Trace number 355201

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS4 2007-03-23No Cert. 1800.09 1800.64

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.07.opb
MD5SUM7a51facc2b0ceeb02915874508a30079
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark37
Best CPU time to get the best result obtained on this benchmark99.9348
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 37
Optimality of the best value was proved YES
Number of variables21756
Total number of constraints1266468
Number of constraints which are clauses1262688
Number of constraints which are cardinality constraints (but not clauses)3780
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint168
Number of terms in the objective function 168
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 168
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 166
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 334
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Quality of the solution as a function of time


Download the above graph as a PDF file / as an EPS file

Solver Data (download as text)

0.00/0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00/0.00	c Solving /tmp/evaluation/355201-1176781330/instance-355201-1176781330.opb ......
16.09/16.12	c done parsing opb.
16.09/16.12	o 168
16.09/16.14	o 167
16.09/16.16	o 166
16.09/16.18	o 165
16.09/16.20	o 164
16.19/16.21	o 163
16.19/16.23	o 162
16.19/16.25	o 161
16.19/16.27	o 160
16.19/16.29	o 159
16.29/16.31	o 158
16.29/16.33	o 157
16.29/16.35	o 156
16.29/16.37	o 155
16.29/16.39	o 154
16.39/16.41	o 153
16.39/16.43	o 152
16.39/16.45	o 151
16.39/16.47	o 150
16.39/16.49	o 149
16.49/16.51	o 148
16.49/16.53	o 147
16.49/16.55	o 146
16.49/16.57	o 145
16.49/16.59	o 144
16.58/16.61	o 143
16.58/16.62	o 142
16.58/16.64	o 141
16.58/16.66	o 140
16.58/16.68	o 139
16.68/16.70	o 138
16.68/16.72	o 137
16.68/16.74	o 136
16.68/16.76	o 135
16.68/16.78	o 134
16.79/16.80	o 133
16.79/16.82	o 132
16.79/16.84	o 131
16.79/16.86	o 130
16.79/16.88	o 129
16.89/16.90	o 128
16.89/16.92	o 127
16.89/16.94	o 126
16.89/16.96	o 125
16.89/16.98	o 124
16.99/17.00	o 123
16.99/17.02	o 122
16.99/17.04	o 121
16.99/17.06	o 120
16.99/17.08	o 119
17.08/17.10	o 118
17.08/17.12	o 117
17.08/17.14	o 116
17.08/17.16	o 115
17.08/17.18	o 114
17.08/17.20	o 113
17.19/17.21	o 112
17.19/17.23	o 111
17.19/17.25	o 110
17.19/17.27	o 109
17.19/17.29	o 108
17.29/17.31	o 107
17.29/17.33	o 106
17.29/17.35	o 105
17.29/17.37	o 104
17.29/17.39	o 103
17.39/17.41	o 102
17.39/17.43	o 101
17.39/17.45	o 100
17.39/17.47	o 99
17.39/17.49	o 98
17.49/17.51	o 97
17.49/17.53	o 96
17.49/17.55	o 95
17.49/17.57	o 94
17.49/17.59	o 93
17.59/17.61	o 92
17.59/17.63	o 91
17.59/17.65	o 90
17.59/17.67	o 89
19.39/19.43	o 88
19.49/19.60	o 87
19.79/19.82	o 86
20.09/20.12	o 85
20.09/20.18	o 84
20.29/20.31	o 83
20.59/20.62	o 82
20.68/20.80	o 81
20.79/20.84	o 80
21.28/21.34	o 79
22.29/22.34	o 78
22.29/22.39	o 77
28.28/28.31	o 76
29.68/29.79	o 75
29.78/29.85	o 74
57.68/57.73	o 73
146.46/146.51	o 72
341.01/341.15	o 71
341.60/341.76	o 70
522.06/522.23	o 69
717.11/717.38	o 68
1800.05/1800.61	s SATISFIABLE

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355201-1176781330/instance-355201-1176781330.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node45/watcher-355201-1176781330 -o ROOT/results/node45/solver-355201-1176781330 -C 1800 -W 3600 -M 1800 --output-limit 1,15 /tmp/evaluation/355201-1176781330/PBS4 /tmp/evaluation/355201-1176781330/instance-355201-1176781330.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.93 1.00 0.99 3/77 12418
/proc/meminfo: memFree=1782536/2055920 swapFree=4134620/4192956
[pid=12418] ppid=12416 vsize=3364 CPUtime=0
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 509 0 0 0 0 0 0 0 18 0 1 0 32978648 3444736 491 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134572872 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 841 494 81 219 0 618 0

[startup+0.0838371 s]
/proc/loadavg: 0.93 1.00 0.99 3/77 12418
/proc/meminfo: memFree=1782536/2055920 swapFree=4134620/4192956
[pid=12418] ppid=12416 vsize=5680 CPUtime=0.08
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 1308 0 0 0 8 0 0 0 18 0 1 0 32978648 5816320 1192 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134596339 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 1420 1192 88 219 0 1197 0
Current children cumulated CPU time (s) 0.08
Current children cumulated vsize (KiB) 5680

[startup+0.102837 s]
/proc/loadavg: 0.93 1.00 0.99 3/77 12418
/proc/meminfo: memFree=1782536/2055920 swapFree=4134620/4192956
[pid=12418] ppid=12416 vsize=5804 CPUtime=0.09
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 1360 0 0 0 9 0 0 0 18 0 1 0 32978648 5943296 1234 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134596339 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 1451 1234 88 219 0 1228 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 5804

[startup+0.302859 s]
/proc/loadavg: 0.93 1.00 0.99 3/77 12418
/proc/meminfo: memFree=1782536/2055920 swapFree=4134620/4192956
[pid=12418] ppid=12416 vsize=7300 CPUtime=0.29
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 1756 0 0 0 29 0 0 0 20 0 1 0 32978648 7475200 1484 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134784767 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 1825 1484 89 219 0 1602 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 7300

[startup+0.701905 s]
/proc/loadavg: 0.93 1.00 0.99 3/77 12418
/proc/meminfo: memFree=1782536/2055920 swapFree=4134620/4192956
[pid=12418] ppid=12416 vsize=9752 CPUtime=0.69
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 2556 0 0 0 69 0 0 0 23 0 1 0 32978648 9986048 2091 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134596339 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 2438 2091 89 219 0 2215 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 9752

[startup+1.50198 s]
/proc/loadavg: 0.93 1.00 0.99 2/78 12419
/proc/meminfo: memFree=1772864/2055920 swapFree=4134620/4192956
[pid=12418] ppid=12416 vsize=14044 CPUtime=1.49
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 3988 0 0 0 148 1 0 0 25 0 1 0 32978648 14381056 3138 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590705 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 3511 3138 89 219 0 3288 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 14044

[startup+3.10114 s]
/proc/loadavg: 0.93 1.00 0.99 2/78 12419
/proc/meminfo: memFree=1767040/2055920 swapFree=4134620/4192956
[pid=12418] ppid=12416 vsize=23060 CPUtime=3.09
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 7003 0 0 0 306 3 0 0 25 0 1 0 32978648 23613440 5384 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135057389 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 5765 5384 89 219 0 5542 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 23060

[startup+6.30147 s]
/proc/loadavg: 1.01 1.02 1.00 2/78 12419
/proc/meminfo: memFree=1750016/2055920 swapFree=4134744/4192956
[pid=12418] ppid=12416 vsize=39756 CPUtime=6.28
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 12612 0 0 0 621 7 0 0 25 0 1 0 32978648 40710144 9456 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134590705 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 9939 9456 89 219 0 9716 0
Current children cumulated CPU time (s) 6.28
Current children cumulated vsize (KiB) 39756

[startup+12.7011 s]
/proc/loadavg: 1.01 1.02 1.00 2/78 12419
/proc/meminfo: memFree=1713792/2055920 swapFree=4134744/4192956
[pid=12418] ppid=12416 vsize=75900 CPUtime=12.69
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 24486 0 0 0 1254 15 0 0 25 0 1 0 32978648 77721600 18257 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135006597 0 0 4096 0 0 0 0 17 1 0 0
/proc/12418/statm: 18975 18257 89 219 0 18752 0
Current children cumulated CPU time (s) 12.69
Current children cumulated vsize (KiB) 75900

[startup+25.5014 s]
/proc/loadavg: 1.01 1.02 1.00 2/78 12419
/proc/meminfo: memFree=1690304/2055920 swapFree=4134744/4192956
[pid=12418] ppid=12416 vsize=137760 CPUtime=25.48
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 35686 0 0 0 2509 39 0 0 25 0 1 0 32978648 141066240 23269 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 34440 23269 104 219 0 34217 0
Current children cumulated CPU time (s) 25.48
Current children cumulated vsize (KiB) 137760

[startup+51.102 s]
/proc/loadavg: 1.00 1.02 1.00 2/78 12419
/proc/meminfo: memFree=1684416/2055920 swapFree=4134744/4192956
[pid=12418] ppid=12416 vsize=139136 CPUtime=51.08
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 37369 0 0 0 5037 71 0 0 25 0 1 0 32978648 142475264 24780 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 34784 24780 104 219 0 34561 0
Current children cumulated CPU time (s) 51.08
Current children cumulated vsize (KiB) 139136

[startup+102.305 s]
/proc/loadavg: 1.00 1.01 1.00 2/78 12419
/proc/meminfo: memFree=1679936/2055920 swapFree=4134744/4192956
[pid=12418] ppid=12416 vsize=140660 CPUtime=102.27
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 39049 0 0 0 10098 129 0 0 25 0 1 0 32978648 144035840 25858 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547145 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 35165 25858 104 219 0 34942 0
Current children cumulated CPU time (s) 102.27
Current children cumulated vsize (KiB) 140660

[startup+162.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1675968/2055920 swapFree=4134744/4192956
[pid=12418] ppid=12416 vsize=141448 CPUtime=162.24
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 40754 0 0 0 16035 189 0 0 25 0 1 0 32978648 144842752 26789 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 35362 26789 104 219 0 35139 0
Current children cumulated CPU time (s) 162.24
Current children cumulated vsize (KiB) 141448

[startup+222.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1671552/2055920 swapFree=4134744/4192956
[pid=12418] ppid=12416 vsize=142020 CPUtime=222.23
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 42394 0 0 0 21980 243 0 0 25 0 1 0 32978648 145428480 27870 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 35505 27870 104 219 0 35282 0
Current children cumulated CPU time (s) 222.23
Current children cumulated vsize (KiB) 142020

[startup+282.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1667136/2055920 swapFree=4134800/4192956
[pid=12418] ppid=12416 vsize=142644 CPUtime=282.22
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 44006 0 0 0 27925 297 0 0 25 0 1 0 32978648 146067456 28966 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 35661 28966 104 219 0 35438 0
Current children cumulated CPU time (s) 282.22
Current children cumulated vsize (KiB) 142644

[startup+342.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1666176/2055920 swapFree=4134800/4192956
[pid=12418] ppid=12416 vsize=142888 CPUtime=342.2
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 44736 0 0 0 33878 342 0 0 25 0 1 0 32978648 146317312 29223 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 35722 29223 104 219 0 35499 0
Current children cumulated CPU time (s) 342.2
Current children cumulated vsize (KiB) 142888

[startup+402.303 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1660736/2055920 swapFree=4134864/4192956
[pid=12418] ppid=12416 vsize=143536 CPUtime=402.19
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 46456 0 0 0 39835 384 0 0 25 0 1 0 32978648 146980864 30513 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 35884 30513 104 219 0 35661 0
Current children cumulated CPU time (s) 402.19
Current children cumulated vsize (KiB) 143536

[startup+462.303 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1660224/2055920 swapFree=4134920/4192956
[pid=12418] ppid=12416 vsize=143680 CPUtime=462.18
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 46947 0 0 0 45790 428 0 0 25 0 1 0 32978648 147128320 30617 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 35920 30617 104 219 0 35697 0
Current children cumulated CPU time (s) 462.18
Current children cumulated vsize (KiB) 143680

[startup+522.303 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1659008/2055920 swapFree=4134920/4192956
[pid=12418] ppid=12416 vsize=144020 CPUtime=522.16
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 47737 0 0 0 51747 469 0 0 25 0 1 0 32978648 147476480 30977 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 36005 30977 104 219 0 35782 0
Current children cumulated CPU time (s) 522.16
Current children cumulated vsize (KiB) 144020

[startup+582.303 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1654016/2055920 swapFree=4134920/4192956
[pid=12418] ppid=12416 vsize=209924 CPUtime=582.14
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 49258 0 0 0 57706 508 0 0 25 0 1 0 32978648 214962176 32154 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547071 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 52481 32154 104 219 0 52258 0
Current children cumulated CPU time (s) 582.14
Current children cumulated vsize (KiB) 209924

[startup+642.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1653504/2055920 swapFree=4134976/4192956
[pid=12418] ppid=12416 vsize=210060 CPUtime=642.13
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 49736 0 0 0 63664 549 0 0 25 0 1 0 32978648 215101440 32245 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 52515 32245 104 219 0 52292 0
Current children cumulated CPU time (s) 642.13
Current children cumulated vsize (KiB) 210060


################
# More data... #
################

[startup+822.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1642112/2055920 swapFree=4135028/4192956
[pid=12418] ppid=12416 vsize=211336 CPUtime=822.08
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 53662 0 0 0 81553 655 0 0 25 0 1 0 32978648 216408064 35096 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 52834 35096 104 219 0 52611 0
Current children cumulated CPU time (s) 822.08
Current children cumulated vsize (KiB) 211336

[startup+882.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1641280/2055920 swapFree=4135028/4192956
[pid=12418] ppid=12416 vsize=211472 CPUtime=882.07
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 54092 0 0 0 87517 690 0 0 25 0 1 0 32978648 216547328 35225 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 52868 35225 104 219 0 52645 0
Current children cumulated CPU time (s) 882.07
Current children cumulated vsize (KiB) 211472

[startup+942.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1640960/2055920 swapFree=4135088/4192956
[pid=12418] ppid=12416 vsize=211608 CPUtime=942.05
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 54504 0 0 0 93487 718 0 0 25 0 1 0 32978648 216686592 35293 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547123 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 52902 35293 104 219 0 52679 0
Current children cumulated CPU time (s) 942.05
Current children cumulated vsize (KiB) 211608

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1640448/2055920 swapFree=4135088/4192956
[pid=12418] ppid=12416 vsize=212004 CPUtime=1002.04
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 54970 0 0 0 99456 748 0 0 25 0 1 0 32978648 217092096 35415 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53001 35415 104 219 0 52778 0
Current children cumulated CPU time (s) 1002.04
Current children cumulated vsize (KiB) 212004

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1640064/2055920 swapFree=4135148/4192956
[pid=12418] ppid=12416 vsize=212004 CPUtime=1062.02
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 55393 0 0 0 105426 776 0 0 25 0 1 0 32978648 217092096 35494 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53001 35494 104 219 0 52778 0
Current children cumulated CPU time (s) 1062.02
Current children cumulated vsize (KiB) 212004

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12419
/proc/meminfo: memFree=1639616/2055920 swapFree=4135148/4192956
[pid=12418] ppid=12416 vsize=212124 CPUtime=1122.01
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 55867 0 0 0 111399 802 0 0 25 0 1 0 32978648 217214976 35581 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134586003 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53031 35581 104 219 0 52808 0
Current children cumulated CPU time (s) 1122.01
Current children cumulated vsize (KiB) 212124

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/84 12593
/proc/meminfo: memFree=1637840/2055920 swapFree=4135204/4192956
[pid=12418] ppid=12416 vsize=212544 CPUtime=1181.92
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 56191 0 0 0 117362 830 0 0 25 0 1 0 32978648 217645056 35647 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547145 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53136 35647 104 219 0 52913 0
Current children cumulated CPU time (s) 1181.92
Current children cumulated vsize (KiB) 212544

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12617
/proc/meminfo: memFree=1634752/2055920 swapFree=4135204/4192956
[pid=12418] ppid=12416 vsize=212676 CPUtime=1241.89
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 57585 0 0 0 123332 857 0 0 25 0 1 0 32978648 217780224 36740 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547089 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53169 36740 104 219 0 52946 0
Current children cumulated CPU time (s) 1241.89
Current children cumulated vsize (KiB) 212676

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12617
/proc/meminfo: memFree=1632832/2055920 swapFree=4135204/4192956
[pid=12418] ppid=12416 vsize=212988 CPUtime=1301.88
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 58378 0 0 0 129305 883 0 0 25 0 1 0 32978648 218099712 37146 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53247 37146 104 219 0 53024 0
Current children cumulated CPU time (s) 1301.88
Current children cumulated vsize (KiB) 212988

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12617
/proc/meminfo: memFree=1632512/2055920 swapFree=4135260/4192956
[pid=12418] ppid=12416 vsize=212988 CPUtime=1361.86
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 58799 0 0 0 135278 908 0 0 25 0 1 0 32978648 218099712 37223 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547371 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53247 37223 104 219 0 53024 0
Current children cumulated CPU time (s) 1361.86
Current children cumulated vsize (KiB) 212988

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12617
/proc/meminfo: memFree=1632128/2055920 swapFree=4135260/4192956
[pid=12418] ppid=12416 vsize=213116 CPUtime=1421.84
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 59222 0 0 0 141252 932 0 0 25 0 1 0 32978648 218230784 37302 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53279 37302 104 219 0 53056 0
Current children cumulated CPU time (s) 1421.84
Current children cumulated vsize (KiB) 213116

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12617
/proc/meminfo: memFree=1631872/2055920 swapFree=4135316/4192956
[pid=12418] ppid=12416 vsize=213116 CPUtime=1481.83
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 59569 0 0 0 147228 955 0 0 25 0 1 0 32978648 218230784 37348 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53279 37348 104 219 0 53056 0
Current children cumulated CPU time (s) 1481.83
Current children cumulated vsize (KiB) 213116

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12619
/proc/meminfo: memFree=1631296/2055920 swapFree=4135316/4192956
[pid=12418] ppid=12416 vsize=213576 CPUtime=1541.81
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 59982 0 0 0 153202 979 0 0 25 0 1 0 32978648 218701824 37460 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53394 37460 104 219 0 53171 0
Current children cumulated CPU time (s) 1541.81
Current children cumulated vsize (KiB) 213576

[startup+1602.3 s]
/proc/loadavg: 1.04 1.01 1.00 2/78 12619
/proc/meminfo: memFree=1630976/2055920 swapFree=4135316/4192956
[pid=12418] ppid=12416 vsize=213576 CPUtime=1601.8
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 60365 0 0 0 159177 1003 0 0 25 0 1 0 32978648 218701824 37542 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53394 37542 104 219 0 53171 0
Current children cumulated CPU time (s) 1601.8
Current children cumulated vsize (KiB) 213576

[startup+1662.3 s]
/proc/loadavg: 1.01 1.01 1.00 2/78 12619
/proc/meminfo: memFree=1630720/2055920 swapFree=4135376/4192956
[pid=12418] ppid=12416 vsize=213704 CPUtime=1661.78
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 60708 0 0 0 165154 1024 0 0 25 0 1 0 32978648 218832896 37584 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53426 37584 104 219 0 53203 0
Current children cumulated CPU time (s) 1661.78
Current children cumulated vsize (KiB) 213704

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12619
/proc/meminfo: memFree=1630144/2055920 swapFree=4135376/4192956
[pid=12418] ppid=12416 vsize=214056 CPUtime=1721.76
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 61109 0 0 0 171131 1045 0 0 25 0 1 0 32978648 219193344 37727 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 135059249 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53514 37727 104 219 0 53291 0
Current children cumulated CPU time (s) 1721.76
Current children cumulated vsize (KiB) 214056

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12619
/proc/meminfo: memFree=1629760/2055920 swapFree=4135440/4192956
[pid=12418] ppid=12416 vsize=214184 CPUtime=1781.75
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 61488 0 0 0 177108 1067 0 0 25 0 1 0 32978648 219324416 37805 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547142 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53546 37805 104 219 0 53323 0
Current children cumulated CPU time (s) 1781.75
Current children cumulated vsize (KiB) 214184



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.6 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 12619
/proc/meminfo: memFree=1629632/2055920 swapFree=4135440/4192956
[pid=12418] ppid=12416 vsize=214184 CPUtime=1800.05
/proc/12418/stat : 12418 (PBS4) R 12416 12418 11113 0 -1 4194304 61643 0 0 0 178932 1073 0 0 25 0 1 0 32978648 219324416 37831 18446744073709551615 134512640 135410514 4294956640 18446744073709551615 134547089 0 0 4096 16384 0 0 0 17 1 0 0
/proc/12418/statm: 53546 37831 104 219 0 53323 0
Current children cumulated CPU time (s) 1800.05
Current children cumulated vsize (KiB) 214184

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

Child status: 0
Real time (s): 1800.64
CPU time (s): 1800.09
CPU user time (s): 1789.33
CPU system time (s): 10.7604
CPU usage (%): 99.9697
Max. virtual memory (cumulated for all children) (KiB): 214184

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1789.33
system time used= 10.7604
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 61644
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 8
involuntary context switches= 36838

runsolver used 2.24066 second user time and 4.29435 second system time

The end

Launcher Data (download as text)

Begin job on node45 on Tue Apr 17 03:42:10 UTC 2007

IDJOB= 355201
IDBENCH= 2953
IDSOLVER= 157
FILE ID= node45/355201-1176781330

PBS_JOBID= 4580795

Free space on /tmp= 66452 MiB

SOLVER NAME= PBS4 2007-03-23
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.07.opb
COMMAND LINE= /tmp/evaluation/355201-1176781330/PBS4 /tmp/evaluation/355201-1176781330/instance-355201-1176781330.opb            
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node45/convwatcher-355201-1176781330 -o ROOT/results/node45/conversion-355201-1176781330 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355201-1176781330/instance-355201-1176781330.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node45/watcher-355201-1176781330 -o ROOT/results/node45/solver-355201-1176781330 -C 1800 -W 3600 -M 1800 --output-limit 1,15  /tmp/evaluation/355201-1176781330/PBS4 /tmp/evaluation/355201-1176781330/instance-355201-1176781330.opb            

META MD5SUM SOLVER= b6c24e28fef9e1efa7891be58ea9e46f
MD5SUM BENCH=  7a51facc2b0ceeb02915874508a30079

RANDOM SEED= 578915528

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node45.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.218
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.218
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1783008 kB
Buffers:         17824 kB
Cached:         167596 kB
SwapCached:      32316 kB
Active:         169144 kB
Inactive:        59820 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1783008 kB
SwapTotal:     4192956 kB
SwapFree:      4134620 kB
Dirty:           46024 kB
Writeback:           0 kB
Mapped:          32032 kB
Slab:            29576 kB
Committed_AS:  1082256 kB
PageTables:       1736 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66452 MiB

End job on node45 on Tue Apr 17 04:12:13 UTC 2007