Trace number 355197

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
glpPB 0.2? (TO) 1800.23 1801.63

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.11.opb
MD5SUM5f844d3fbd9d157e56bab6c09ee5f179
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark38
Best CPU time to get the best result obtained on this benchmark101.124
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 38
Optimality of the best value was proved YES
Number of variables21675
Total number of constraints1210400
Number of constraints which are clauses1206830
Number of constraints which are cardinality constraints (but not clauses)3570
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint170
Number of terms in the objective function 170
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 170
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 168
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 338
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00/0.02	c glpPB 0.2 (July 2006)
0.00/0.02	c An Application of GLPK 4.10 for PB Constraints
0.00/0.02	c Done @ University of Michigan, Ann Arbor, MI
0.00/0.02	c  by Hossein Sheini

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355197-1176780822/instance-355197-1176780822.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node20/watcher-355197-1176780822 -o ROOT/results/node20/solver-355197-1176780822 -C 1800 -W 3600 -M 1800 --output-limit 1,15 glpPBv3 /tmp/evaluation/355197-1176780822/instance-355197-1176780822.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.85 0.97 0.99 3/77 9569
/proc/meminfo: memFree=1865016/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=2432 CPUtime=0
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 147 0 1 0 0 0 0 0 18 0 1 0 125999682 2490368 128 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 7588728 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 608 128 109 40 0 11 0

[startup+0.0807711 s]
/proc/loadavg: 0.85 0.97 0.99 3/77 9569
/proc/meminfo: memFree=1865016/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=3980 CPUtime=0.05
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 603 0 4 0 5 0 0 0 18 0 1 0 125999682 4075520 577 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134526940 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 995 577 199 40 0 410 0
Current children cumulated CPU time (s) 0.05
Current children cumulated vsize (KiB) 3980

[startup+0.101775 s]
/proc/loadavg: 0.85 0.97 0.99 3/77 9569
/proc/meminfo: memFree=1865016/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=4248 CPUtime=0.07
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 666 0 4 0 7 0 0 0 18 0 1 0 125999682 4349952 640 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8085207 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 1062 640 199 40 0 477 0
Current children cumulated CPU time (s) 0.07
Current children cumulated vsize (KiB) 4248

[startup+0.301815 s]
/proc/loadavg: 0.85 0.97 0.99 3/77 9569
/proc/meminfo: memFree=1865016/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=6512 CPUtime=0.27
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1241 0 4 0 27 0 0 0 19 0 1 0 125999682 6668288 1215 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8054395 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 1628 1215 199 40 0 1043 0
Current children cumulated CPU time (s) 0.27
Current children cumulated vsize (KiB) 6512

[startup+0.701895 s]
/proc/loadavg: 0.85 0.97 0.99 3/77 9569
/proc/meminfo: memFree=1865016/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=11176 CPUtime=0.68
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 2386 0 4 0 67 1 0 0 23 0 1 0 125999682 11444224 2360 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8085207 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 2794 2360 199 40 0 2209 0
Current children cumulated CPU time (s) 0.68
Current children cumulated vsize (KiB) 11176

[startup+1.50106 s]
/proc/loadavg: 0.85 0.97 0.99 2/78 9570
/proc/meminfo: memFree=1852144/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=20100 CPUtime=1.47
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 4627 0 4 0 146 1 0 0 25 0 1 0 125999682 20582400 4601 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8085207 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 5025 4603 199 40 0 4440 0
Current children cumulated CPU time (s) 1.47
Current children cumulated vsize (KiB) 20100

[startup+3.10138 s]
/proc/loadavg: 0.85 0.97 0.99 2/78 9570
/proc/meminfo: memFree=1839792/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=37416 CPUtime=3.07
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 8966 0 4 0 303 4 0 0 25 0 1 0 125999682 38313984 8940 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8085207 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 9354 8940 199 40 0 8769 0
Current children cumulated CPU time (s) 3.07
Current children cumulated vsize (KiB) 37416

[startup+6.30302 s]
/proc/loadavg: 0.94 0.98 1.00 2/78 9570
/proc/meminfo: memFree=1805104/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=71520 CPUtime=6.28
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 17470 0 4 0 619 9 0 0 25 0 1 0 125999682 73236480 17444 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8079120 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 17880 17444 199 40 0 17295 0
Current children cumulated CPU time (s) 6.28
Current children cumulated vsize (KiB) 71520

[startup+12.7013 s]
/proc/loadavg: 0.95 0.98 1.00 2/78 9570
/proc/meminfo: memFree=1736752/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=137460 CPUtime=12.67
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 33986 0 4 0 1250 17 0 0 25 0 1 0 125999682 140759040 33960 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134521260 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 34398 33962 199 40 0 33813 0
Current children cumulated CPU time (s) 12.67
Current children cumulated vsize (KiB) 137460

[startup+25.5019 s]
/proc/loadavg: 0.96 0.98 1.00 2/78 9570
/proc/meminfo: memFree=1059824/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=806204 CPUtime=25.46
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 234037 0 4 0 2444 102 0 0 25 0 1 0 125999682 825552896 201150 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582424 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 201551 201150 221 40 0 200966 0
Current children cumulated CPU time (s) 25.46
Current children cumulated vsize (KiB) 806204

[startup+51.102 s]
/proc/loadavg: 0.97 0.98 1.00 2/78 9570
/proc/meminfo: memFree=988400/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=51.05
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 288428 0 4 0 4976 129 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587996 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 51.05
Current children cumulated vsize (KiB) 877132

[startup+102.306 s]
/proc/loadavg: 0.99 0.98 1.00 2/78 9570
/proc/meminfo: memFree=988272/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=102.21
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 326280 0 4 0 10074 147 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 102.21
Current children cumulated vsize (KiB) 877132

[startup+162.301 s]
/proc/loadavg: 0.99 0.98 1.00 2/78 9570
/proc/meminfo: memFree=988208/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=162.16
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 373595 0 4 0 16045 171 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134584745 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 162.16
Current children cumulated vsize (KiB) 877132

[startup+222.301 s]
/proc/loadavg: 0.99 0.98 1.00 2/78 9570
/proc/meminfo: memFree=988080/2055920 swapFree=4123436/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=222.12
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 420910 0 4 0 22018 194 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643687 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 222.12
Current children cumulated vsize (KiB) 877132

[startup+282.301 s]
/proc/loadavg: 0.99 0.98 1.00 2/78 9572
/proc/meminfo: memFree=984240/2055920 swapFree=4123536/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=282.07
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 468225 0 4 0 27989 218 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583590 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 282.07
Current children cumulated vsize (KiB) 877132

[startup+342.302 s]
/proc/loadavg: 0.99 0.98 1.00 3/78 9572
/proc/meminfo: memFree=984304/2055920 swapFree=4123536/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=342.03
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 515540 0 4 0 33962 241 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134607193 0 0 4096 0 0 0 0 17 1 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 342.03
Current children cumulated vsize (KiB) 877132

[startup+402.302 s]
/proc/loadavg: 0.99 0.98 1.00 2/78 9572
/proc/meminfo: memFree=984112/2055920 swapFree=4123536/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=401.97
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 562855 0 4 0 39932 265 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589633 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 401.97
Current children cumulated vsize (KiB) 877132

[startup+462.302 s]
/proc/loadavg: 1.04 1.00 1.00 2/78 9572
/proc/meminfo: memFree=979440/2055920 swapFree=4123536/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=461.94
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 610170 0 4 0 45906 288 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587141 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 461.94
Current children cumulated vsize (KiB) 877132

[startup+522.302 s]
/proc/loadavg: 1.01 1.00 1.00 2/78 9572
/proc/meminfo: memFree=941808/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=521.9
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 657485 0 4 0 51880 310 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582408 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 521.9
Current children cumulated vsize (KiB) 877132

[startup+582.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=979440/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=581.85
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 695337 0 4 0 57856 329 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643347 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 581.85
Current children cumulated vsize (KiB) 877132

[startup+642.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=979376/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=641.83
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 742652 0 4 0 63831 352 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583744 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 641.83
Current children cumulated vsize (KiB) 877132


################
# More data... #
################

[startup+882.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978992/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=881.66
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 922449 0 4 0 87724 442 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643172 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 881.66
Current children cumulated vsize (KiB) 877132

[startup+942.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978928/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=941.61
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 960301 0 4 0 93700 461 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583873 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 941.61
Current children cumulated vsize (KiB) 877132

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978864/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1001.57
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1007616 0 4 0 99673 484 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581813 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1001.57
Current children cumulated vsize (KiB) 877132

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978736/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1061.54
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1045468 0 4 0 105652 502 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582424 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1061.54
Current children cumulated vsize (KiB) 877132

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978544/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1121.48
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1092783 0 4 0 111623 525 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583887 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1121.48
Current children cumulated vsize (KiB) 877132

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978608/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1181.41
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1130635 0 4 0 117597 544 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587159 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1181.41
Current children cumulated vsize (KiB) 877132

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978416/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1241.36
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1177950 0 4 0 123568 568 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643580 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1241.36
Current children cumulated vsize (KiB) 877132

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=940592/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=914984 CPUtime=1301.32
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1225265 0 4 0 129542 590 0 0 25 0 1 0 125999682 936943616 228345 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639234 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 228746 228345 221 40 0 228161 0
Current children cumulated CPU time (s) 1301.32
Current children cumulated vsize (KiB) 914984

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978160/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1361.27
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1263117 0 4 0 135518 609 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1361.27
Current children cumulated vsize (KiB) 877132

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=977968/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1421.22
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1310432 0 4 0 141489 633 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583723 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1421.22
Current children cumulated vsize (KiB) 877132

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=978032/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1481.15
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1357747 0 4 0 147458 657 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581813 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1481.15
Current children cumulated vsize (KiB) 877132

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9572
/proc/meminfo: memFree=977840/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1541.08
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1395599 0 4 0 153432 676 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134607197 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1541.08
Current children cumulated vsize (KiB) 877132

[startup+1602.3 s]
/proc/loadavg: 1.03 1.01 1.00 2/78 9572
/proc/meminfo: memFree=977712/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1601.05
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1442914 0 4 0 159406 699 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582412 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1601.05
Current children cumulated vsize (KiB) 877132

[startup+1662.3 s]
/proc/loadavg: 1.01 1.01 1.00 2/84 9706
/proc/meminfo: memFree=975856/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1660.99
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1490229 0 4 0 165369 730 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643524 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1660.99
Current children cumulated vsize (KiB) 877132

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9770
/proc/meminfo: memFree=976816/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1720.94
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1528081 0 4 0 171338 756 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581956 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1720.94
Current children cumulated vsize (KiB) 877132

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9770
/proc/meminfo: memFree=976880/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1780.9
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1575396 0 4 0 177309 781 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1780.9
Current children cumulated vsize (KiB) 877132



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.5 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9770
/proc/meminfo: memFree=976944/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=877132 CPUtime=1800.09
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 0 1584859 0 4 0 179223 786 0 0 25 0 1 0 125999682 898183168 218882 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643626 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 219283 218882 221 40 0 218698 0
Current children cumulated CPU time (s) 1800.09
Current children cumulated vsize (KiB) 877132

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1801.61 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 9770
/proc/meminfo: memFree=976944/2055920 swapFree=4123540/4192956
[pid=9569] ppid=9567 vsize=0 CPUtime=1800.19
/proc/9569/stat : 9569 (glpPBv3) R 9567 9569 8264 0 -1 1028 1584859 0 4 0 179223 796 0 0 25 0 1 0 125999682 0 0 18446744073709551615 0 0 0 0 0 0 0 4096 0 0 0 0 17 0 0 0
/proc/9569/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 1800.19
Current children cumulated vsize (KiB) 0

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.63
CPU time (s): 1800.23
CPU user time (s): 1792.24
CPU system time (s): 7.99079
CPU usage (%): 99.922
Max. virtual memory (cumulated for all children) (KiB): 914984

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1792.24
system time used= 7.99078
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 1584859
page faults= 4
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 18
involuntary context switches= 35405

runsolver used 1.85472 second user time and 4.72228 second system time

The end

Launcher Data (download as text)

Begin job on node20 on Tue Apr 17 03:33:43 UTC 2007

IDJOB= 355197
IDBENCH= 2952
IDSOLVER= 166
FILE ID= node20/355197-1176780822

PBS_JOBID= 4580791

Free space on /tmp= 66462 MiB

SOLVER NAME= glpPB 0.2
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.11.opb
COMMAND LINE= glpPBv3 /tmp/evaluation/355197-1176780822/instance-355197-1176780822.opb
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node20/convwatcher-355197-1176780822 -o ROOT/results/node20/conversion-355197-1176780822 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355197-1176780822/instance-355197-1176780822.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node20/watcher-355197-1176780822 -o ROOT/results/node20/solver-355197-1176780822 -C 1800 -W 3600 -M 1800 --output-limit 1,15  glpPBv3 /tmp/evaluation/355197-1176780822/instance-355197-1176780822.opb

META MD5SUM SOLVER= 9ebec3e8d890fdeefad01654ad9b68b7
MD5SUM BENCH=  5f844d3fbd9d157e56bab6c09ee5f179

RANDOM SEED= 802241447

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node20.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.265
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.265
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1865424 kB
Buffers:          3188 kB
Cached:         136704 kB
SwapCached:      18888 kB
Active:          90312 kB
Inactive:        70336 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1865424 kB
SwapTotal:     4192956 kB
SwapFree:      4123436 kB
Dirty:           45324 kB
Writeback:           0 kB
Mapped:          24544 kB
Slab:            15424 kB
Committed_AS:  1808464 kB
PageTables:       1748 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66462 MiB

End job on node20 on Tue Apr 17 04:03:47 UTC 2007