Trace number 1885667

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds. The first timestamp (if present) is estimated CPU time. The last timestamp is wall clock time.

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerCPU timeWall clock time
SCIPspx SCIP 1.1.0.7 with SoPLEX 1.4.1(24.4.2009)? (MO) 488.327 488.555

General information on the benchmark

Name/PURE-SAT/SAT09/APPLICATIONS/
bioinfo/q_query_3_L60_coli.sat.opb
MD5SUMd962174f5667aa86f76af4064e4a9b7b
Bench CategoryPURE-SAT (instances containing only clauses)
Best result obtained on this benchmarkSAT
Best value of the objective obtained on this benchmark0
Best CPU time to get the best result obtained on this benchmark99.7898
Has Objective FunctionNO
Satisfiable
(Un)Satisfiability was proved
Best value of the objective function
Optimality of the best value was proved
Number of variables187517
Total number of constraints863483
Number of constraints which are clauses863483
Number of constraints which are cardinality constraints (but not clauses)0
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint11
Number of terms in the objective function 0
Biggest coefficient in the objective function 0
Number of bits for the biggest coefficient in the objective function 0
Sum of the numbers in the objective function 0
Number of bits of the sum of numbers in the objective function 0
Biggest number in a constraint 2
Number of bits of the biggest number in a constraint 2
Biggest sum of numbers in a constraint 12
Number of bits of the biggest sum of numbers4
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data 

12.59/12.65	c SCIP version 1.1.0.7
12.59/12.65	c LP-Solver SoPlex 1.4.1
12.59/12.65	c user parameter file <scip.set> not found - using default parameters
12.59/12.65	c read problem <HOME/instance-1885667-1245268457.opb>
12.59/12.65	c original problem has 187517 variables (187517 bin, 0 int, 0 impl, 0 cont) and 863483 constraints
15.68/15.72	c No objective function, only one solution is needed.
15.68/15.72	c start presolving problem
15.68/15.72	c presolving:
21.98/22.03	c (round 1) 40065 del vars, 61265 del conss, 29360 chg bounds, 9 chg sides, 24 chg coeffs, 0 upgd conss, 1395548 impls, 0 clqs
26.28/26.33	c (round 2) 69576 del vars, 219345 del conss, 36067 chg bounds, 14 chg sides, 33 chg coeffs, 0 upgd conss, 1468718 impls, 0 clqs
30.48/30.56	c (round 3) 81859 del vars, 335713 del conss, 36709 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3442841 impls, 0 clqs
33.47/33.53	c (round 4) 85436 del vars, 397436 del conss, 37338 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3948911 impls, 0 clqs
34.37/34.43	c (round 5) 85811 del vars, 404329 del conss, 37483 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3996777 impls, 0 clqs
34.77/34.87	c (round 6) 85875 del vars, 405141 del conss, 37547 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3996777 impls, 0 clqs
35.18/35.26	c (round 7) 85875 del vars, 405205 del conss, 37547 chg bounds, 450 chg sides, 651 chg coeffs, 0 upgd conss, 3996777 impls, 0 clqs
40.05/40.10	c (round 8) 85875 del vars, 405688 del conss, 37547 chg bounds, 450 chg sides, 651 chg coeffs, 457795 upgd conss, 3996777 impls, 0 clqs
41.06/41.12	c presolving (9 rounds):
41.06/41.12	c  85875 deleted vars, 405688 deleted constraints, 37547 tightened bounds, 0 added holes, 450 changed sides, 651 changed coefficients
41.06/41.12	c  3996777 implications, 0 cliques
41.06/41.12	c presolved problem has 101642 variables (101642 bin, 0 int, 0 impl, 0 cont) and 457795 constraints
41.06/41.12	c  457795 constraints of type <logicor>
41.06/41.12	c transformed objective value is always integral (scale: 1)
41.06/41.12	c Presolving Time: 22.70
41.06/41.12	c PURESAT
41.06/41.12	c -----------------------------------------------------------------------------------------------
41.06/41.12	c # frequency for calling separator <flowcover> (-1: never, 0: only in root node)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 0]
41.06/41.12	c separating/flowcover/freq = c -1
41.06/41.12	c # frequency for calling separator <cmir> (-1: never, 0: only in root node)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 0]
41.06/41.12	c separating/cmir/freq = c -1
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/veclendiving/maxlpiterofs = c 1500
41.06/41.12	c # maximal fraction of diving LP iterations compared to node LP iterations
41.06/41.12	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
41.06/41.12	c heuristics/veclendiving/maxlpiterquot = c 0.075
41.06/41.12	c # frequency for calling primal heuristic <veclendiving> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 10]
41.06/41.12	c heuristics/veclendiving/freq = c -1
41.06/41.12	c # frequency for calling primal heuristic <simplerounding> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 1]
41.06/41.12	c heuristics/simplerounding/freq = c -1
41.06/41.12	c # frequency for calling primal heuristic <shifting> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 10]
41.06/41.12	c heuristics/shifting/freq = c -1
41.06/41.12	c # frequency for calling primal heuristic <rounding> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 1]
41.06/41.12	c heuristics/rounding/freq = c -1
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/rootsoldiving/maxlpiterofs = c 1500
41.06/41.12	c # maximal fraction of diving LP iterations compared to node LP iterations
41.06/41.12	c # [type: real, range: [0,1.79769313486232e+308], default: 0.01]
41.06/41.12	c heuristics/rootsoldiving/maxlpiterquot = c 0.015
41.06/41.12	c # frequency for calling primal heuristic <rootsoldiving> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 20]
41.06/41.12	c heuristics/rootsoldiving/freq = c -1
41.06/41.12	c # number of nodes added to the contingent of the total nodes
41.06/41.12	c # [type: longint, range: [0,9223372036854775807], default: 500]
41.06/41.12	c heuristics/rens/nodesofs = c 2000
41.06/41.12	c # minimum percentage of integer variables that have to be fixable 
41.06/41.12	c # [type: real, range: [0,1], default: 0.5]
41.06/41.12	c heuristics/rens/minfixingrate = c 0.3
41.06/41.12	c # frequency for calling primal heuristic <rens> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 0]
41.06/41.12	c heuristics/rens/freq = c -1
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/pscostdiving/maxlpiterofs = c 1500
41.06/41.12	c # maximal fraction of diving LP iterations compared to node LP iterations
41.06/41.12	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
41.06/41.12	c heuristics/pscostdiving/maxlpiterquot = c 0.075
41.06/41.12	c # frequency for calling primal heuristic <pscostdiving> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 10]
41.06/41.12	c heuristics/pscostdiving/freq = c -1
41.06/41.12	c # frequency for calling primal heuristic <oneopt> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 1]
41.06/41.12	c heuristics/oneopt/freq = c -1
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/objpscostdiving/maxlpiterofs = c 1500
41.06/41.12	c # maximal fraction of diving LP iterations compared to total iteration number
41.06/41.12	c # [type: real, range: [0,1], default: 0.01]
41.06/41.12	c heuristics/objpscostdiving/maxlpiterquot = c 0.015
41.06/41.12	c # frequency for calling primal heuristic <objpscostdiving> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 20]
41.06/41.12	c heuristics/objpscostdiving/freq = c -1
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/linesearchdiving/maxlpiterofs = c 1500
41.06/41.12	c # maximal fraction of diving LP iterations compared to node LP iterations
41.06/41.12	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
41.06/41.12	c heuristics/linesearchdiving/maxlpiterquot = c 0.075
41.06/41.12	c # frequency for calling primal heuristic <linesearchdiving> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 10]
41.06/41.12	c heuristics/linesearchdiving/freq = c -1
41.06/41.12	c # frequency for calling primal heuristic <intshifting> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 10]
41.06/41.12	c heuristics/intshifting/freq = c -1
41.06/41.12	c # maximal fraction of diving LP iterations compared to node LP iterations
41.06/41.12	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
41.06/41.12	c heuristics/intdiving/maxlpiterquot = c 0.075
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/guideddiving/maxlpiterofs = c 1500
41.06/41.12	c # maximal fraction of diving LP iterations compared to node LP iterations
41.06/41.12	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
41.06/41.12	c heuristics/guideddiving/maxlpiterquot = c 0.075
41.06/41.12	c # frequency for calling primal heuristic <guideddiving> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 10]
41.06/41.12	c heuristics/guideddiving/freq = c -1
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/fracdiving/maxlpiterofs = c 1500
41.06/41.12	c # maximal fraction of diving LP iterations compared to node LP iterations
41.06/41.12	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
41.06/41.12	c heuristics/fracdiving/maxlpiterquot = c 0.075
41.06/41.12	c # frequency for calling primal heuristic <fracdiving> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 10]
41.06/41.12	c heuristics/fracdiving/freq = c -1
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/feaspump/maxlpiterofs = c 2000
41.06/41.12	c # frequency for calling primal heuristic <feaspump> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 20]
41.06/41.12	c heuristics/feaspump/freq = c -1
41.06/41.12	c # minimum percentage of integer variables that have to be fixed 
41.06/41.12	c # [type: real, range: [0,1], default: 0.666]
41.06/41.12	c heuristics/crossover/minfixingrate = c 0.5
41.06/41.12	c # contingent of sub problem nodes in relation to the number of nodes of the original problem
41.06/41.12	c # [type: real, range: [0,1], default: 0.1]
41.06/41.12	c heuristics/crossover/nodesquot = c 0.15
41.06/41.12	c # number of nodes without incumbent change that heuristic should wait
41.06/41.12	c # [type: longint, range: [0,9223372036854775807], default: 200]
41.06/41.12	c heuristics/crossover/nwaitingnodes = c 100
41.06/41.12	c # number of nodes added to the contingent of the total nodes
41.06/41.12	c # [type: longint, range: [0,9223372036854775807], default: 500]
41.06/41.12	c heuristics/crossover/nodesofs = c 750
41.06/41.12	c # frequency for calling primal heuristic <crossover> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 30]
41.06/41.12	c heuristics/crossover/freq = c -1
41.06/41.12	c # additional number of allowed LP iterations
41.06/41.12	c # [type: int, range: [0,2147483647], default: 1000]
41.06/41.12	c heuristics/coefdiving/maxlpiterofs = c 1500
41.06/41.12	c # maximal fraction of diving LP iterations compared to node LP iterations
41.06/41.12	c # [type: real, range: [0,1.79769313486232e+308], default: 0.05]
41.06/41.12	c heuristics/coefdiving/maxlpiterquot = c 0.075
41.06/41.12	c # frequency for calling primal heuristic <coefdiving> (-1: never, 0: only at depth freqofs)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: 10]
41.06/41.12	c heuristics/coefdiving/freq = c -1
41.06/41.12	c # priority of node selection rule <dfs> in standard mode
41.06/41.12	c # [type: int, range: [-536870912,536870911], default: 0]
41.06/41.12	c nodeselection/dfs/stdpriority = c 1000000
41.06/41.12	c # maximal number of presolving rounds the presolver participates in (-1: no limit)
41.06/41.12	c # [type: int, range: [-1,2147483647], default: -1]
41.06/41.12	c presolving/probing/maxrounds = c 0
41.06/41.12	c # should presolving try to simplify knapsacks
41.06/41.12	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
41.06/41.12	c constraints/knapsack/simplifyinequalities = c TRUE
41.06/41.12	c # should disaggregation of knapsack constraints be allowed in preprocessing?
41.06/41.12	c # [type: bool, range: {TRUE,FALSE}, default: TRUE]
41.06/41.12	c constraints/knapsack/disaggregation = c FALSE
41.06/41.12	c # maximal number of cardinality inequalities lifted per separation round (-1: unlimited)
41.16/41.26	c # [type: int, range: [-1,2147483647], default: -1]
41.16/41.26	c constraints/knapsack/maxnumcardlift = c 0
41.16/41.26	c # should presolving try to simplify inequalities
41.16/41.26	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
41.16/41.26	c constraints/linear/simplifyinequalities = c TRUE
41.16/41.26	c # maximal number of separation rounds in the root node (-1: unlimited)
41.16/41.26	c # [type: int, range: [-1,2147483647], default: -1]
41.16/41.26	c separating/maxroundsroot = c 5
41.16/41.26	c # maximal number of separation rounds per node (-1: unlimited)
41.16/41.26	c # [type: int, range: [-1,2147483647], default: 5]
41.16/41.26	c separating/maxrounds = c 1
41.16/41.26	c # LP pricing strategy ('l'pi default, 'a'uto, 'f'ull pricing, 'p'artial, 's'teepest edge pricing, 'q'uickstart steepest edge pricing, 'd'evex pricing)
41.16/41.26	c # [type: char, range: {lafpsqd}, default: l]
41.16/41.26	c lp/pricing = c a
41.16/41.26	c # frequency for solving LP at the nodes (-1: never; 0: only root LP)
41.16/41.26	c # [type: int, range: [-1,2147483647], default: 1]
41.16/41.26	c lp/solvefreq = c 0
41.16/41.26	c # solving stops, if the given number of solutions were found (-1: no limit)
41.16/41.26	c # [type: int, range: [-1,2147483647], default: -1]
41.16/41.26	c limits/solutions = c 1
41.16/41.26	c # maximal memory usage in MB; reported memory usage is lower than real memory usage!
41.16/41.26	c # [type: real, range: [0,1.79769313486232e+308], default: 1e+20]
41.16/41.26	c limits/memory = c 1620
41.16/41.26	c # maximal time in seconds to run
41.16/41.26	c # [type: real, range: [0,1.79769313486232e+308], default: 1e+20]
41.16/41.26	c limits/time = c 1791
41.16/41.26	c # frequency for displaying node information lines
41.16/41.26	c # [type: int, range: [-1,2147483647], default: 100]
41.16/41.26	c display/freq = c 10000
41.16/41.26	c # should enforcement of pseudo solution be disabled?
41.16/41.26	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
41.16/41.26	c constraints/disableenfops = c TRUE
41.16/41.26	c # maximum age an unnecessary constraint can reach before it is deleted (0: dynamic, -1: keep all constraints)
41.16/41.26	c # [type: int, range: [-1,2147483647], default: 0]
41.16/41.26	c constraints/agelimit = c 1
41.16/41.26	c # should binary conflicts be preferred?
41.16/41.26	c # [type: bool, range: {TRUE,FALSE}, default: FALSE]
41.16/41.26	c conflict/preferbinary = c TRUE
41.16/41.26	c # maximal number of intermediate conflict constraints generated in conflict graph (-1: use every intermediate constraint)
41.16/41.26	c # [type: int, range: [-1,2147483647], default: -1]
41.16/41.26	c conflict/interconss = c 0
41.16/41.26	c -----------------------------------------------------------------------------------------------
41.16/41.26	c start solving problem
41.16/41.26	c

Verifier Data 

ERROR: no interpretation found !

Watcher Data 

runsolver version 3.2.9 (svn:492) (c) roussel@cril.univ-artois.fr

command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-1885667-1245268457/watcher-1885667-1245268457 -o /tmp/evaluation-result-1885667-1245268457/solver-1885667-1245268457 -C 1800 -W 2000 -M 1800 HOME/pbscip.linux.x86_64.gnu.opt-gcc42.spx -t 1800 -m 1800 -f HOME/instance-1885667-1245268457.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 2000 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.92 0.98 0.94 3/64 10187
/proc/meminfo: memFree=1781944/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=6100 CPUtime=0
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 629 0 0 0 0 0 0 0 18 0 1 0 194445805 6246400 611 1992294400 4194304 7823515 548682068736 18446744073709551615 4402248 0 0 4096 0 0 0 0 17 0 0 0
/proc/10187/statm: 1525 621 325 886 0 635 0

[startup+0.053277 s]
/proc/loadavg: 0.92 0.98 0.94 3/64 10187
/proc/meminfo: memFree=1781944/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=11472 CPUtime=0.04
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 2189 0 0 0 4 0 0 0 18 0 1 0 194445805 11747328 2171 1992294400 4194304 7823515 548682068736 18446744073709551615 6908062 0 0 4096 0 0 0 0 17 0 0 0
/proc/10187/statm: 2868 2171 351 886 0 1978 0
Current children cumulated CPU time (s) 0.04
Current children cumulated vsize (KiB) 11472

[startup+0.101281 s]
/proc/loadavg: 0.92 0.98 0.94 3/64 10187
/proc/meminfo: memFree=1781944/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=14500 CPUtime=0.09
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 2944 0 0 0 9 0 0 0 18 0 1 0 194445805 14848000 2926 1992294400 4194304 7823515 548682068736 18446744073709551615 6908077 0 0 4096 0 0 0 0 17 0 0 0
/proc/10187/statm: 3625 2926 351 886 0 2735 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 14500

[startup+0.301304 s]
/proc/loadavg: 0.92 0.98 0.94 3/64 10187
/proc/meminfo: memFree=1781944/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=24476 CPUtime=0.29
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 5442 0 0 0 28 1 0 0 19 0 1 0 194445805 25063424 5424 1992294400 4194304 7823515 548682068736 18446744073709551615 6854442 0 0 4096 0 0 0 0 17 0 0 0
/proc/10187/statm: 6119 5424 351 886 0 5229 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 24476

[startup+0.701349 s]
/proc/loadavg: 0.92 0.98 0.94 3/64 10187
/proc/meminfo: memFree=1781944/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=39376 CPUtime=0.69
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 9172 0 0 0 66 3 0 0 23 0 1 0 194445805 40321024 9154 1992294400 4194304 7823515 548682068736 18446744073709551615 5878822 0 0 4096 0 0 0 0 17 0 0 0
/proc/10187/statm: 9844 9154 351 886 0 8954 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 39376

[startup+1.50144 s]
/proc/loadavg: 0.93 0.98 0.94 2/65 10188
/proc/meminfo: memFree=1736688/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=67628 CPUtime=1.49
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 16214 0 0 0 143 6 0 0 25 0 1 0 194445805 69251072 16196 1992294400 4194304 7823515 548682068736 18446744073709551615 6908057 0 0 4096 0 0 0 0 17 0 0 0
/proc/10187/statm: 16907 16196 351 886 0 16017 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 67628

[startup+3.10162 s]
/proc/loadavg: 0.93 0.98 0.94 2/65 10188
/proc/meminfo: memFree=1697968/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=122040 CPUtime=3.09
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 29764 0 0 0 297 12 0 0 25 0 1 0 194445805 124968960 29746 1992294400 4194304 7823515 548682068736 18446744073709551615 6882134 0 0 4096 0 0 0 0 17 0 0 0
/proc/10187/statm: 30510 29746 351 886 0 29620 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 122040

[startup+6.30199 s]
/proc/loadavg: 0.93 0.98 0.94 2/65 10188
/proc/meminfo: memFree=1587760/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=229276 CPUtime=6.29
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 56501 0 0 0 602 27 0 0 25 0 1 0 194445805 234778624 56483 1992294400 4194304 7823515 548682068736 18446744073709551615 6908047 0 0 4096 0 0 0 0 17 0 0 0
/proc/10187/statm: 57319 56483 351 886 0 56429 0
Current children cumulated CPU time (s) 6.29
Current children cumulated vsize (KiB) 229276

[startup+12.7017 s]
/proc/loadavg: 0.94 0.98 0.94 2/65 10188
/proc/meminfo: memFree=1370168/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=443116 CPUtime=12.68
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 109692 0 0 0 1219 49 0 0 25 0 1 0 194445805 453750784 109320 1992294400 4194304 7823515 548682068736 18446744073709551615 5878822 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 110779 109330 367 886 0 109889 0
Current children cumulated CPU time (s) 12.68
Current children cumulated vsize (KiB) 443116

[startup+25.5012 s]
/proc/loadavg: 0.95 0.98 0.94 2/65 10188
/proc/meminfo: memFree=607288/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1196516 CPUtime=25.48
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 293935 0 0 0 2320 228 0 0 25 0 1 0 194445805 1225232384 293563 1992294400 4194304 7823515 548682068736 18446744073709551615 5020319 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 299129 293563 432 886 0 298239 0
Current children cumulated CPU time (s) 25.48
Current children cumulated vsize (KiB) 1196516

[startup+51.1011 s]
/proc/loadavg: 0.97 0.98 0.94 2/65 10188
/proc/meminfo: memFree=166200/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1693396 CPUtime=51.05
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 453019 0 0 0 4634 471 0 0 25 0 1 0 194445805 1734037504 403641 1992294400 4194304 7823515 548682068736 18446744073709551615 6018743 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 423349 403641 511 886 0 422459 0
Current children cumulated CPU time (s) 51.05
Current children cumulated vsize (KiB) 1693396

[startup+102.306 s]
/proc/loadavg: 0.98 0.98 0.94 2/65 10188
/proc/meminfo: memFree=93432/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1775876 CPUtime=102.22
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 473495 0 0 0 9744 478 0 0 25 0 1 0 194445805 1818497024 421770 1992294400 4194304 7823515 548682068736 18446744073709551615 6151351 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 443969 421770 514 886 0 443079 0
Current children cumulated CPU time (s) 102.22
Current children cumulated vsize (KiB) 1775876

[startup+162.302 s]
/proc/loadavg: 0.99 0.98 0.94 2/65 10188
/proc/meminfo: memFree=103992/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1768368 CPUtime=162.19
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 486099 0 0 0 15733 486 0 0 25 0 1 0 194445805 1810808832 419153 1992294400 4194304 7823515 548682068736 18446744073709551615 6212552 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 442092 419153 515 886 0 441202 0
Current children cumulated CPU time (s) 162.19
Current children cumulated vsize (KiB) 1768368

[startup+222.302 s]
/proc/loadavg: 0.99 0.98 0.94 2/65 10188
/proc/meminfo: memFree=93944/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1781036 CPUtime=222.16
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 498118 0 0 0 21723 493 0 0 25 0 1 0 194445805 1823780864 421635 1992294400 4194304 7823515 548682068736 18446744073709551615 6212422 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 445259 421635 515 886 0 444369 0
Current children cumulated CPU time (s) 222.16
Current children cumulated vsize (KiB) 1781036

[startup+282.301 s]
/proc/loadavg: 0.99 0.98 0.94 2/65 10188
/proc/meminfo: memFree=80504/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1791676 CPUtime=282.14
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 509266 0 0 0 27715 499 0 0 25 0 1 0 194445805 1834676224 424938 1992294400 4194304 7823515 548682068736 18446744073709551615 6212295 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 447919 424938 515 886 0 447029 0
Current children cumulated CPU time (s) 282.14
Current children cumulated vsize (KiB) 1791676

[startup+342.301 s]
/proc/loadavg: 0.99 0.98 0.94 2/65 10188
/proc/meminfo: memFree=76024/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1792308 CPUtime=342.11
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 513346 0 0 0 33710 501 0 0 25 0 1 0 194445805 1835323392 426064 1992294400 4194304 7823515 548682068736 18446744073709551615 6212422 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 448077 426064 515 886 0 447187 0
Current children cumulated CPU time (s) 342.11
Current children cumulated vsize (KiB) 1792308

[startup+402.301 s]
/proc/loadavg: 0.99 0.98 0.94 2/65 10188
/proc/meminfo: memFree=73144/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1792700 CPUtime=402.1
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 517121 0 0 0 39705 505 0 0 25 0 1 0 194445805 1835724800 426779 1992294400 4194304 7823515 548682068736 18446744073709551615 6151335 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 448175 426779 515 886 0 447285 0
Current children cumulated CPU time (s) 402.1
Current children cumulated vsize (KiB) 1792700

[startup+462.302 s]
/proc/loadavg: 0.99 0.98 0.94 2/65 10194
/proc/meminfo: memFree=70968/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1793156 CPUtime=462.08
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 522314 0 0 0 45699 509 0 0 25 0 1 0 194445805 1836191744 427281 1992294400 4194304 7823515 548682068736 18446744073709551615 6212552 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 448289 427281 515 886 0 447399 0
Current children cumulated CPU time (s) 462.08
Current children cumulated vsize (KiB) 1793156



Maximum VSize exceeded: sending SIGTERM then SIGKILL

[startup+486.302 s]
/proc/loadavg: 0.99 0.98 0.94 2/65 10194
/proc/meminfo: memFree=65272/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1846900 CPUtime=486.06
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 543262 0 0 0 48088 518 0 0 25 0 1 0 194445805 1891225600 429594 1992294400 4194304 7823515 548682068736 18446744073709551615 6242890 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 461725 429601 515 886 0 460835 0
Current children cumulated CPU time (s) 486.06
Current children cumulated vsize (KiB) 1846900

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Sending SIGKILL to process tree (bottom up)

Sending SIGKILL to -10187

Solver just ended. Dumping a history of the last processes samples

[startup+487.802 s]
/proc/loadavg: 0.99 0.98 0.94 2/66 10195
/proc/meminfo: memFree=70896/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1789676 CPUtime=487.57
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 546138 0 0 0 48237 520 0 0 25 0 1 0 194445805 1832628224 427307 1992294400 4194304 7823515 548682068736 18446744073709551615 6908178 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 447419 427307 515 886 0 446529 0
Current children cumulated CPU time (s) 487.57
Current children cumulated vsize (KiB) 1789676

[startup+488.202 s]
/proc/loadavg: 0.99 0.98 0.94 2/66 10195
/proc/meminfo: memFree=70896/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=1789676 CPUtime=487.97
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4194304 546138 0 0 0 48277 520 0 0 25 0 1 0 194445805 1832628224 427307 1992294400 4194304 7823515 548682068736 18446744073709551615 6151312 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 447419 427307 515 886 0 446529 0
Current children cumulated CPU time (s) 487.97
Current children cumulated vsize (KiB) 1789676

[startup+488.406 s]
/proc/loadavg: 0.99 0.98 0.94 2/66 10195
/proc/meminfo: memFree=70896/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=0 CPUtime=488.17
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4195332 546138 0 0 0 48287 530 0 0 25 0 1 0 194445805 0 0 1992294400 0 0 0 0 0 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 488.17
Current children cumulated vsize (KiB) 0

[startup+488.502 s]
/proc/loadavg: 0.99 0.98 0.94 2/66 10195
/proc/meminfo: memFree=70896/2055920 swapFree=4181924/4192956
[pid=10187] ppid=10185 vsize=0 CPUtime=488.26
/proc/10187/stat : 10187 (pbscip.linux.x8) R 10185 10187 10150 0 -1 4195332 546138 0 0 0 48287 539 0 0 25 0 1 0 194445805 0 0 1992294400 0 0 0 0 0 0 0 4096 16384 0 0 0 17 0 0 0
/proc/10187/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 488.26
Current children cumulated vsize (KiB) 0

Child ended because it received signal 9 (SIGKILL)
Real time (s): 488.555
CPU time (s): 488.327
CPU user time (s): 482.877
CPU system time (s): 5.45017
CPU usage (%): 99.9533
Max. virtual memory (cumulated for all children) (KiB): 1846900

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 482.877
system time used= 5.45017
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 546138
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 5
involuntary context switches= 1800

runsolver used 0.446932 second user time and 1.3438 second system time

The end

Launcher Data 

Begin job on node23 at 2009-06-17 21:54:19
IDJOB=1885667
IDBENCH=72080
IDSOLVER=683
FILE ID=node23/1885667-1245268457
PBS_JOBID= 9372461
Free space on /tmp= 66240 MiB

SOLVER NAME= SCIPspx SCIP 1.1.0.7 with SoPLEX 1.4.1(24.4.2009)
BENCH NAME= PB09/normalized-PB09/PURE-SAT/SAT09/APPLICATIONS/bioinfo/q_query_3_L60_coli.sat.opb
COMMAND LINE= HOME/pbscip.linux.x86_64.gnu.opt-gcc42.spx -t TIMEOUT -m MEMLIMIT -f BENCHNAME
RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-1885667-1245268457/watcher-1885667-1245268457 -o /tmp/evaluation-result-1885667-1245268457/solver-1885667-1245268457 -C 1800 -W 2000 -M 1800  HOME/pbscip.linux.x86_64.gnu.opt-gcc42.spx -t 1800 -m 1800 -f HOME/instance-1885667-1245268457.opb

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB
MAX NB THREAD= 0

MD5SUM BENCH= d962174f5667aa86f76af4064e4a9b7b
RANDOM SEED=1970629923

node23.alineos.net Linux 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.236
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.236
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1782360 kB
Buffers:         29132 kB
Cached:         181208 kB
SwapCached:       4540 kB
Active:         101312 kB
Inactive:       116544 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1782360 kB
SwapTotal:     4192956 kB
SwapFree:      4181924 kB
Dirty:           39624 kB
Writeback:           0 kB
Mapped:          14220 kB
Slab:            41736 kB
Committed_AS:   179964 kB
PageTables:       1392 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66232 MiB
End job on node23 at 2009-06-17 22:02:28