 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95432 91365 570 984 0 94445 0 Current children cumulated CPU time (s) 282.19 Current children cumulated vsize (KiB) 381728 [startup+342.301 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10802 /proc/meminfo: memFree=1040376/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=382048 CPUtime=342.17 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 3545199 0 0 0 32738 1479 0 0 25 0 1 0 3680182 391217152 91445 1992294400 4194304 8223781 140733341896352 18446744073709551615 7257278 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95512 91445 570 984 0 94525 0 Current children cumulated CPU time (s) 342.17 Current children cumulated vsize (KiB) 382048 [startup+402.301 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10802 /proc/meminfo: memFree=1040376/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=381728 CPUtime=402.15 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 5522879 0 0 0 37961 2254 0 0 25 0 1 0 3680182 390889472 91365 1992294400 4194304 8223781 140733341896352 18446744073709551615 6054124 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95432 91365 570 984 0 94445 0 Current children cumulated CPU time (s) 402.15 Current children cumulated vsize (KiB) 381728 [startup+462.301 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10804 /proc/meminfo: memFree=1038640/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=382276 CPUtime=462.13 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 7083973 0 0 0 43353 2860 0 0 25 0 1 0 3680182 391450624 91793 1992294400 4194304 8223781 140733341896352 18446744073709551615 6059666 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95569 91793 570 984 0 94582 0 Current children cumulated CPU time (s) 462.13 Current children cumulated vsize (KiB) 382276 [startup+522.301 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10806 /proc/meminfo: memFree=1038516/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=382792 CPUtime=522.11 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 8327675 0 0 0 48867 3344 0 0 25 0 1 0 3680182 391979008 91944 1992294400 4194304 8223781 140733341896352 18446744073709551615 6300067 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95698 91944 570 984 0 94711 0 Current children cumulated CPU time (s) 522.11 Current children cumulated vsize (KiB) 382792 [startup+582.301 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10808 /proc/meminfo: memFree=1038144/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=382472 CPUtime=582.09 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 10221035 0 0 0 54115 4094 0 0 25 0 1 0 3680182 391651328 91864 1992294400 4194304 8223781 140733341896352 18446744073709551615 6054173 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95618 91864 570 984 0 94631 0 Current children cumulated CPU time (s) 582.09 Current children cumulated vsize (KiB) 382472 [startup+642.301 s] /proc/loadavg: 1.08 1.02 1.01 2/107 10810 /proc/meminfo: memFree=1038144/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=382792 CPUtime=642.08 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 12093355 0 0 0 59405 4803 0 0 25 0 1 0 3680182 391979008 91944 1992294400 4194304 8223781 140733341896352 18446744073709551615 7294506 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95698 91944 570 984 0 94711 0 Current children cumulated CPU time (s) 642.08 Current children cumulated vsize (KiB) 382792 [startup+702.301 s] ################ # More data... # ################ /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 21513354 0 0 0 91783 8413 0 0 25 0 1 0 3680182 392081408 91909 1992294400 4194304 8223781 140733341896352 18446744073709551615 6055425 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95723 91909 570 984 0 94736 0 Current children cumulated CPU time (s) 1001.96 Current children cumulated vsize (KiB) 382892 [startup+1062.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10829 /proc/meminfo: memFree=1037152/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383440 CPUtime=1061.93 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 22006917 0 0 0 97590 8603 0 0 25 0 1 0 3680182 392642560 92037 1992294400 4194304 8223781 140733341896352 18446744073709551615 6568376 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95860 92037 570 984 0 94873 0 Current children cumulated CPU time (s) 1061.93 Current children cumulated vsize (KiB) 383440 [startup+1122.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10831 /proc/meminfo: memFree=1037028/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383264 CPUtime=1121.92 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 24789040 0 0 0 102602 9590 0 0 25 0 1 0 3680182 392462336 91980 1992294400 4194304 8223781 140733341896352 18446744073709551615 6054124 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95816 91980 570 984 0 94829 0 Current children cumulated CPU time (s) 1121.92 Current children cumulated vsize (KiB) 383264 [startup+1182.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10833 /proc/meminfo: memFree=1037648/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383928 CPUtime=1181.9 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 27064901 0 0 0 107801 10389 0 0 25 0 1 0 3680182 393142272 91892 1992294400 4194304 8223781 140733341896352 18446744073709551615 6568401 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95982 91892 570 984 0 94995 0 Current children cumulated CPU time (s) 1181.9 Current children cumulated vsize (KiB) 383928 [startup+1242.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10835 /proc/meminfo: memFree=1040872/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383256 CPUtime=1241.88 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 28901953 0 0 0 113077 11111 0 0 25 0 1 0 3680182 392454144 91063 1992294400 4194304 8223781 140733341896352 18446744073709551615 6048066 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95891 91063 570 984 0 94904 0 Current children cumulated CPU time (s) 1241.88 Current children cumulated vsize (KiB) 383256 [startup+1302.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10835 /proc/meminfo: memFree=1040872/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383564 CPUtime=1301.88 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 30834884 0 0 0 118314 11874 0 0 25 0 1 0 3680182 392769536 91140 1992294400 4194304 8223781 140733341896352 18446744073709551615 7294506 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95891 91140 570 984 0 94904 0 Current children cumulated CPU time (s) 1301.88 Current children cumulated vsize (KiB) 383564 [startup+1362.3 s] /proc/loadavg: 1.06 1.02 1.00 2/107 10837 /proc/meminfo: memFree=1036780/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383680 CPUtime=1361.85 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 31972067 0 0 0 123873 12312 0 0 25 0 1 0 3680182 392888320 92133 1992294400 4194304 8223781 140733341896352 18446744073709551615 6612661 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95920 92133 570 984 0 94933 0 Current children cumulated CPU time (s) 1361.85 Current children cumulated vsize (KiB) 383680 [startup+1422.31 s] /proc/loadavg: 1.02 1.01 1.00 2/107 10839 /proc/meminfo: memFree=1036780/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383816 CPUtime=1421.84 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 34430440 0 0 0 129008 13176 0 0 25 0 1 0 3680182 393027584 92146 1992294400 4194304 8223781 140733341896352 18446744073709551615 7253477 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95954 92158 570 984 0 94967 0 Current children cumulated CPU time (s) 1421.84 Current children cumulated vsize (KiB) 383816 [startup+1482.3 s] /proc/loadavg: 1.01 1.00 1.00 2/107 10841 /proc/meminfo: memFree=1037524/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383824 CPUtime=1481.81 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 36498634 0 0 0 134263 13918 0 0 25 0 1 0 3680182 393035776 91954 1992294400 4194304 8223781 140733341896352 18446744073709551615 7253477 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95956 91965 570 984 0 94969 0 Current children cumulated CPU time (s) 1481.81 Current children cumulated vsize (KiB) 383824 [startup+1542.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10843 /proc/meminfo: memFree=1036656/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383784 CPUtime=1541.8 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 36818050 0 0 0 140125 14055 0 0 25 0 1 0 3680182 392994816 92224 1992294400 4194304 8223781 140733341896352 18446744073709551615 6568021 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95946 92224 570 984 0 94959 0 Current children cumulated CPU time (s) 1541.8 Current children cumulated vsize (KiB) 383784 [startup+1602.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10843 /proc/meminfo: memFree=1038392/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=383740 CPUtime=1601.78 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 37749919 0 0 0 145766 14412 0 0 25 0 1 0 3680182 392949760 91796 1992294400 4194304 8223781 140733341896352 18446744073709551615 6569994 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 95935 91796 570 984 0 94948 0 Current children cumulated CPU time (s) 1601.78 Current children cumulated vsize (KiB) 383740 [startup+1662.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10845 /proc/meminfo: memFree=1036284/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=384120 CPUtime=1661.76 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 37781965 0 0 0 151740 14436 0 0 25 0 1 0 3680182 393338880 92334 1992294400 4194304 8223781 140733341896352 18446744073709551615 6563044 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 96030 92334 570 984 0 95043 0 Current children cumulated CPU time (s) 1661.76 Current children cumulated vsize (KiB) 384120 [startup+1722.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10847 /proc/meminfo: memFree=1036036/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=384756 CPUtime=1721.75 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 37802920 0 0 0 157722 14453 0 0 25 0 1 0 3680182 393990144 92477 1992294400 4194304 8223781 140733341896352 18446744073709551615 6569884 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 96189 92477 581 984 0 95202 0 Current children cumulated CPU time (s) 1721.75 Current children cumulated vsize (KiB) 384756 [startup+1782.3 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10849 /proc/meminfo: memFree=1035168/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=385676 CPUtime=1781.74 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 37825768 0 0 0 163705 14469 0 0 25 0 1 0 3680182 394932224 92550 1992294400 4194304 8223781 140733341896352 18446744073709551615 6562863 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 96419 92550 576 984 0 95432 0 Current children cumulated CPU time (s) 1781.74 Current children cumulated vsize (KiB) 385676 Maximum CPU time exceeded: sending SIGTERM then SIGKILL [startup+1800.6 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10849 /proc/meminfo: memFree=1039508/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=385016 CPUtime=1800.04 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 37850823 0 0 0 165520 14484 0 0 25 0 1 0 3680182 394256384 91455 1992294400 4194304 8223781 140733341896352 18446744073709551615 7304922 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 96254 91455 580 984 0 95267 0 Current children cumulated CPU time (s) 1800.04 Current children cumulated vsize (KiB) 385016 Sending SIGTERM to process tree (bottom up) Sleeping 2 seconds Sending SIGKILL to process tree (bottom up) Sending SIGKILL to -10791 Solver just ended. Dumping a history of the last processes samples [startup+1801.4 s] /proc/loadavg: 1.00 1.00 1.00 2/107 10849 /proc/meminfo: memFree=1039508/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=385016 CPUtime=1800.83 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 37850961 0 0 0 165598 14485 0 0 25 0 1 0 3680182 394256384 91593 1992294400 4194304 8223781 140733341896352 18446744073709551615 7253477 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 96254 91593 580 984 0 95267 0 Current children cumulated CPU time (s) 1800.83 Current children cumulated vsize (KiB) 385016 [startup+1802.2 s] /proc/loadavg: 1.00 1.00 1.00 2/108 10850 /proc/meminfo: memFree=1038632/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=385016 CPUtime=1801.62 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 37852662 0 0 0 165677 14485 0 0 25 0 1 0 3680182 394256384 91840 1992294400 4194304 8223781 140733341896352 18446744073709551615 6569873 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 96254 91840 580 984 0 95267 0 Current children cumulated CPU time (s) 1801.62 Current children cumulated vsize (KiB) 385016 [startup+1802.6 s] /proc/loadavg: 1.00 1.00 1.00 2/108 10850 /proc/meminfo: memFree=1038632/2059040 swapFree=4192956/4192956 [pid=10791] ppid=10789 vsize=385016 CPUtime=1802.02 /proc/10791/stat : 10791 (pbscip.linux.x8) R 10789 10791 10496 0 -1 4202496 37852671 0 0 0 165717 14485 0 0 25 0 1 0 3680182 394256384 91849 1992294400 4194304 8223781 140733341896352 18446744073709551615 6564834 0 0 4096 16384 0 0 0 17 1 0 0 0 /proc/10791/statm: 96254 91849 580 984 0 95267 0 Current children cumulated CPU time (s) 1802.02 Current children cumulated vsize (KiB) 385016 Child ended because it received signal 9 (SIGKILL) Real time (s): 1802.65 CPU time (s): 1802.09 CPU user time (s): 1657.2 CPU system time (s): 144.894 CPU usage (%): 99.9687 Max. virtual memory (cumulated for all children) (KiB): 438756 getrusage(RUSAGE_CHILDREN,...) data: user time used= 1657.2 system time used= 144.894 maximum resident set size= 0 integral shared memory size= 0 integral unshared data size= 0 integral unshared stack size= 0 page reclaims= 37852671 page faults= 0 swaps= 0 block input operations= 0 block output operations= 0 messages sent= 0 messages received= 0 signals received= 0 voluntary context switches= 2 involuntary context switches= 2784 runsolver used 3.04654 second user time and 8.44372 second system time The end
Begin job on node036 at 2010-06-15 19:44:33 IDJOB=2666926 IDBENCH=2957 IDSOLVER=1169 FILE ID=node036/2666926-1276623872 PBS_JOBID= 11172337 Free space on /tmp= 62512 MiB SOLVER NAME= SCIPspx SCIP 1.2.1.2 with SoPlex 1.4.2 (CVS Version 30.5.2010) as LP solver BENCH NAME= PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-unif-100_100.00.opb COMMAND LINE= HOME/pbscip.linux.x86_64.gnu.opt.spx -f BENCHNAME -t TIMEOUT -m MEMLIMIT RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-2666926-1276623872/watcher-2666926-1276623872 -o /tmp/evaluation-result-2666926-1276623872/solver-2666926-1276623872 -C 1800 -W 2000 -M 1800 HOME/pbscip.linux.x86_64.gnu.opt.spx -f HOME/instance-2666926-1276623872.opb -t 1800 -m 1800 TIME LIMIT= 1800 seconds MEMORY LIMIT= 1800 MiB MAX NB THREAD= 0 MD5SUM BENCH= 9e8d546df5cfe52cfb5a29d8ae802e41 RANDOM SEED=451043491 node036.alineos.net Linux 2.6.18-164.el5 #1 SMP Thu Sep 3 03:28:30 EDT 2009 /proc/cpuinfo: processor : 0 vendor_id : GenuineIntel cpu family : 15 model : 4 model name : Intel(R) Xeon(TM) CPU 3.00GHz stepping : 3 cpu MHz : 3000.251 cache size : 2048 KB physical id : 0 siblings : 1 core id : 0 cpu cores : 1 apicid : 0 fpu : yes fpu_exception : yes cpuid level : 5 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm constant_tsc pni monitor ds_cpl cid cx16 xtpr bogomips : 6000.50 clflush size : 64 cache_alignment : 128 address sizes : 36 bits physical, 48 bits virtual power management: processor : 1 vendor_id : GenuineIntel cpu family : 15 model : 4 model name : Intel(R) Xeon(TM) CPU 3.00GHz stepping : 3 cpu MHz : 3000.251 cache size : 2048 KB physical id : 3 siblings : 1 core id : 0 cpu cores : 1 apicid : 6 fpu : yes fpu_exception : yes cpuid level : 5 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm constant_tsc pni monitor ds_cpl cid cx16 xtpr bogomips : 5599.45 clflush size : 64 cache_alignment : 128 address sizes : 36 bits physical, 48 bits virtual power management: /proc/meminfo: MemTotal: 2059040 kB MemFree: 1405844 kB Buffers: 81300 kB Cached: 430744 kB SwapCached: 0 kB Active: 215292 kB Inactive: 356280 kB HighTotal: 0 kB HighFree: 0 kB LowTotal: 2059040 kB LowFree: 1405844 kB SwapTotal: 4192956 kB SwapFree: 4192956 kB Dirty: 17248 kB Writeback: 0 kB AnonPages: 59368 kB Mapped: 15360 kB Slab: 59784 kB PageTables: 3984 kB NFS_Unstable: 0 kB Bounce: 0 kB CommitLimit: 5222476 kB Committed_AS: 180504 kB VmallocTotal: 34359738367 kB VmallocUsed: 264948 kB VmallocChunk: 34359471699 kB HugePages_Total: 0 HugePages_Free: 0 HugePages_Rsvd: 0 Hugepagesize: 2048 kB Free space on /tmp at the end= 62508 MiB End job on node036 at 2010-06-15 20:14:36