Trace number 2665687

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds. The first timestamp (if present) is estimated CPU time. The last timestamp is wall clock time.

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerobjective functionCPU timeWall clock time
SCIPclp SCIP 1.2.1.2 with Clp 1.11.1 (Release Version) as LP solver? (TO) 1802.15 1802.71

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.11.opb
MD5SUM5f844d3fbd9d157e56bab6c09ee5f179
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkSAT
Best value of the objective obtained on this benchmark38
Best CPU time to get the best result obtained on this benchmark1800.48
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 38
Optimality of the best value was proved YES
Number of variables21675
Total number of constraints1210400
Number of constraints which are clauses1206830
Number of constraints which are cardinality constraints (but not clauses)3570
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint170
Number of terms in the objective function 170
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 170
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 168
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 338
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data 

0.00/0.00	c SCIP version 1.2.1.2 [precision: 8 byte] [memory: block] [mode: optimized] [LP solver: Clp 1.11.1] [Expressions interpreter: NONE]
0.00/0.00	c Copyright (c) 2002-2010 Konrad-Zuse-Zentrum fuer Informationstechnik Berlin (ZIB)
0.00/0.00	c 
0.00/0.00	c user parameter file <scip.set> not found - using default parameters
0.00/0.00	c reading problem <HOME/instance-2665687-1276622681.opb>
22.08/22.16	c original problem has 21675 variables (21675 bin, 0 int, 0 impl, 0 cont) and 1210400 constraints
22.08/22.16	c problem read
22.08/22.17	c presolving settings loaded
25.48/25.58	c presolving:
36.98/37.07	c (round 1) 10229 del vars, 1090739 del conss, 9827 chg bounds, 162 chg sides, 324 chg coeffs, 0 upgd conss, 2971827 impls, 0 clqs
37.18/37.28	c (round 2) 10233 del vars, 1099536 del conss, 9827 chg bounds, 162 chg sides, 324 chg coeffs, 0 upgd conss, 2971827 impls, 0 clqs
38.78/38.81	c (round 3) 10233 del vars, 1099536 del conss, 9827 chg bounds, 162 chg sides, 324 chg coeffs, 110864 upgd conss, 2971827 impls, 0 clqs
40.08/40.10	c    (15.6s) probing: 161/11442 (1.4%) - 0 fixings, 0 aggregations, 6 implications, 0 bound changes
40.08/40.10	c    (15.6s) probing aborted: 100/100 successive totally useless probings
40.08/40.10	c presolving (4 rounds):
40.08/40.10	c  10233 deleted vars, 1099536 deleted constraints, 9827 tightened bounds, 0 added holes, 162 changed sides, 324 changed coefficients
40.08/40.10	c  2971839 implications, 0 cliques
40.08/40.10	c presolved problem has 11442 variables (11442 bin, 0 int, 0 impl, 0 cont) and 110864 constraints
40.08/40.10	c  110864 constraints of type <logicor>
40.08/40.10	c transformed objective value is always integral (scale: 1)
40.08/40.10	c Presolving Time: 13.05
40.08/40.10	c - non default parameters ----------------------------------------------------------------------
40.08/40.10	c # SCIP version 1.2.1.2
40.08/40.10	c 
40.08/40.10	c # maximal number of intermediate conflict constraints generated in conflict graph (-1: use every intermediate constraint)
40.08/40.10	c # [type: int, range: [-1,2147483647], default: -1]
40.08/40.10	c conflict/interconss = 0
40.08/40.10	c 
40.08/40.10	c # should binary conflicts be preferred?
40.08/40.10	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
40.08/40.10	c conflict/preferbinary = TRUE
40.08/40.10	c 
40.08/40.10	c # maximum age an unnecessary constraint can reach before it is deleted (0: dynamic, -1: keep all constraints)
40.08/40.10	c # [type: int, range: [-1,2147483647], default: 0]
40.08/40.10	c constraints/agelimit = 1
40.08/40.10	c 
40.08/40.10	c # should enforcement of pseudo solution be disabled?
40.08/40.10	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
40.08/40.10	c constraints/disableenfops = TRUE
40.08/40.10	c 
40.08/40.10	c # frequency for displaying node information lines
40.08/40.10	c # [type: int, range: [-1,2147483647], default: 100]
40.08/40.10	c display/freq = 10000
40.08/40.10	c 
40.08/40.10	c # maximal time in seconds to run
40.08/40.10	c # [type: real, range: [0,1.79769313486232e+308], default: 1e+20]
40.08/40.10	c limits/time = 1777.85
40.08/40.10	c 
40.08/40.10	c # maximal memory usage in MB; reported memory usage is lower than real memory usage!
40.08/40.10	c # [type: real, range: [0,1.79769313486232e+308], default: 1e+20]
40.08/40.10	c limits/memory = 1620
40.08/40.10	c 
40.08/40.10	c # frequency for solving LP at the nodes (-1: never; 0: only root LP)
40.08/40.10	c # [type: int, range: [-1,2147483647], default: 1]
40.08/40.10	c lp/solvefreq = 0
40.08/40.10	c 
40.08/40.10	c # LP pricing strategy ('l'pi default, 'a'uto, 'f'ull pricing, 'p'artial, 's'teepest edge pricing, 'q'uickstart steepest edge pricing, 'd'evex pricing)
40.08/40.10	c # [type: char, range: {lafpsqd}, default: l]
40.08/40.10	c lp/pricing = a
40.08/40.10	c 
40.08/40.10	c # should presolving try to simplify inequalities
40.08/40.10	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
40.08/40.10	c constraints/linear/simplifyinequalities = TRUE
40.08/40.10	c 
40.08/40.10	c # should presolving try to simplify knapsacks
40.08/40.10	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
40.08/40.10	c constraints/knapsack/simplifyinequalities = TRUE
40.08/40.10	c 
40.08/40.10	c # priority of node selection rule <dfs> in standard mode
40.08/40.10	c # [type: int, range: [-536870912,536870911], default: 0]
40.08/40.10	c nodeselection/dfs/stdpriority = 1000000
40.08/40.10	c 
40.08/40.10	c -----------------------------------------------------------------------------------------------
40.08/40.10	c start solving
40.08/40.12	c 
40.08/40.15	o 166
40.08/40.15	c  time | node  | left  |LP iter|LP it/n| mem |mdpt |frac |vars |cons |cols |rows |cuts |confs|strbr|  dualbound   | primalbound  |  gap   
40.08/40.15	c t15.6s|     1 |     0 |     0 |     - | 660M|   0 |   - |  11k| 110k|   0 |   0 |   0 |   0 |   0 |      --      | 1.660000e+02 |    Inf 
122.96/123.02	c  97.7s|     1 |     0 | 20169 |     - | 709M|   0 |  11k|  11k| 110k|  11k| 110k|   0 |   0 |   0 | 1.000000e+01 | 1.660000e+02 |1560.00%
858.52/858.86	c   830s|     1 |     0 | 56913 |     - | 713M|   0 |9461 |  11k| 110k|  11k| 110k|  24 |   0 |   0 | 1.416667e+01 | 1.660000e+02 |1071.76%
1800.05/1800.61	c pressed CTRL-C 1 times (5 times for forcing termination)

Verifier Data 

ERROR: no interpretation found !

Watcher Data 

runsolver version 3.2.9 (svn:492) (c) roussel@cril.univ-artois.fr

command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-2665687-1276622681/watcher-2665687-1276622681 -o /tmp/evaluation-result-2665687-1276622681/solver-2665687-1276622681 -C 1800 -W 2000 -M 1800 HOME/pbscip.linux.x86_64.gnu.opt.clp -f HOME/instance-2665687-1276622681.opb -t 1800 -m 1800 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 2000 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.92 0.98 0.99 3/106 10961
/proc/meminfo: memFree=1707492/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=9288 CPUtime=0
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1084 0 0 0 0 0 0 0 20 0 1 0 3560327 9510912 1005 1992294400 4194304 9819077 140735069033696 18446744073709551615 8675093 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 2322 1014 371 1374 0 943 0

[startup+0.076818 s]
/proc/loadavg: 0.92 0.98 0.99 3/106 10961
/proc/meminfo: memFree=1707492/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=17112 CPUtime=0.07
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 3216 0 0 0 6 1 0 0 20 0 1 0 3560327 17522688 3137 1992294400 4194304 9819077 140735069033696 18446744073709551615 8675093 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 4278 3137 388 1374 0 2899 0
Current children cumulated CPU time (s) 0.07
Current children cumulated vsize (KiB) 17112

[startup+0.100819 s]
/proc/loadavg: 0.92 0.98 0.99 3/106 10961
/proc/meminfo: memFree=1707492/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=19160 CPUtime=0.09
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 3737 0 0 0 8 1 0 0 20 0 1 0 3560327 19619840 3658 1992294400 4194304 9819077 140735069033696 18446744073709551615 5654140 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 4790 3658 388 1374 0 3411 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 19160

[startup+0.300841 s]
/proc/loadavg: 0.92 0.98 0.99 3/106 10961
/proc/meminfo: memFree=1707492/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=23516 CPUtime=0.29
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 4818 0 0 0 28 1 0 0 20 0 1 0 3560327 24080384 4739 1992294400 4194304 9819077 140735069033696 18446744073709551615 8675093 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 5879 4739 388 1374 0 4500 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 23516

[startup+0.700884 s]
/proc/loadavg: 0.92 0.98 0.99 3/106 10961
/proc/meminfo: memFree=1707492/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=31268 CPUtime=0.69
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 6765 0 0 0 67 2 0 0 20 0 1 0 3560327 32018432 6686 1992294400 4194304 9819077 140735069033696 18446744073709551615 8675093 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 7817 6686 388 1374 0 6438 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 31268

[startup+1.50097 s]
/proc/loadavg: 0.92 0.98 0.99 2/107 10962
/proc/meminfo: memFree=1674500/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=46652 CPUtime=1.49
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 10570 0 0 0 145 4 0 0 22 0 1 0 3560327 47771648 10491 1992294400 4194304 9819077 140735069033696 18446744073709551615 5902349 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 11663 10491 388 1374 0 10284 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 46652

[startup+3.10114 s]
/proc/loadavg: 1.01 1.00 1.00 2/107 10962
/proc/meminfo: memFree=1653544/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=78112 CPUtime=3.09
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 18392 0 0 0 302 7 0 0 25 0 1 0 3560327 79986688 18313 1992294400 4194304 9819077 140735069033696 18446744073709551615 8675093 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 19528 18313 388 1374 0 18149 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 78112

[startup+6.30148 s]
/proc/loadavg: 1.01 1.00 1.00 2/107 10962
/proc/meminfo: memFree=1590180/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=141988 CPUtime=6.29
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 34327 0 0 0 615 14 0 0 25 0 1 0 3560327 145395712 34248 1992294400 4194304 9819077 140735069033696 18446744073709551615 8611012 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 35497 34248 388 1374 0 34118 0
Current children cumulated CPU time (s) 6.29
Current children cumulated vsize (KiB) 141988

[startup+12.7012 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10962
/proc/meminfo: memFree=1459484/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=268708 CPUtime=12.68
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 66095 0 0 0 1241 27 0 0 25 0 1 0 3560327 275156992 66016 1992294400 4194304 9819077 140735069033696 18446744073709551615 8675093 0 0 4096 0 0 0 0 17 1 0 0 0
/proc/10961/statm: 67177 66016 388 1374 0 65798 0
Current children cumulated CPU time (s) 12.68
Current children cumulated vsize (KiB) 268708

[startup+25.5005 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10964
/proc/meminfo: memFree=527624/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1224716 CPUtime=25.48
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 322586 0 0 0 2428 120 0 0 25 0 1 0 3560327 1254109184 301391 1992294400 4194304 9819077 140735069033696 18446744073709551615 4561370 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 306179 301391 449 1374 0 304800 0
Current children cumulated CPU time (s) 25.48
Current children cumulated vsize (KiB) 1224716

[startup+51.1002 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10964
/proc/meminfo: memFree=757148/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1055232 CPUtime=51.08
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 445403 0 0 0 4790 318 0 0 25 0 1 0 3560327 1080557568 237745 1992294400 4194304 9819077 140735069033696 18446744073709551615 7299232 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 263808 237745 634 1374 0 262429 0
Current children cumulated CPU time (s) 51.08
Current children cumulated vsize (KiB) 1055232

[startup+102.309 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10966
/proc/meminfo: memFree=756528/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1057760 CPUtime=102.27
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 504526 0 0 0 9879 348 0 0 25 0 1 0 3560327 1083146240 237841 1992294400 4194304 9819077 140735069033696 18446744073709551615 7291617 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 264440 237841 636 1374 0 263061 0
Current children cumulated CPU time (s) 102.27
Current children cumulated vsize (KiB) 1057760

[startup+162.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10966
/proc/meminfo: memFree=758512/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1059000 CPUtime=162.25
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 531819 0 0 0 15854 371 0 0 25 0 1 0 3560327 1084416000 237858 1992294400 4194304 9819077 140735069033696 18446744073709551615 6060064 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 264750 237858 652 1374 0 263371 0
Current children cumulated CPU time (s) 162.25
Current children cumulated vsize (KiB) 1059000

[startup+222.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10968
/proc/meminfo: memFree=737432/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1080884 CPUtime=222.22
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 557783 0 0 0 21749 473 0 0 25 0 1 0 3560327 1106825216 242695 1992294400 4194304 9819077 140735069033696 18446744073709551615 7480831 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270221 242695 677 1374 0 268842 0
Current children cumulated CPU time (s) 222.22
Current children cumulated vsize (KiB) 1080884

[startup+282.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10970
/proc/meminfo: memFree=727512/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1080884 CPUtime=282.21
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 596430 0 0 0 27725 496 0 0 25 0 1 0 3560327 1106825216 242481 1992294400 4194304 9819077 140735069033696 18446744073709551615 7291116 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270221 242481 677 1374 0 268842 0
Current children cumulated CPU time (s) 282.21
Current children cumulated vsize (KiB) 1080884

[startup+342.301 s]
/proc/loadavg: 1.03 1.01 1.00 2/107 10972
/proc/meminfo: memFree=727512/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1080884 CPUtime=342.18
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 630536 0 0 0 33702 516 0 0 25 0 1 0 3560327 1106825216 245193 1992294400 4194304 9819077 140735069033696 18446744073709551615 6191175 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270221 245193 677 1374 0 268842 0
Current children cumulated CPU time (s) 342.18
Current children cumulated vsize (KiB) 1080884

[startup+402.301 s]
/proc/loadavg: 1.01 1.01 1.00 2/107 10974
/proc/meminfo: memFree=728256/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1080860 CPUtime=402.17
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 669995 0 0 0 39679 538 0 0 25 0 1 0 3560327 1106800640 245048 1992294400 4194304 9819077 140735069033696 18446744073709551615 7290952 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270215 245048 677 1374 0 268836 0
Current children cumulated CPU time (s) 402.17
Current children cumulated vsize (KiB) 1080860

[startup+462.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10977
/proc/meminfo: memFree=734084/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1080884 CPUtime=462.14
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 708387 0 0 0 45655 559 0 0 25 0 1 0 3560327 1106825216 243491 1992294400 4194304 9819077 140735069033696 18446744073709551615 7291597 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270221 243491 677 1374 0 268842 0
Current children cumulated CPU time (s) 462.14
Current children cumulated vsize (KiB) 1080884

[startup+522.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10979
/proc/meminfo: memFree=726644/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1080884 CPUtime=522.13
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 742283 0 0 0 51636 577 0 0 25 0 1 0 3560327 1106825216 245313 1992294400 4194304 9819077 140735069033696 18446744073709551615 7324416 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270221 245313 677 1374 0 268842 0
Current children cumulated CPU time (s) 522.13
Current children cumulated vsize (KiB) 1080884

[startup+582.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10981
/proc/meminfo: memFree=735324/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1080820 CPUtime=582.11
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 780454 0 0 0 57611 600 0 0 25 0 1 0 3560327 1106759680 243403 1992294400 4194304 9819077 140735069033696 18446744073709551615 6191141 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270205 243403 677 1374 0 268826 0
Current children cumulated CPU time (s) 582.11
Current children cumulated vsize (KiB) 1080820

[startup+642.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10983
/proc/meminfo: memFree=731356/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1080796 CPUtime=642.09
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 813457 0 0 0 63590 619 0 0 25 0 1 0 3560327 1106735104 244104 1992294400 4194304 9819077 140735069033696 18446744073709551615 7309084 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270199 244104 677 1374 0 268820 0
Current children cumulated CPU time (s) 642.09
Current children cumulated vsize (KiB) 1080796

[startup+702.301 s]

################
# More data... #
################

/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1079182 0 0 0 105427 769 0 0 25 0 1 0 3560327 1107210240 245102 1992294400 4194304 9819077 140735069033696 18446744073709551615 7290952 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270315 245102 676 1374 0 268936 0
Current children cumulated CPU time (s) 1061.96
Current children cumulated vsize (KiB) 1081260

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10995
/proc/meminfo: memFree=726272/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081288 CPUtime=1121.93
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1127446 0 0 0 111398 795 0 0 25 0 1 0 3560327 1107238912 245396 1992294400 4194304 9819077 140735069033696 18446744073709551615 7290944 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270322 245396 676 1374 0 268943 0
Current children cumulated CPU time (s) 1121.93
Current children cumulated vsize (KiB) 1081288

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10997
/proc/meminfo: memFree=726396/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081288 CPUtime=1181.91
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1176265 0 0 0 117369 822 0 0 25 0 1 0 3560327 1107238912 245413 1992294400 4194304 9819077 140735069033696 18446744073709551615 7292017 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270322 245413 676 1374 0 268943 0
Current children cumulated CPU time (s) 1181.91
Current children cumulated vsize (KiB) 1081288

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 10999
/proc/meminfo: memFree=725776/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081320 CPUtime=1241.89
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1225286 0 0 0 123342 847 0 0 25 0 1 0 3560327 1107271680 245491 1992294400 4194304 9819077 140735069033696 18446744073709551615 6198333 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270330 245491 676 1374 0 268951 0
Current children cumulated CPU time (s) 1241.89
Current children cumulated vsize (KiB) 1081320

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11001
/proc/meminfo: memFree=726272/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081324 CPUtime=1301.89
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1274060 0 0 0 129316 873 0 0 25 0 1 0 3560327 1107275776 245323 1992294400 4194304 9819077 140735069033696 18446744073709551615 7290967 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270331 245323 676 1374 0 268952 0
Current children cumulated CPU time (s) 1301.89
Current children cumulated vsize (KiB) 1081324

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11001
/proc/meminfo: memFree=726024/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081348 CPUtime=1361.86
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1322908 0 0 0 135288 898 0 0 25 0 1 0 3560327 1107300352 245418 1992294400 4194304 9819077 140735069033696 18446744073709551615 6198362 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270337 245418 676 1374 0 268958 0
Current children cumulated CPU time (s) 1361.86
Current children cumulated vsize (KiB) 1081348

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11003
/proc/meminfo: memFree=734704/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081384 CPUtime=1421.85
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1370133 0 0 0 141263 922 0 0 25 0 1 0 3560327 1107337216 243262 1992294400 4194304 9819077 140735069033696 18446744073709551615 7293505 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270346 243262 676 1374 0 268967 0
Current children cumulated CPU time (s) 1421.85
Current children cumulated vsize (KiB) 1081384

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11005
/proc/meminfo: memFree=725404/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081412 CPUtime=1481.82
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1413386 0 0 0 147238 944 0 0 25 0 1 0 3560327 1107365888 245570 1992294400 4194304 9819077 140735069033696 18446744073709551615 7312726 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270353 245570 676 1374 0 268974 0
Current children cumulated CPU time (s) 1481.82
Current children cumulated vsize (KiB) 1081412

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11007
/proc/meminfo: memFree=735820/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081412 CPUtime=1541.81
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1460070 0 0 0 153212 969 0 0 25 0 1 0 3560327 1107365888 242989 1992294400 4194304 9819077 140735069033696 18446744073709551615 6192320 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270353 242989 676 1374 0 268974 0
Current children cumulated CPU time (s) 1541.81
Current children cumulated vsize (KiB) 1081412

[startup+1602.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11009
/proc/meminfo: memFree=740656/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081412 CPUtime=1601.8
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1500716 0 0 0 159188 992 0 0 25 0 1 0 3560327 1107365888 242790 1992294400 4194304 9819077 140735069033696 18446744073709551615 6656908 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270353 242790 676 1374 0 268974 0
Current children cumulated CPU time (s) 1601.8
Current children cumulated vsize (KiB) 1081412

[startup+1662.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11009
/proc/meminfo: memFree=726644/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081412 CPUtime=1661.78
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1535983 0 0 0 165165 1013 0 0 25 0 1 0 3560327 1107365888 245204 1992294400 4194304 9819077 140735069033696 18446744073709551615 7290967 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270353 245204 676 1374 0 268974 0
Current children cumulated CPU time (s) 1661.78
Current children cumulated vsize (KiB) 1081412

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11011
/proc/meminfo: memFree=725776/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081412 CPUtime=1721.76
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1569058 0 0 0 171147 1029 0 0 25 0 1 0 3560327 1107365888 245456 1992294400 4194304 9819077 140735069033696 18446744073709551615 6198376 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270353 245456 676 1374 0 268974 0
Current children cumulated CPU time (s) 1721.76
Current children cumulated vsize (KiB) 1081412

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/107 11013
/proc/meminfo: memFree=725404/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081412 CPUtime=1781.74
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1601768 0 0 0 177126 1048 0 0 25 0 1 0 3560327 1107365888 245451 1992294400 4194304 9819077 140735069033696 18446744073709551615 7296045 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270353 245451 676 1374 0 268974 0
Current children cumulated CPU time (s) 1781.74
Current children cumulated vsize (KiB) 1081412



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.6 s]
/proc/loadavg: 1.00 1.00 1.00 3/107 11013
/proc/meminfo: memFree=735572/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081388 CPUtime=1800.05
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1615368 0 0 0 178950 1055 0 0 25 0 1 0 3560327 1107341312 242895 1992294400 4194304 9819077 140735069033696 18446744073709551615 6198409 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270347 242895 676 1374 0 268968 0
Current children cumulated CPU time (s) 1800.05
Current children cumulated vsize (KiB) 1081388

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Sending SIGKILL to process tree (bottom up)

Sending SIGKILL to -10961

Solver just ended. Dumping a history of the last processes samples

[startup+1801.4 s]
/proc/loadavg: 1.00 1.00 1.00 3/107 11013
/proc/meminfo: memFree=735572/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081388 CPUtime=1800.83
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1615643 0 0 0 179028 1055 0 0 25 0 1 0 3560327 1107341312 243170 1992294400 4194304 9819077 140735069033696 18446744073709551615 6198704 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270347 243170 676 1374 0 268968 0
Current children cumulated CPU time (s) 1800.83
Current children cumulated vsize (KiB) 1081388

[startup+1802.2 s]
/proc/loadavg: 1.00 1.00 1.00 2/108 11014
/proc/meminfo: memFree=733952/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081388 CPUtime=1801.63
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1616027 0 0 0 179108 1055 0 0 25 0 1 0 3560327 1107341312 243554 1992294400 4194304 9819077 140735069033696 18446744073709551615 6191175 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270347 243554 676 1374 0 268968 0
Current children cumulated CPU time (s) 1801.63
Current children cumulated vsize (KiB) 1081388

[startup+1802.6 s]
/proc/loadavg: 1.00 1.00 1.00 2/108 11014
/proc/meminfo: memFree=733952/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=1081388 CPUtime=1802.03
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4202496 1616256 0 0 0 179148 1055 0 0 25 0 1 0 3560327 1107341312 243783 1992294400 4194304 9819077 140735069033696 18446744073709551615 7291102 0 0 4096 16384 0 0 0 17 1 0 0 0
/proc/10961/statm: 270347 243783 676 1374 0 268968 0
Current children cumulated CPU time (s) 1802.03
Current children cumulated vsize (KiB) 1081388

[startup+1802.7 s]
/proc/loadavg: 1.00 1.00 1.00 2/108 11014
/proc/meminfo: memFree=733952/2059040 swapFree=4192956/4192956
[pid=10961] ppid=10959 vsize=0 CPUtime=1802.14
/proc/10961/stat : 10961 (pbscip.linux.x8) R 10959 10961 10498 0 -1 4203524 1616270 0 0 0 179150 1064 0 0 25 0 1 0 3560327 0 0 1992294400 0 0 0 0 0 0 0 4096 16384 18446744073709551615 0 0 17 1 0 0 0
/proc/10961/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 1802.14
Current children cumulated vsize (KiB) 0

Child ended because it received signal 9 (SIGKILL)
Real time (s): 1802.71
CPU time (s): 1802.15
CPU user time (s): 1791.5
CPU system time (s): 10.6514
CPU usage (%): 99.9691
Max. virtual memory (cumulated for all children) (KiB): 1307700

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1791.5
system time used= 10.6514
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 1616270
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 3
involuntary context switches= 3447

runsolver used 3.04954 second user time and 8.45271 second system time

The end

Launcher Data 

Begin job on node047 at 2010-06-15 19:24:43
IDJOB=2665687
IDBENCH=2952
IDSOLVER=1168
FILE ID=node047/2665687-1276622681
PBS_JOBID= 11172321
Free space on /tmp= 62500 MiB

SOLVER NAME= SCIPclp SCIP 1.2.1.2 with Clp 1.11.1 (Release Version) as LP solver
BENCH NAME= PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.11.opb
COMMAND LINE= HOME/pbscip.linux.x86_64.gnu.opt.clp -f BENCHNAME -t TIMEOUT -m MEMLIMIT
RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-2665687-1276622681/watcher-2665687-1276622681 -o /tmp/evaluation-result-2665687-1276622681/solver-2665687-1276622681 -C 1800 -W 2000 -M 1800  HOME/pbscip.linux.x86_64.gnu.opt.clp -f HOME/instance-2665687-1276622681.opb -t 1800 -m 1800

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB
MAX NB THREAD= 0

MD5SUM BENCH= 5f844d3fbd9d157e56bab6c09ee5f179
RANDOM SEED=589526602

node047.alineos.net Linux 2.6.18-164.el5 #1 SMP Thu Sep 3 03:28:30 EDT 2009

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.244
cache size	: 2048 KB
physical id	: 0
siblings	: 1
core id		: 0
cpu cores	: 1
apicid		: 0
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm constant_tsc pni monitor ds_cpl cid cx16 xtpr
bogomips	: 6000.48
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.244
cache size	: 2048 KB
physical id	: 3
siblings	: 1
core id		: 0
cpu cores	: 1
apicid		: 6
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm constant_tsc pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5599.44
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2059040 kB
MemFree:       1708020 kB
Buffers:         41108 kB
Cached:         183920 kB
SwapCached:          0 kB
Active:         165104 kB
Inactive:       119212 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2059040 kB
LowFree:       1708020 kB
SwapTotal:     4192956 kB
SwapFree:      4192956 kB
Dirty:           49168 kB
Writeback:           0 kB
AnonPages:       59260 kB
Mapped:          15440 kB
Slab:            44964 kB
PageTables:       4048 kB
NFS_Unstable:        0 kB
Bounce:              0 kB
CommitLimit:   5222476 kB
Committed_AS:   181424 kB
VmallocTotal: 34359738367 kB
VmallocUsed:    264948 kB
VmallocChunk: 34359471699 kB
HugePages_Total:     0
HugePages_Free:      0
HugePages_Rsvd:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 62492 MiB
End job on node047 at 2010-06-15 19:54:46