Trace number 355214

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS4 2007-03-23No Cert. 1800.1 1800.54

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.12.opb
MD5SUMb1eab2cf935e923f8f1ff9f24be23d02
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark41
Best CPU time to get the best result obtained on this benchmark97.8801
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 41
Optimality of the best value was proved YES
Number of variables25484
Total number of constraints1553328
Number of constraints which are clauses1549096
Number of constraints which are cardinality constraints (but not clauses)4232
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint184
Number of terms in the objective function 184
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 184
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 182
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 366
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Quality of the solution as a function of time


Download the above graph as a PDF file / as an EPS file

Solver Data (download as text)

0.00/0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00/0.00	c Solving /tmp/evaluation/355214-1176784051/instance-355214-1176784051.opb ......
19.98/20.00	c done parsing opb.
19.98/20.00	o 184
19.98/20.02	o 183
19.98/20.05	o 182
19.98/20.07	o 181
19.98/20.09	o 180
20.08/20.12	o 179
20.08/20.14	o 178
20.08/20.16	o 177
20.08/20.19	o 176
20.18/20.21	o 175
20.18/20.24	o 174
20.18/20.26	o 173
20.18/20.28	o 172
20.28/20.31	o 171
20.28/20.33	o 170
20.28/20.35	o 169
20.28/20.38	o 168
20.38/20.40	o 167
20.38/20.42	o 166
20.38/20.45	o 165
20.38/20.47	o 164
20.38/20.50	o 163
20.49/20.52	o 162
20.49/20.54	o 161
20.49/20.57	o 160
20.49/20.59	o 159
20.59/20.61	o 158
20.59/20.64	o 157
20.59/20.66	o 156
20.59/20.69	o 155
20.69/20.71	o 154
20.69/20.73	o 153
20.69/20.76	o 152
20.69/20.78	o 151
20.79/20.81	o 150
20.79/20.83	o 149
20.79/20.85	o 148
20.79/20.88	o 147
20.88/20.90	o 146
20.88/20.93	o 145
20.88/20.95	o 144
20.88/20.97	o 143
20.98/21.00	o 142
20.98/21.02	o 141
20.98/21.05	o 140
20.98/21.07	o 139
20.98/21.09	o 138
21.09/21.12	o 137
21.09/21.14	o 136
21.09/21.17	o 135
21.09/21.19	o 134
21.19/21.21	o 133
21.19/21.24	o 132
21.19/21.26	o 131
21.19/21.28	o 130
21.28/21.31	o 129
21.28/21.33	o 128
21.28/21.36	o 127
21.28/21.38	o 126
21.39/21.40	o 125
21.39/21.43	o 124
21.39/21.45	o 123
21.39/21.48	o 122
21.49/21.50	o 121
21.49/21.52	o 120
21.49/21.55	o 119
21.49/21.57	o 118
21.59/21.60	o 117
21.59/21.62	o 116
21.59/21.65	o 115
21.59/21.67	o 114
21.59/21.69	o 113
21.69/21.72	o 112
21.69/21.74	o 111
21.69/21.77	o 110
21.69/21.79	o 109
21.79/21.81	o 108
21.79/21.84	o 107
21.79/21.86	o 106
21.79/21.89	o 105
21.89/21.91	o 104
21.89/21.93	o 103
21.89/21.96	o 102
21.89/21.98	o 101
21.99/22.01	o 100
21.99/22.03	o 99
21.99/22.06	o 98
21.99/22.08	o 97
22.08/22.11	o 96
22.19/22.20	o 95
22.19/22.24	o 94
22.19/22.27	o 93
22.29/22.34	o 92
24.49/24.55	o 91
24.99/25.01	o 90
24.99/25.09	o 89
25.29/25.33	o 88
25.58/25.65	o 87
25.68/25.71	o 86
27.89/27.94	o 85
27.98/28.03	o 84
31.68/31.74	o 83
31.98/32.03	o 82
32.19/32.22	o 81
37.48/37.54	o 80
42.08/42.14	o 79
46.98/47.09	o 78
249.43/249.55	o 77
389.90/390.04	o 76
821.10/821.31	o 75
882.07/882.37	o 74
1218.10/1218.49	o 73
1422.95/1423.38	o 72
1800.07/1800.50	s SATISFIABLE

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355214-1176784051/instance-355214-1176784051.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node50/watcher-355214-1176784051 -o ROOT/results/node50/solver-355214-1176784051 -C 1800 -W 3600 -M 1800 --output-limit 1,15 /tmp/evaluation/355214-1176784051/PBS4 /tmp/evaluation/355214-1176784051/instance-355214-1176784051.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 31801
/proc/meminfo: memFree=1521136/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=3716 CPUtime=0
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 490 0 0 0 0 0 0 0 18 0 1 0 33250339 3805184 473 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134572872 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 929 477 81 219 0 706 0

[startup+0.00752512 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 31801
/proc/meminfo: memFree=1521136/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=3848 CPUtime=0
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 752 0 0 0 0 0 0 0 18 0 1 0 33250339 3940352 734 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135006597 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 962 736 81 219 0 739 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 3848

[startup+0.101532 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 31801
/proc/meminfo: memFree=1521136/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=6188 CPUtime=0.09
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 1472 0 0 0 9 0 0 0 18 0 1 0 33250339 6336512 1356 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134805263 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 1547 1356 88 219 0 1324 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 6188

[startup+0.30155 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 31801
/proc/meminfo: memFree=1521136/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=7868 CPUtime=0.29
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 1885 0 0 0 29 0 0 0 19 0 1 0 33250339 8056832 1623 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134518124 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 1967 1623 89 219 0 1744 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 7868

[startup+0.701585 s]
/proc/loadavg: 1.00 1.00 1.00 3/64 31801
/proc/meminfo: memFree=1521136/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=10320 CPUtime=0.69
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 2690 0 0 0 68 1 0 0 22 0 1 0 33250339 10567680 2235 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135022916 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 2580 2235 89 219 0 2357 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 10320

[startup+1.50166 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1510952/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=14432 CPUtime=1.49
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 4114 0 0 0 148 1 0 0 25 0 1 0 33250339 14778368 3274 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134530219 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 3608 3274 89 219 0 3385 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 14432

[startup+3.1018 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1505128/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=23580 CPUtime=3.09
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 7118 0 0 0 306 3 0 0 25 0 1 0 33250339 24145920 5509 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134529775 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 5895 5509 89 219 0 5672 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 23580

[startup+6.30108 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1488424/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=40204 CPUtime=6.29
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 12663 0 0 0 623 6 0 0 25 0 1 0 33250339 41168896 9517 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 10051 9517 89 219 0 9828 0
Current children cumulated CPU time (s) 6.29
Current children cumulated vsize (KiB) 40204

[startup+12.7016 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1452408/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=76372 CPUtime=12.69
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 24510 0 0 0 1256 13 0 0 25 0 1 0 33250339 78204928 18291 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135057389 0 0 4096 0 0 0 0 17 1 0 0
/proc/31801/statm: 19093 18291 89 219 0 18870 0
Current children cumulated CPU time (s) 12.69
Current children cumulated vsize (KiB) 76372

[startup+25.5018 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1411768/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=140400 CPUtime=25.49
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 40014 0 0 0 2512 37 0 0 25 0 1 0 33250339 143769600 27600 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 35100 27600 104 219 0 34877 0
Current children cumulated CPU time (s) 25.49
Current children cumulated vsize (KiB) 140400

[startup+51.101 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1406776/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=142016 CPUtime=51.08
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 41300 0 0 0 5049 59 0 0 25 0 1 0 33250339 145424384 28886 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 35504 28886 104 219 0 35281 0
Current children cumulated CPU time (s) 51.08
Current children cumulated vsize (KiB) 142016

[startup+102.305 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1401400/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=143644 CPUtime=102.27
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 43107 0 0 0 10111 116 0 0 25 0 1 0 33250339 147091456 30143 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 35911 30143 104 219 0 35688 0
Current children cumulated CPU time (s) 102.27
Current children cumulated vsize (KiB) 143644

[startup+162.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1398456/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=145012 CPUtime=162.25
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 44424 0 0 0 16041 184 0 0 25 0 1 0 33250339 148492288 30910 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134550926 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 36253 30910 104 219 0 36030 0
Current children cumulated CPU time (s) 162.25
Current children cumulated vsize (KiB) 145012

[startup+222.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1395256/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=146036 CPUtime=222.23
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 45714 0 0 0 21979 244 0 0 25 0 1 0 33250339 149540864 31700 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 36509 31700 104 219 0 36286 0
Current children cumulated CPU time (s) 222.23
Current children cumulated vsize (KiB) 146036

[startup+282.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1393784/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=146448 CPUtime=282.22
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 46597 0 0 0 27917 305 0 0 25 0 1 0 33250339 149962752 32083 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 36612 32083 104 219 0 36389 0
Current children cumulated CPU time (s) 282.22
Current children cumulated vsize (KiB) 146448

[startup+342.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1389176/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=147012 CPUtime=342.2
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 48184 0 0 0 33862 358 0 0 25 0 1 0 33250339 150540288 33220 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 36753 33220 104 219 0 36530 0
Current children cumulated CPU time (s) 342.2
Current children cumulated vsize (KiB) 147012

[startup+402.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1388536/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=147608 CPUtime=402.19
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 48785 0 0 0 39810 409 0 0 25 0 1 0 33250339 151150592 33371 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 36902 33371 104 219 0 36679 0
Current children cumulated CPU time (s) 402.19
Current children cumulated vsize (KiB) 147608

[startup+462.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1386936/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=148096 CPUtime=462.18
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 49705 0 0 0 45761 457 0 0 25 0 1 0 33250339 151650304 33791 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134548393 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 37024 33791 104 219 0 36801 0
Current children cumulated CPU time (s) 462.18
Current children cumulated vsize (KiB) 148096

[startup+522.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1383736/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=213744 CPUtime=522.17
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 50867 0 0 0 51711 506 0 0 25 0 1 0 33250339 218873856 34553 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 53436 34553 104 219 0 53213 0
Current children cumulated CPU time (s) 522.17
Current children cumulated vsize (KiB) 213744

[startup+582.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1382584/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=214216 CPUtime=582.15
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 51654 0 0 0 57669 546 0 0 25 0 1 0 33250339 219357184 34840 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 53554 34840 104 219 0 53331 0
Current children cumulated CPU time (s) 582.15
Current children cumulated vsize (KiB) 214216

[startup+642.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1377976/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=214328 CPUtime=642.14
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 53196 0 0 0 63626 588 0 0 25 0 1 0 33250339 219471872 36032 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 53582 36032 104 219 0 53359 0
Current children cumulated CPU time (s) 642.14
Current children cumulated vsize (KiB) 214328


################
# More data... #
################

[startup+882.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1372152/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=215476 CPUtime=882.07
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 56042 0 0 0 87475 732 0 0 25 0 1 0 33250339 220647424 37428 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 53869 37428 104 219 0 53646 0
Current children cumulated CPU time (s) 882.07
Current children cumulated vsize (KiB) 215476

[startup+942.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1369336/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=215620 CPUtime=942.07
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 57041 0 0 0 93439 768 0 0 25 0 1 0 33250339 220794880 38127 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 53905 38127 104 219 0 53682 0
Current children cumulated CPU time (s) 942.07
Current children cumulated vsize (KiB) 215620

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1366136/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=215864 CPUtime=1002.05
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 58135 0 0 0 99402 803 0 0 25 0 1 0 33250339 221044736 38921 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 53966 38921 104 219 0 53743 0
Current children cumulated CPU time (s) 1002.05
Current children cumulated vsize (KiB) 215864

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1362808/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=216128 CPUtime=1062.03
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 59392 0 0 0 105365 838 0 0 25 0 1 0 33250339 221315072 39828 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547089 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54032 39828 104 219 0 53809 0
Current children cumulated CPU time (s) 1062.03
Current children cumulated vsize (KiB) 216128

[startup+1122.3 s]
/proc/loadavg: 1.06 1.02 1.00 2/65 31802
/proc/meminfo: memFree=1360440/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=216816 CPUtime=1122.02
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 60275 0 0 0 111330 872 0 0 25 0 1 0 33250339 222019584 40361 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54204 40361 104 219 0 53981 0
Current children cumulated CPU time (s) 1122.02
Current children cumulated vsize (KiB) 216816

[startup+1182.3 s]
/proc/loadavg: 1.02 1.01 1.00 2/65 31802
/proc/meminfo: memFree=1360120/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=216816 CPUtime=1182.01
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 60696 0 0 0 117300 901 0 0 25 0 1 0 33250339 222019584 40432 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54204 40432 104 219 0 53981 0
Current children cumulated CPU time (s) 1182.01
Current children cumulated vsize (KiB) 216816

[startup+1242.3 s]
/proc/loadavg: 1.01 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1359672/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=216960 CPUtime=1241.99
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 61182 0 0 0 123269 930 0 0 25 0 1 0 33250339 222167040 40518 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54240 40518 104 219 0 54017 0
Current children cumulated CPU time (s) 1241.99
Current children cumulated vsize (KiB) 216960

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1359480/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=217068 CPUtime=1301.99
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 61529 0 0 0 129241 958 0 0 25 0 1 0 33250339 222277632 40565 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54267 40565 104 219 0 54044 0
Current children cumulated CPU time (s) 1301.99
Current children cumulated vsize (KiB) 217068

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1357304/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=217496 CPUtime=1361.97
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 62431 0 0 0 135206 991 0 0 25 0 1 0 33250339 222715904 41117 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547089 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54374 41117 104 219 0 54151 0
Current children cumulated CPU time (s) 1361.97
Current children cumulated vsize (KiB) 217496

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1356984/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=217632 CPUtime=1421.95
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 62906 0 0 0 141176 1019 0 0 25 0 1 0 33250339 222855168 41192 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54408 41192 104 219 0 54185 0
Current children cumulated CPU time (s) 1421.95
Current children cumulated vsize (KiB) 217632

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1356600/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=217956 CPUtime=1481.93
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 63447 0 0 0 147149 1044 0 0 25 0 1 0 33250339 223186944 41283 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54489 41283 104 219 0 54266 0
Current children cumulated CPU time (s) 1481.93
Current children cumulated vsize (KiB) 217956

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1356280/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=217956 CPUtime=1541.92
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 63923 0 0 0 153122 1070 0 0 25 0 1 0 33250339 223186944 41359 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547517 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54489 41359 104 219 0 54266 0
Current children cumulated CPU time (s) 1541.92
Current children cumulated vsize (KiB) 217956

[startup+1602.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1356024/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=218068 CPUtime=1601.91
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 64339 0 0 0 159098 1093 0 0 25 0 1 0 33250339 223301632 41425 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54517 41425 104 219 0 54294 0
Current children cumulated CPU time (s) 1601.91
Current children cumulated vsize (KiB) 218068

[startup+1662.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1355768/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=218180 CPUtime=1661.89
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 64689 0 0 0 165073 1116 0 0 25 0 1 0 33250339 223416320 41475 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54545 41475 104 219 0 54322 0
Current children cumulated CPU time (s) 1661.89
Current children cumulated vsize (KiB) 218180

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1351416/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=218312 CPUtime=1721.88
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 66076 0 0 0 171047 1141 0 0 25 0 1 0 33250339 223551488 42562 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134548770 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54578 42562 104 219 0 54355 0
Current children cumulated CPU time (s) 1721.88
Current children cumulated vsize (KiB) 218312

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1348088/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=218792 CPUtime=1781.86
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 67234 0 0 0 177018 1168 0 0 25 0 1 0 33250339 224043008 43420 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54698 43420 104 219 0 54475 0
Current children cumulated CPU time (s) 1781.86
Current children cumulated vsize (KiB) 218792



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.5 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1346424/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=218792 CPUtime=1800.07
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 67744 0 0 0 178831 1176 0 0 25 0 1 0 33250339 224043008 43830 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54698 43830 104 219 0 54475 0
Current children cumulated CPU time (s) 1800.07
Current children cumulated vsize (KiB) 218792

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1800.5 s]
/proc/loadavg: 1.00 1.00 1.00 2/65 31802
/proc/meminfo: memFree=1346424/2055920 swapFree=4183816/4192956
[pid=31801] ppid=31799 vsize=218792 CPUtime=1800.07
/proc/31801/stat : 31801 (PBS4) R 31799 31801 28962 0 -1 4194304 67744 0 0 0 178831 1176 0 0 25 0 1 0 33250339 224043008 43830 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590670 0 0 4096 16384 0 0 0 17 1 0 0
/proc/31801/statm: 54698 43830 104 219 0 54475 0
Current children cumulated CPU time (s) 1800.07
Current children cumulated vsize (KiB) 218792

Child status: 0
Real time (s): 1800.54
CPU time (s): 1800.1
CPU user time (s): 1788.31
CPU system time (s): 11.7892
CPU usage (%): 99.9758
Max. virtual memory (cumulated for all children) (KiB): 218792

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1788.31
system time used= 11.7892
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 67745
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 9
involuntary context switches= 3076

runsolver used 1.17282 second user time and 3.76443 second system time

The end

Launcher Data (download as text)

Begin job on node50 on Tue Apr 17 04:27:32 UTC 2007

IDJOB= 355214
IDBENCH= 2954
IDSOLVER= 157
FILE ID= node50/355214-1176784051

PBS_JOBID= 4580811

Free space on /tmp= 66494 MiB

SOLVER NAME= PBS4 2007-03-23
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.12.opb
COMMAND LINE= /tmp/evaluation/355214-1176784051/PBS4 /tmp/evaluation/355214-1176784051/instance-355214-1176784051.opb            
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node50/convwatcher-355214-1176784051 -o ROOT/results/node50/conversion-355214-1176784051 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355214-1176784051/instance-355214-1176784051.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node50/watcher-355214-1176784051 -o ROOT/results/node50/solver-355214-1176784051 -C 1800 -W 3600 -M 1800 --output-limit 1,15  /tmp/evaluation/355214-1176784051/PBS4 /tmp/evaluation/355214-1176784051/instance-355214-1176784051.opb            

META MD5SUM SOLVER= b6c24e28fef9e1efa7891be58ea9e46f
MD5SUM BENCH=  b1eab2cf935e923f8f1ff9f24be23d02

RANDOM SEED= 747464686

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node50.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.232
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.232
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1521544 kB
Buffers:         31360 kB
Cached:         423892 kB
SwapCached:       3272 kB
Active:         175388 kB
Inactive:       292124 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1521544 kB
SwapTotal:     4192956 kB
SwapFree:      4183816 kB
Dirty:           56364 kB
Writeback:           0 kB
Mapped:          18048 kB
Slab:            52800 kB
Committed_AS:   999228 kB
PageTables:       1464 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66494 MiB

End job on node50 on Tue Apr 17 04:57:34 UTC 2007