Trace number 355184

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
glpPB 0.2? (TO) 1800.14 1800.76

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-unif-100_100.08.opb
MD5SUM7e2e59a69914c0aa8f6d18f073e252a7
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark34
Best CPU time to get the best result obtained on this benchmark106.055
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 34
Optimality of the best value was proved YES
Number of variables9457
Total number of constraints449183
Number of constraints which are clauses446880
Number of constraints which are cardinality constraints (but not clauses)2303
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint98
Number of terms in the objective function 98
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 98
Number of bits of the sum of numbers in the objective function 7
Biggest number in a constraint 96
Number of bits of the biggest number in a constraint 7
Biggest sum of numbers in a constraint 194
Number of bits of the biggest sum of numbers8
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00/0.01	c glpPB 0.2 (July 2006)
0.00/0.01	c An Application of GLPK 4.10 for PB Constraints
0.00/0.01	c Done @ University of Michigan, Ann Arbor, MI
0.00/0.01	c  by Hossein Sheini

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355184-1176779436/instance-355184-1176779436.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node42/watcher-355184-1176779436 -o ROOT/results/node42/solver-355184-1176779436 -C 1800 -W 3600 -M 1800 --output-limit 1,15 glpPBv3 /tmp/evaluation/355184-1176779436/instance-355184-1176779436.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 20943
/proc/meminfo: memFree=1735216/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=2384 CPUtime=0
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 170 0 3 0 0 0 0 0 18 0 1 0 125855519 2441216 143 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 4160564816 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 596 152 130 40 0 11 0

[startup+0.0470939 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 20943
/proc/meminfo: memFree=1735216/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=3448 CPUtime=0.03
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 471 0 3 0 3 0 0 0 18 0 1 0 125855519 3530752 444 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 12873431 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 862 444 199 40 0 277 0
Current children cumulated CPU time (s) 0.03
Current children cumulated vsize (KiB) 3448

[startup+0.101102 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 20943
/proc/meminfo: memFree=1735216/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=4116 CPUtime=0.08
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 627 0 3 0 8 0 0 0 18 0 1 0 125855519 4214784 600 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 12873431 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 1029 600 199 40 0 444 0
Current children cumulated CPU time (s) 0.08
Current children cumulated vsize (KiB) 4116

[startup+0.30114 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 20943
/proc/meminfo: memFree=1735216/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=6380 CPUtime=0.28
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1188 0 3 0 28 0 0 0 19 0 1 0 125855519 6533120 1161 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 12873431 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 1595 1163 199 40 0 1010 0
Current children cumulated CPU time (s) 0.28
Current children cumulated vsize (KiB) 6380

[startup+0.701216 s]
/proc/loadavg: 1.00 1.00 1.00 3/77 20943
/proc/meminfo: memFree=1735216/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=10776 CPUtime=0.68
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 2300 0 3 0 67 1 0 0 23 0 1 0 125855519 11034624 2273 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 12873431 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 2694 2273 199 40 0 2109 0
Current children cumulated CPU time (s) 0.68
Current children cumulated vsize (KiB) 10776

[startup+1.50137 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1722792/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=19432 CPUtime=1.48
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 4481 0 3 0 147 1 0 0 25 0 1 0 125855519 19898368 4454 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 12873431 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 4858 4454 199 40 0 4273 0
Current children cumulated CPU time (s) 1.48
Current children cumulated vsize (KiB) 19432

[startup+3.10168 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1710952/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=36216 CPUtime=3.08
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 8649 0 3 0 304 4 0 0 25 0 1 0 125855519 37085184 8622 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 12873431 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 9054 8622 199 40 0 8469 0
Current children cumulated CPU time (s) 3.08
Current children cumulated vsize (KiB) 36216

[startup+6.30128 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1677112/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=140316 CPUtime=6.28
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 36209 0 3 0 610 18 0 0 25 0 1 0 125855519 143683584 34650 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134536854 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 35079 34650 201 40 0 34494 0
Current children cumulated CPU time (s) 6.28
Current children cumulated vsize (KiB) 140316

[startup+12.7015 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1433528/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=343160 CPUtime=12.68
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 104575 0 3 0 1218 50 0 0 25 0 1 0 125855519 351395840 85395 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639282 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 85790 85395 221 40 0 85205 0
Current children cumulated CPU time (s) 12.68
Current children cumulated vsize (KiB) 343160

[startup+25.5019 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1407032/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=25.48
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 111599 0 3 0 2494 54 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643684 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 25.48
Current children cumulated vsize (KiB) 329112

[startup+51.1018 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1407096/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=343160 CPUtime=51.06
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 132671 0 3 0 5042 64 0 0 25 0 1 0 125855519 351395840 85395 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134636812 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 85790 85395 221 40 0 85205 0
Current children cumulated CPU time (s) 51.06
Current children cumulated vsize (KiB) 343160

[startup+102.306 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1407096/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=102.25
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 171303 0 3 0 10140 85 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643580 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 102.25
Current children cumulated vsize (KiB) 329112

[startup+162.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1407032/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=162.23
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 216959 0 3 0 16115 108 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582412 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 162.23
Current children cumulated vsize (KiB) 329112

[startup+222.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1393144/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=343160 CPUtime=222.21
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 262615 0 3 0 22089 132 0 0 25 0 1 0 125855519 351395840 85395 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134515496 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 85790 85395 221 40 0 85205 0
Current children cumulated CPU time (s) 222.21
Current children cumulated vsize (KiB) 343160

[startup+282.303 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1393080/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=282.18
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 304759 0 3 0 28064 154 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 282.18
Current children cumulated vsize (KiB) 329112

[startup+342.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1393016/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=343160 CPUtime=342.16
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 350415 0 3 0 34038 178 0 0 25 0 1 0 125855519 351395840 85395 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639282 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 85790 85395 221 40 0 85205 0
Current children cumulated CPU time (s) 342.16
Current children cumulated vsize (KiB) 343160

[startup+402.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1406776/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=402.15
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 389047 0 3 0 40016 199 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643256 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 402.15
Current children cumulated vsize (KiB) 329112

[startup+462.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1406648/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=462.12
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 431191 0 3 0 45991 221 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583590 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 462.12
Current children cumulated vsize (KiB) 329112

[startup+522.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1406584/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=522.1
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 473335 0 3 0 51967 243 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643172 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 522.1
Current children cumulated vsize (KiB) 329112

[startup+582.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1406520/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=582.08
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 515479 0 3 0 57943 265 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643678 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 582.08
Current children cumulated vsize (KiB) 329112

[startup+642.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1406392/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=642.06
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 557623 0 3 0 63919 287 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134590206 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 642.06
Current children cumulated vsize (KiB) 329112


################
# More data... #
################

[startup+882.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1406136/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=881.98
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 715663 0 3 0 87827 371 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589969 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 881.98
Current children cumulated vsize (KiB) 329112

[startup+942.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1392248/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=941.96
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 754295 0 3 0 93805 391 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 941.96
Current children cumulated vsize (KiB) 329112

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1406008/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1001.94
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 789415 0 3 0 99785 409 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581956 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1001.94
Current children cumulated vsize (KiB) 329112

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405944/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1061.92
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 824535 0 3 0 105765 427 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643284 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1061.92
Current children cumulated vsize (KiB) 329112

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405880/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1121.9
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 859655 0 3 0 111745 445 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583693 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1121.9
Current children cumulated vsize (KiB) 329112

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405752/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1181.88
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 894775 0 3 0 117725 463 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134605662 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1181.88
Current children cumulated vsize (KiB) 329112

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405560/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1241.86
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 926383 0 3 0 123706 480 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643560 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1241.86
Current children cumulated vsize (KiB) 329112

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405496/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1301.84
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 961503 0 3 0 129686 498 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1301.84
Current children cumulated vsize (KiB) 329112

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405432/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1361.82
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 993111 0 3 0 135667 515 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134584095 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1361.82
Current children cumulated vsize (KiB) 329112

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405432/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1421.8
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1028231 0 3 0 141647 533 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583859 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1421.8
Current children cumulated vsize (KiB) 329112

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405368/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1481.78
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1059839 0 3 0 147628 550 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643614 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1481.78
Current children cumulated vsize (KiB) 329112

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1405112/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1541.75
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1091447 0 3 0 153609 566 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1541.75
Current children cumulated vsize (KiB) 329112

[startup+1602.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1404984/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1601.73
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1126567 0 3 0 159588 585 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643694 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1601.73
Current children cumulated vsize (KiB) 329112

[startup+1662.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20944
/proc/meminfo: memFree=1404984/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1661.71
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1158175 0 3 0 165569 602 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643620 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1661.71
Current children cumulated vsize (KiB) 329112

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20946
/proc/meminfo: memFree=1404728/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1721.7
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1189783 0 3 0 171551 619 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643631 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1721.7
Current children cumulated vsize (KiB) 329112

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20946
/proc/meminfo: memFree=1404728/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=343160 CPUtime=1781.67
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1224903 0 3 0 177530 637 0 0 25 0 1 0 125855519 351395840 85395 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134636104 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 85790 85395 221 40 0 85205 0
Current children cumulated CPU time (s) 1781.67
Current children cumulated vsize (KiB) 343160



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.71 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20946
/proc/meminfo: memFree=1404728/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1800.07
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1231927 0 3 0 179366 641 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643780 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1800.07
Current children cumulated vsize (KiB) 329112

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1800.71 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 20946
/proc/meminfo: memFree=1404728/2055920 swapFree=4042072/4192956
[pid=20943] ppid=20941 vsize=329112 CPUtime=1800.07
/proc/20943/stat : 20943 (glpPBv3) R 20941 20943 17770 0 -1 0 1231927 0 3 0 179366 641 0 0 25 0 1 0 125855519 337010688 81883 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643780 0 0 4096 0 0 0 0 17 1 0 0
/proc/20943/statm: 82278 81883 221 40 0 81693 0
Current children cumulated CPU time (s) 1800.07
Current children cumulated vsize (KiB) 329112

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1800.76
CPU time (s): 1800.14
CPU user time (s): 1793.67
CPU system time (s): 6.47102
CPU usage (%): 99.9652
Max. virtual memory (cumulated for all children) (KiB): 343160

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1793.67
system time used= 6.47102
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 1231927
page faults= 3
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 17
involuntary context switches= 35911

runsolver used 1.91871 second user time and 4.64229 second system time

The end

Launcher Data (download as text)

Begin job on node42 on Tue Apr 17 03:10:36 UTC 2007

IDJOB= 355184
IDBENCH= 2951
IDSOLVER= 166
FILE ID= node42/355184-1176779436

PBS_JOBID= 4580787

Free space on /tmp= 66488 MiB

SOLVER NAME= glpPB 0.2
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-unif-100_100.08.opb
COMMAND LINE= glpPBv3 /tmp/evaluation/355184-1176779436/instance-355184-1176779436.opb
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node42/convwatcher-355184-1176779436 -o ROOT/results/node42/conversion-355184-1176779436 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355184-1176779436/instance-355184-1176779436.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node42/watcher-355184-1176779436 -o ROOT/results/node42/solver-355184-1176779436 -C 1800 -W 3600 -M 1800 --output-limit 1,15  glpPBv3 /tmp/evaluation/355184-1176779436/instance-355184-1176779436.opb

META MD5SUM SOLVER= 9ebec3e8d890fdeefad01654ad9b68b7
MD5SUM BENCH=  7e2e59a69914c0aa8f6d18f073e252a7

RANDOM SEED= 805875854

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node42.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.277
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.277
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1735624 kB
Buffers:         16736 kB
Cached:         191668 kB
SwapCached:      32724 kB
Active:         153848 kB
Inactive:       100928 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1735624 kB
SwapTotal:     4192956 kB
SwapFree:      4042072 kB
Dirty:           17152 kB
Writeback:           0 kB
Mapped:          37020 kB
Slab:            50868 kB
Committed_AS:  2971520 kB
PageTables:       1888 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66488 MiB

End job on node42 on Tue Apr 17 03:40:39 UTC 2007