Trace number 1885668

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds. The first timestamp (if present) is estimated CPU time. The last timestamp is wall clock time.

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerCPU timeWall clock time
SCIPclp SCIP 1.1.0.7 with CLP 1.8.2? (MO) 51.9271 51.9459

General information on the benchmark

Name/PURE-SAT/SAT09/APPLICATIONS/
bioinfo/q_query_3_L60_coli.sat.opb
MD5SUMd962174f5667aa86f76af4064e4a9b7b
Bench CategoryPURE-SAT (instances containing only clauses)
Best result obtained on this benchmarkSAT
Best value of the objective obtained on this benchmark0
Best CPU time to get the best result obtained on this benchmark99.7898
Has Objective FunctionNO
Satisfiable
(Un)Satisfiability was proved
Best value of the objective function
Optimality of the best value was proved
Number of variables187517
Total number of constraints863483
Number of constraints which are clauses863483
Number of constraints which are cardinality constraints (but not clauses)0
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint11
Number of terms in the objective function 0
Biggest coefficient in the objective function 0
Number of bits for the biggest coefficient in the objective function 0
Sum of the numbers in the objective function 0
Number of bits of the sum of numbers in the objective function 0
Biggest number in a constraint 2
Number of bits of the biggest number in a constraint 2
Biggest sum of numbers in a constraint 12
Number of bits of the biggest sum of numbers4
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data 

12.59/12.66	c SCIP version 1.1.0.7
12.59/12.66	c LP-Solver Clp 1.8.2
12.59/12.66	c user parameter file <scip.set> not found - using default parameters
12.59/12.66	c read problem <HOME/instance-1885668-1245268469.opb>
12.59/12.66	c original problem has 187517 variables (187517 bin, 0 int, 0 impl, 0 cont) and 863483 constraints
15.69/15.74	c No objective function, only one solution is needed.
15.69/15.74	c start presolving problem
15.69/15.74	c presolving:
21.99/22.07	c (round 1) 40065 del vars, 61265 del conss, 29360 chg bounds, 9 chg sides, 24 chg coeffs, 0 upgd conss, 1395548 impls, 0 clqs
26.29/26.37	c (round 2) 69576 del vars, 219345 del conss, 36067 chg bounds, 14 chg sides, 33 chg coeffs, 0 upgd conss, 1468718 impls, 0 clqs
30.58/30.60	c (round 3) 81859 del vars, 335713 del conss, 36709 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3442841 impls, 0 clqs
33.48/33.51	c (round 4) 85436 del vars, 397436 del conss, 37338 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3948911 impls, 0 clqs
34.38/34.41	c (round 5) 85811 del vars, 404329 del conss, 37483 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3996777 impls, 0 clqs
34.78/34.85	c (round 6) 85875 del vars, 405141 del conss, 37547 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3996777 impls, 0 clqs
35.18/35.24	c (round 7) 85875 del vars, 405205 del conss, 37547 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3996777 impls, 0 clqs
39.98/40.04	c (round 8) 85875 del vars, 405688 del conss, 37547 chg bounds, 450 chg sides, 651 chg coeffs, 457795 upgd conss, 3996777 impls, 0 clqs
40.98/41.06	c presolving (9 rounds):
40.98/41.06	c  85875 deleted vars, 405688 deleted constraints, 37547 tightened bounds, 0 added holes, 450 changed sides, 651 changed coefficients
40.98/41.06	c  3996777 implications, 0 cliques
40.98/41.06	c presolved problem has 101642 variables (101642 bin, 0 int, 0 impl, 0 cont) and 457795 constraints
40.98/41.06	c  457795 constraints of type <logicor>
40.98/41.07	c transformed objective value is always integral (scale: 1)
40.98/41.07	c Presolving Time: 22.66
40.98/41.07	c PURESAT
40.98/41.07	c -----------------------------------------------------------------------------------------------
40.98/41.07	c # frequency for calling separator <flowcover> (-1: never, 0: only in root node)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 0]
40.98/41.07	c separating/flowcover/freq = c -1
40.98/41.07	c # frequency for calling separator <cmir> (-1: never, 0: only in root node)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 0]
40.98/41.07	c separating/cmir/freq = c -1
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/veclendiving/maxlpiterofs = c 1500
40.98/41.07	c # maximal fraction of diving LP iterations compared to node LP iterations
40.98/41.07	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
40.98/41.07	c heuristics/veclendiving/maxlpiterquot = c 0.075
40.98/41.07	c # frequency for calling primal heuristic <veclendiving> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 10]
40.98/41.07	c heuristics/veclendiving/freq = c -1
40.98/41.07	c # frequency for calling primal heuristic <simplerounding> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 1]
40.98/41.07	c heuristics/simplerounding/freq = c -1
40.98/41.07	c # frequency for calling primal heuristic <shifting> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 10]
40.98/41.07	c heuristics/shifting/freq = c -1
40.98/41.07	c # frequency for calling primal heuristic <rounding> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 1]
40.98/41.07	c heuristics/rounding/freq = c -1
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/rootsoldiving/maxlpiterofs = c 1500
40.98/41.07	c # maximal fraction of diving LP iterations compared to node LP iterations
40.98/41.07	c # [type: real, range: [0,1.79769313486232e+308], default: 0.01]
40.98/41.07	c heuristics/rootsoldiving/maxlpiterquot = c 0.015
40.98/41.07	c # frequency for calling primal heuristic <rootsoldiving> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 20]
40.98/41.07	c heuristics/rootsoldiving/freq = c -1
40.98/41.07	c # number of nodes added to the contingent of the total nodes
40.98/41.07	c # [type: longint, range: [0,9223372036854775807], default: 500]
40.98/41.07	c heuristics/rens/nodesofs = c 2000
40.98/41.07	c # minimum percentage of integer variables that have to be fixable 
40.98/41.07	c # [type: real, range: [0,1], default: 0.5]
40.98/41.07	c heuristics/rens/minfixingrate = c 0.3
40.98/41.07	c # frequency for calling primal heuristic <rens> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 0]
40.98/41.07	c heuristics/rens/freq = c -1
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/pscostdiving/maxlpiterofs = c 1500
40.98/41.07	c # maximal fraction of diving LP iterations compared to node LP iterations
40.98/41.07	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
40.98/41.07	c heuristics/pscostdiving/maxlpiterquot = c 0.075
40.98/41.07	c # frequency for calling primal heuristic <pscostdiving> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 10]
40.98/41.07	c heuristics/pscostdiving/freq = c -1
40.98/41.07	c # frequency for calling primal heuristic <oneopt> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 1]
40.98/41.07	c heuristics/oneopt/freq = c -1
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/objpscostdiving/maxlpiterofs = c 1500
40.98/41.07	c # maximal fraction of diving LP iterations compared to total iteration number
40.98/41.07	c # [type: real, range: [0,1], default: 0.01]
40.98/41.07	c heuristics/objpscostdiving/maxlpiterquot = c 0.015
40.98/41.07	c # frequency for calling primal heuristic <objpscostdiving> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 20]
40.98/41.07	c heuristics/objpscostdiving/freq = c -1
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/linesearchdiving/maxlpiterofs = c 1500
40.98/41.07	c # maximal fraction of diving LP iterations compared to node LP iterations
40.98/41.07	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
40.98/41.07	c heuristics/linesearchdiving/maxlpiterquot = c 0.075
40.98/41.07	c # frequency for calling primal heuristic <linesearchdiving> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 10]
40.98/41.07	c heuristics/linesearchdiving/freq = c -1
40.98/41.07	c # frequency for calling primal heuristic <intshifting> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 10]
40.98/41.07	c heuristics/intshifting/freq = c -1
40.98/41.07	c # maximal fraction of diving LP iterations compared to node LP iterations
40.98/41.07	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
40.98/41.07	c heuristics/intdiving/maxlpiterquot = c 0.075
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/guideddiving/maxlpiterofs = c 1500
40.98/41.07	c # maximal fraction of diving LP iterations compared to node LP iterations
40.98/41.07	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
40.98/41.07	c heuristics/guideddiving/maxlpiterquot = c 0.075
40.98/41.07	c # frequency for calling primal heuristic <guideddiving> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 10]
40.98/41.07	c heuristics/guideddiving/freq = c -1
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/fracdiving/maxlpiterofs = c 1500
40.98/41.07	c # maximal fraction of diving LP iterations compared to node LP iterations
40.98/41.07	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
40.98/41.07	c heuristics/fracdiving/maxlpiterquot = c 0.075
40.98/41.07	c # frequency for calling primal heuristic <fracdiving> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 10]
40.98/41.07	c heuristics/fracdiving/freq = c -1
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/feaspump/maxlpiterofs = c 2000
40.98/41.07	c # frequency for calling primal heuristic <feaspump> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 20]
40.98/41.07	c heuristics/feaspump/freq = c -1
40.98/41.07	c # minimum percentage of integer variables that have to be fixed 
40.98/41.07	c # [type: real, range: [0,1], default: 0.666]
40.98/41.07	c heuristics/crossover/minfixingrate = c 0.5
40.98/41.07	c # contingent of sub problem nodes in relation to the number of nodes of the original problem
40.98/41.07	c # [type: real, range: [0,1], default: 0.1]
40.98/41.07	c heuristics/crossover/nodesquot = c 0.15
40.98/41.07	c # number of nodes without incumbent change that heuristic should wait
40.98/41.07	c # [type: longint, range: [0,9223372036854775807], default: 200]
40.98/41.07	c heuristics/crossover/nwaitingnodes = c 100
40.98/41.07	c # number of nodes added to the contingent of the total nodes
40.98/41.07	c # [type: longint, range: [0,9223372036854775807], default: 500]
40.98/41.07	c heuristics/crossover/nodesofs = c 750
40.98/41.07	c # frequency for calling primal heuristic <crossover> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 30]
40.98/41.07	c heuristics/crossover/freq = c -1
40.98/41.07	c # additional number of allowed LP iterations
40.98/41.07	c # [type: int, range: [0,2147483647], default: 1000]
40.98/41.07	c heuristics/coefdiving/maxlpiterofs = c 1500
40.98/41.07	c # maximal fraction of diving LP iterations compared to node LP iterations
40.98/41.07	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
40.98/41.07	c heuristics/coefdiving/maxlpiterquot = c 0.075
40.98/41.07	c # frequency for calling primal heuristic <coefdiving> (-1: never, 0: only at depth freqofs)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: 10]
40.98/41.07	c heuristics/coefdiving/freq = c -1
40.98/41.07	c # priority of node selection rule <dfs> in standard mode
40.98/41.07	c # [type: int, range: [-536870912,536870911], default: 0]
40.98/41.07	c nodeselection/dfs/stdpriority = c 1000000
40.98/41.07	c # maximal number of presolving rounds the presolver participates in (-1: no limit)
40.98/41.07	c # [type: int, range: [-1,2147483647], default: -1]
40.98/41.07	c presolving/probing/maxrounds = c 0
40.98/41.07	c # should presolving try to simplify knapsacks
40.98/41.07	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
40.98/41.07	c constraints/knapsack/simplifyinequalities = c TRUE
40.98/41.07	c # should disaggregation of knapsack constraints be allowed in preprocessing?
40.98/41.07	c # [type: bool, range: {TRUE,FALSE}, default: TRUE]
40.98/41.07	c constraints/knapsack/disaggregation = c FALSE
40.98/41.07	c # maximal number of cardinality inequalities lifted per separation round (-1: unlimited)
41.17/41.20	c # [type: int, range: [-1,2147483647], default: -1]
41.17/41.20	c constraints/knapsack/maxnumcardlift = c 0
41.17/41.20	c # should presolving try to simplify inequalities
41.17/41.20	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
41.17/41.20	c constraints/linear/simplifyinequalities = c TRUE
41.17/41.20	c # maximal number of separation rounds in the root node (-1: unlimited)
41.17/41.20	c # [type: int, range: [-1,2147483647], default: -1]
41.17/41.20	c separating/maxroundsroot = c 5
41.17/41.20	c # maximal number of separation rounds per node (-1: unlimited)
41.17/41.20	c # [type: int, range: [-1,2147483647], default: 5]
41.17/41.20	c separating/maxrounds = c 1
41.17/41.20	c # LP pricing strategy ('l'pi default, 'a'uto, 'f'ull pricing, 'p'artial, 's'teepest edge pricing, 'q'uickstart steepest edge pricing, 'd'evex pricing)
41.17/41.20	c # [type: char, range: {lafpsqd}, default: l]
41.17/41.20	c lp/pricing = c a
41.17/41.20	c # frequency for solving LP at the nodes (-1: never; 0: only root LP)
41.17/41.20	c # [type: int, range: [-1,2147483647], default: 1]
41.17/41.20	c lp/solvefreq = c 0
41.17/41.20	c # solving stops, if the given number of solutions were found (-1: no limit)
41.17/41.20	c # [type: int, range: [-1,2147483647], default: -1]
41.17/41.20	c limits/solutions = c 1
41.17/41.20	c # maximal memory usage in MB; reported memory usage is lower than real memory usage!
41.17/41.20	c # [type: real, range: [0,1.79769313486232e+308], default: 1e+20]
41.17/41.20	c limits/memory = c 1620
41.17/41.20	c # maximal time in seconds to run
41.17/41.20	c # [type: real, range: [0,1.79769313486232e+308], default: 1e+20]
41.17/41.20	c limits/time = c 1791
41.17/41.20	c # frequency for displaying node information lines
41.17/41.20	c # [type: int, range: [-1,2147483647], default: 100]
41.17/41.20	c display/freq = c 10000
41.17/41.20	c # should enforcement of pseudo solution be disabled?
41.17/41.20	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
41.17/41.20	c constraints/disableenfops = c TRUE
41.17/41.20	c # maximum age an unnecessary constraint can reach before it is deleted (0: dynamic, -1: keep all constraints)
41.17/41.20	c # [type: int, range: [-1,2147483647], default: 0]
41.17/41.20	c constraints/agelimit = c 1
41.17/41.20	c # should binary conflicts be preferred?
41.17/41.20	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
41.17/41.20	c conflict/preferbinary = c TRUE
41.17/41.20	c # maximal number of intermediate conflict constraints generated in conflict graph (-1: use every intermediate constraint)
41.17/41.20	c # [type: int, range: [-1,2147483647], default: -1]
41.17/41.20	c conflict/interconss = c 0
41.17/41.20	c -----------------------------------------------------------------------------------------------
41.17/41.20	c start solving problem
41.17/41.20	c

Verifier Data 

ERROR: no interpretation found !

Watcher Data 

runsolver version 3.2.9 (svn:492) (c) roussel@cril.univ-artois.fr

command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-1885668-1245268469/watcher-1885668-1245268469 -o /tmp/evaluation-result-1885668-1245268469/solver-1885668-1245268469 -C 1800 -W 2000 -M 1800 HOME/pbscip.linux.x86_64.gnu.opt-gcc42.clp -t 1800 -m 1800 -f HOME/instance-1885668-1245268469.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 2000 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.92 0.98 0.99 3/65 11333
/proc/meminfo: memFree=1694976/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=7616 CPUtime=0
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 741 0 0 0 0 0 0 0 18 0 1 0 194443911 7798784 725 1992294400 4194304 9342243 548682068736 18446744073709551615 4402248 0 0 4096 0 0 0 0 17 0 0 0
/proc/11333/statm: 1904 736 353 1256 0 643 0

[startup+0.070262 s]
/proc/loadavg: 0.92 0.98 0.99 3/65 11333
/proc/meminfo: memFree=1694976/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=13568 CPUtime=0.06
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 2351 0 0 0 6 0 0 0 18 0 1 0 194443911 13893632 2335 1992294400 4194304 9342243 548682068736 18446744073709551615 8169872 0 0 4096 0 0 0 0 17 0 0 0
/proc/11333/statm: 3392 2335 376 1256 0 2131 0
Current children cumulated CPU time (s) 0.06
Current children cumulated vsize (KiB) 13568

[startup+0.101268 s]
/proc/loadavg: 0.92 0.98 0.99 3/65 11333
/proc/meminfo: memFree=1694976/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=16068 CPUtime=0.09
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 2975 0 0 0 8 1 0 0 18 0 1 0 194443911 16453632 2959 1992294400 4194304 9342243 548682068736 18446744073709551615 8247758 0 0 4096 0 0 0 0 17 0 0 0
/proc/11333/statm: 4017 2959 376 1256 0 2756 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 16068

[startup+0.301309 s]
/proc/loadavg: 0.92 0.98 0.99 3/65 11333
/proc/meminfo: memFree=1694976/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=25976 CPUtime=0.29
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 5474 0 0 0 27 2 0 0 19 0 1 0 194443911 26599424 5458 1992294400 4194304 9342243 548682068736 18446744073709551615 8247753 0 0 4096 0 0 0 0 17 0 0 0
/proc/11333/statm: 6494 5458 376 1256 0 5233 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 25976

[startup+0.701392 s]
/proc/loadavg: 0.92 0.98 0.99 3/65 11333
/proc/meminfo: memFree=1694976/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=40648 CPUtime=0.69
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 9125 0 0 0 65 4 0 0 23 0 1 0 194443911 41623552 9109 1992294400 4194304 9342243 548682068736 18446744073709551615 8247753 0 0 4096 0 0 0 0 17 0 0 0
/proc/11333/statm: 10162 9109 376 1256 0 8901 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 40648

[startup+1.50156 s]
/proc/loadavg: 0.92 0.98 0.99 2/66 11334
/proc/meminfo: memFree=1650488/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=69096 CPUtime=1.49
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 16247 0 0 0 142 7 0 0 25 0 1 0 194443911 70754304 16231 1992294400 4194304 9342243 548682068736 18446744073709551615 8247753 0 0 4096 0 0 0 0 17 0 0 0
/proc/11333/statm: 17274 16231 376 1256 0 16013 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 69096

[startup+3.10188 s]
/proc/loadavg: 0.92 0.98 0.99 2/66 11334
/proc/meminfo: memFree=1612024/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=123340 CPUtime=3.09
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 29773 0 0 0 296 13 0 0 25 0 1 0 194443911 126300160 29757 1992294400 4194304 9342243 548682068736 18446744073709551615 5538352 0 0 4096 0 0 0 0 17 0 0 0
/proc/11333/statm: 30835 29757 376 1256 0 29574 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 123340

[startup+6.30155 s]
/proc/loadavg: 0.93 0.98 0.99 2/66 11334
/proc/meminfo: memFree=1499064/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=233124 CPUtime=6.29
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 57136 0 0 0 605 24 0 0 25 0 1 0 194443911 238718976 57120 1992294400 4194304 9342243 548682068736 18446744073709551615 8247758 0 0 4096 0 0 0 0 17 0 0 0
/proc/11333/statm: 58281 57120 376 1256 0 57020 0
Current children cumulated CPU time (s) 6.29
Current children cumulated vsize (KiB) 233124

[startup+12.7019 s]
/proc/loadavg: 0.93 0.98 0.99 2/66 11334
/proc/meminfo: memFree=1283392/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=441744 CPUtime=12.69
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 109243 0 0 0 1222 47 0 0 25 0 1 0 194443911 452345856 108874 1992294400 4194304 9342243 548682068736 18446744073709551615 4402248 0 0 4096 16384 0 0 0 17 0 0 0
/proc/11333/statm: 110436 108884 406 1256 0 109175 0
Current children cumulated CPU time (s) 12.69
Current children cumulated vsize (KiB) 441744

[startup+25.5015 s]
/proc/loadavg: 0.95 0.98 0.99 2/66 11334
/proc/meminfo: memFree=520576/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=1197976 CPUtime=25.48
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 294049 0 0 0 2328 220 0 0 25 0 1 0 194443911 1226727424 293679 1992294400 4194304 9342243 548682068736 18446744073709551615 5020631 0 0 4096 16384 0 0 0 17 0 0 0
/proc/11333/statm: 299494 293679 474 1256 0 298233 0
Current children cumulated CPU time (s) 25.48
Current children cumulated vsize (KiB) 1197976



Maximum VSize exceeded: sending SIGTERM then SIGKILL

[startup+49.7015 s]
/proc/loadavg: 0.96 0.98 0.99 2/66 11334
/proc/meminfo: memFree=86400/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=1848080 CPUtime=49.68
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 499407 0 0 0 4481 487 0 0 25 0 1 0 194443911 1892433920 402049 1992294400 4194304 9342243 548682068736 18446744073709551615 6239288 0 0 4096 16384 0 0 0 17 0 0 0
/proc/11333/statm: 462020 402049 611 1256 0 460759 0
Current children cumulated CPU time (s) 49.68
Current children cumulated vsize (KiB) 1848080

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

[startup+51.1018 s]
/proc/loadavg: 0.96 0.98 0.99 2/67 11335
/proc/meminfo: memFree=85304/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=1850264 CPUtime=51.08
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 510376 0 0 0 4617 491 0 0 25 0 1 0 194443911 1894670336 410143 1992294400 4194304 9342243 548682068736 18446744073709551615 5877415 0 0 4096 16384 0 0 0 17 0 0 0
/proc/11333/statm: 462566 410143 611 1256 0 461305 0
Current children cumulated CPU time (s) 51.08
Current children cumulated vsize (KiB) 1850264

Sending SIGKILL to process tree (bottom up)

Sending SIGKILL to -11333

Solver just ended. Dumping a history of the last processes samples

[startup+51.4018 s]
/proc/loadavg: 0.96 0.98 0.99 2/67 11335
/proc/meminfo: memFree=85304/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=1850264 CPUtime=51.37
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4194304 510500 0 0 0 4646 491 0 0 25 0 1 0 194443911 1894670336 410267 1992294400 4194304 9342243 548682068736 18446744073709551615 6968220 0 0 4096 16384 0 0 0 17 0 0 0
/proc/11333/statm: 462566 410267 611 1256 0 461305 0
Current children cumulated CPU time (s) 51.37
Current children cumulated vsize (KiB) 1850264

[startup+51.8019 s]
/proc/loadavg: 0.96 0.98 0.99 2/67 11335
/proc/meminfo: memFree=53304/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=0 CPUtime=51.77
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4195332 510556 0 0 0 4677 500 0 0 25 0 1 0 194443911 0 0 1992294400 0 0 0 0 0 0 0 4096 16384 0 0 0 17 0 0 0
/proc/11333/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 51.77
Current children cumulated vsize (KiB) 0

[startup+51.902 s]
/proc/loadavg: 0.96 0.98 0.99 2/67 11335
/proc/meminfo: memFree=53304/2055920 swapFree=4192812/4192956
[pid=11333] ppid=11331 vsize=0 CPUtime=51.87
/proc/11333/stat : 11333 (pbscip.linux.x8) R 11331 11333 11296 0 -1 4195332 510556 0 0 0 4677 510 0 0 25 0 1 0 194443911 0 0 1992294400 0 0 0 0 0 0 0 4096 16384 0 0 0 17 0 0 0
/proc/11333/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 51.87
Current children cumulated vsize (KiB) 0

Child ended because it received signal 9 (SIGKILL)
Real time (s): 51.9459
CPU time (s): 51.9271
CPU user time (s): 46.7739
CPU system time (s): 5.15322
CPU usage (%): 99.9638
Max. virtual memory (cumulated for all children) (KiB): 1850264

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 46.7739
system time used= 5.15322
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 510556
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 5
involuntary context switches= 142

runsolver used 0.050992 second user time and 0.150977 second system time

The end

Launcher Data 

Begin job on node54 at 2009-06-17 21:54:31
IDJOB=1885668
IDBENCH=72080
IDSOLVER=684
FILE ID=node54/1885668-1245268469
PBS_JOBID= 9372462
Free space on /tmp= 66468 MiB

SOLVER NAME= SCIPclp SCIP 1.1.0.7 with CLP 1.8.2
BENCH NAME= PB09/normalized-PB09/PURE-SAT/SAT09/APPLICATIONS/bioinfo/q_query_3_L60_coli.sat.opb
COMMAND LINE= HOME/pbscip.linux.x86_64.gnu.opt-gcc42.clp -t TIMEOUT -m MEMLIMIT -f BENCHNAME
RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-1885668-1245268469/watcher-1885668-1245268469 -o /tmp/evaluation-result-1885668-1245268469/solver-1885668-1245268469 -C 1800 -W 2000 -M 1800  HOME/pbscip.linux.x86_64.gnu.opt-gcc42.clp -t 1800 -m 1800 -f HOME/instance-1885668-1245268469.opb

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB
MAX NB THREAD= 0

MD5SUM BENCH= d962174f5667aa86f76af4064e4a9b7b
RANDOM SEED=468384232

node54.alineos.net Linux 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.259
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5931.00
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.259
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1695464 kB
Buffers:         48516 kB
Cached:         235724 kB
SwapCached:          0 kB
Active:         115096 kB
Inactive:       182804 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1695464 kB
SwapTotal:     4192956 kB
SwapFree:      4192812 kB
Dirty:           41588 kB
Writeback:           0 kB
Mapped:          23464 kB
Slab:            48520 kB
Committed_AS:   141064 kB
PageTables:       1372 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264960 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66456 MiB
End job on node54 at 2009-06-17 21:55:23