Trace number 355171

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
glpPB 0.2? (TO) 1800.28 1801.02

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.10.opb
MD5SUMf304ba5324add428c73c7022630c48ee
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark49
Best CPU time to get the best result obtained on this benchmark202.313
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 49
Optimality of the best value was proved YES
Number of variables27027
Total number of constraints1883063
Number of constraints which are clauses1877876
Number of constraints which are cardinality constraints (but not clauses)5187
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint182
Number of terms in the objective function 182
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 182
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 180
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 362
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00/0.12	c glpPB 0.2 (July 2006)
0.00/0.12	c An Application of GLPK 4.10 for PB Constraints
0.00/0.12	c Done @ University of Michigan, Ann Arbor, MI
0.00/0.12	c  by Hossein Sheini

Verifier Data (download as text)

ERROR: no interpretation found !

Conversion Script Data (download as text)

/tmp/evaluation/355171-1176778472/instance-355171-1176778472.opb is already a linear file

Watcher Data (download as text)

runsolver version 3.2.2 (c) roussel@cril.univ-artois.fr

command line: runsolver --timestamp -w ROOT/results/node14/watcher-355171-1176778472 -o ROOT/results/node14/solver-355171-1176778472 -C 1800 -W 3600 -M 1800 --output-limit 1,15 glpPBv3 /tmp/evaluation/355171-1176778472/instance-355171-1176778472.opb 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 3600 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.92 0.98 0.99 3/77 28949
/proc/meminfo: memFree=1737464/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=18568 CPUtime=0
/proc/28949/stat : 28949 (runsolver) D 28947 28949 27692 0 -1 4194368 17 0 0 0 0 0 0 0 18 0 1 0 125765109 19013632 292 18446744073709551615 4194304 4296420 548682068960 18446744073709551615 212234464551 0 0 4096 24578 18446744071563608240 0 0 17 1 0 0
/proc/28949/statm: 4642 292 257 24 0 2626 0

[startup+0.095295 s]
/proc/loadavg: 0.92 0.98 0.99 3/77 28949
/proc/meminfo: memFree=1737464/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=2384 CPUtime=0
/proc/28949/stat : 28949 (glpPBv3) D 28947 28949 27692 0 -1 0 149 0 5 0 0 0 0 0 18 0 1 0 125765109 2441216 125 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 7773648 0 0 4096 0 18446744071563479169 0 0 17 0 0 0
/proc/28949/statm: 596 125 104 40 0 11 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 2384

[startup+0.102292 s]
/proc/loadavg: 0.92 0.98 0.99 3/77 28949
/proc/meminfo: memFree=1737464/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=2384 CPUtime=0
/proc/28949/stat : 28949 (glpPBv3) D 28947 28949 27692 0 -1 0 149 0 6 0 0 0 0 0 18 0 1 0 125765109 2441216 126 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 7389264 0 0 4096 0 18446744071563479169 0 0 17 0 0 0
/proc/28949/statm: 596 126 105 40 0 11 0
Current children cumulated CPU time (s) 0
Current children cumulated vsize (KiB) 2384

[startup+0.302315 s]
/proc/loadavg: 0.92 0.98 0.99 3/77 28949
/proc/meminfo: memFree=1737464/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=5580 CPUtime=0.17
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1004 0 16 0 17 0 0 0 18 0 1 0 125765109 5713920 990 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134530899 0 0 4096 0 0 0 0 17 0 0 0
/proc/28949/statm: 1395 990 199 40 0 810 0
Current children cumulated CPU time (s) 0.17
Current children cumulated vsize (KiB) 5580

[startup+0.702354 s]
/proc/loadavg: 0.92 0.98 0.99 3/77 28949
/proc/meminfo: memFree=1737464/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=10108 CPUtime=0.58
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 2105 0 16 0 57 1 0 0 22 0 1 0 125765109 10350592 2091 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134518691 0 0 4096 0 0 0 0 17 0 0 0
/proc/28949/statm: 2527 2091 199 40 0 1942 0
Current children cumulated CPU time (s) 0.58
Current children cumulated vsize (KiB) 10108

[startup+1.5015 s]
/proc/loadavg: 0.93 0.98 0.99 2/78 28950
/proc/meminfo: memFree=1724592/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=18368 CPUtime=1.37
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 4194 0 16 0 135 2 0 0 25 0 1 0 125765109 18808832 4180 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 7362171 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 4592 4181 199 40 0 4007 0
Current children cumulated CPU time (s) 1.37
Current children cumulated vsize (KiB) 18368

[startup+3.10157 s]
/proc/loadavg: 0.93 0.98 0.99 2/78 28950
/proc/meminfo: memFree=1713392/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=34352 CPUtime=2.97
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 8174 0 16 0 292 5 0 0 25 0 1 0 125765109 35176448 8160 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 7094825 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 8588 8160 199 40 0 8003 0
Current children cumulated CPU time (s) 2.97
Current children cumulated vsize (KiB) 34352

[startup+6.30188 s]
/proc/loadavg: 0.93 0.98 0.99 2/78 28950
/proc/meminfo: memFree=1680432/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=65392 CPUtime=6.18
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 15926 0 16 0 606 12 0 0 25 0 1 0 125765109 66961408 15912 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 7392983 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 16348 15912 199 40 0 15763 0
Current children cumulated CPU time (s) 6.18
Current children cumulated vsize (KiB) 65392

[startup+12.7015 s]
/proc/loadavg: 1.01 1.00 1.00 2/78 28950
/proc/meminfo: memFree=1620016/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=125068 CPUtime=12.57
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 30863 0 16 0 1238 19 0 0 25 0 1 0 125765109 128069632 30849 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 7392983 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 31267 30849 199 40 0 30682 0
Current children cumulated CPU time (s) 12.57
Current children cumulated vsize (KiB) 125068

[startup+25.5017 s]
/proc/loadavg: 1.01 1.00 1.00 2/78 28950
/proc/meminfo: memFree=1498672/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=242696 CPUtime=25.37
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 60256 0 16 0 2504 33 0 0 25 0 1 0 125765109 248520704 60242 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 4294960144 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 60674 60242 199 40 0 60089 0
Current children cumulated CPU time (s) 25.37
Current children cumulated vsize (KiB) 242696

[startup+51.1012 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28950
/proc/meminfo: memFree=480944/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=1255812 CPUtime=50.94
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 366069 0 16 0 4928 166 0 0 25 0 1 0 125765109 1285951488 313548 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583590 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 313953 313548 221 40 0 313368 0
Current children cumulated CPU time (s) 50.94
Current children cumulated vsize (KiB) 1255812

[startup+102.305 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28950
/proc/meminfo: memFree=370032/2055920 swapFree=4128664/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=102.13
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 465377 0 16 0 9999 214 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643524 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 102.13
Current children cumulated vsize (KiB) 1366152

[startup+162.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28950
/proc/meminfo: memFree=369904/2055920 swapFree=4128720/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=162.12
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 509513 0 16 0 15974 238 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643172 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 162.12
Current children cumulated vsize (KiB) 1366152

[startup+222.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28950
/proc/meminfo: memFree=369904/2055920 swapFree=4128720/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=222.1
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 553649 0 16 0 21949 261 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587128 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 222.1
Current children cumulated vsize (KiB) 1366152

[startup+282.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28950
/proc/meminfo: memFree=369776/2055920 swapFree=4128720/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=282.08
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 597785 0 16 0 27925 283 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643498 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 282.08
Current children cumulated vsize (KiB) 1366152

[startup+342.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 28950
/proc/meminfo: memFree=311088/2055920 swapFree=4128776/4192956
[pid=28949] ppid=28947 vsize=1425000 CPUtime=342.06
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 656633 0 16 0 33894 312 0 0 25 0 1 0 125765109 1459200000 355845 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134638960 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 356250 355845 221 40 0 355665 0
Current children cumulated CPU time (s) 342.06
Current children cumulated vsize (KiB) 1425000

[startup+402.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/84 29032
/proc/meminfo: memFree=368256/2055920 swapFree=4128776/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=402
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 700769 0 16 0 39865 335 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587144 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 402
Current children cumulated vsize (KiB) 1366152

[startup+462.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=369392/2055920 swapFree=4128828/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=461.92
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 744905 0 16 0 45834 358 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643553 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 461.92
Current children cumulated vsize (KiB) 1366152

[startup+522.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=369328/2055920 swapFree=4128828/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=521.91
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 789041 0 16 0 51810 381 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643256 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 521.91
Current children cumulated vsize (KiB) 1366152

[startup+582.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=369328/2055920 swapFree=4128828/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=581.89
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 833177 0 16 0 57785 404 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 581.89
Current children cumulated vsize (KiB) 1366152

[startup+642.301 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=369328/2055920 swapFree=4128884/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=641.88
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 877313 0 16 0 63761 427 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589593 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 641.88
Current children cumulated vsize (KiB) 1366152


################
# More data... #
################

[startup+882.302 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=310512/2055920 swapFree=4128940/4192956
[pid=28949] ppid=28947 vsize=1425000 CPUtime=881.8
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1068569 0 16 0 87655 525 0 0 25 0 1 0 125765109 1459200000 355845 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134636076 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 356250 355845 221 40 0 355665 0
Current children cumulated CPU time (s) 881.8
Current children cumulated vsize (KiB) 1425000

[startup+942.303 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=310512/2055920 swapFree=4128940/4192956
[pid=28949] ppid=28947 vsize=1425000 CPUtime=941.79
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1112705 0 16 0 93631 548 0 0 25 0 1 0 125765109 1459200000 355845 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134638487 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 356250 355845 221 40 0 355665 0
Current children cumulated CPU time (s) 941.79
Current children cumulated vsize (KiB) 1425000

[startup+1002.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=310448/2055920 swapFree=4129000/4192956
[pid=28949] ppid=28947 vsize=1425000 CPUtime=1001.78
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1156841 0 16 0 99607 571 0 0 25 0 1 0 125765109 1459200000 355845 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134636152 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 356250 355845 221 40 0 355665 0
Current children cumulated CPU time (s) 1001.78
Current children cumulated vsize (KiB) 1425000

[startup+1062.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=369136/2055920 swapFree=4129000/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1061.75
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1186265 0 16 0 105588 587 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583573 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1061.75
Current children cumulated vsize (KiB) 1366152

[startup+1122.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=369008/2055920 swapFree=4129056/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1121.74
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1230401 0 16 0 111565 609 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583732 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1121.74
Current children cumulated vsize (KiB) 1366152

[startup+1182.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368944/2055920 swapFree=4129056/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1181.73
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1274537 0 16 0 117541 632 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134606803 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1181.73
Current children cumulated vsize (KiB) 1366152

[startup+1242.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368816/2055920 swapFree=4129056/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1241.71
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1318673 0 16 0 123517 654 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1241.71
Current children cumulated vsize (KiB) 1366152

[startup+1302.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368816/2055920 swapFree=4129112/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1301.7
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1362809 0 16 0 129493 677 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589605 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1301.7
Current children cumulated vsize (KiB) 1366152

[startup+1362.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368816/2055920 swapFree=4129112/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1361.68
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1406945 0 16 0 135469 699 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134606790 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1361.68
Current children cumulated vsize (KiB) 1366152

[startup+1422.31 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368752/2055920 swapFree=4129112/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1421.66
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1451081 0 16 0 141444 722 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643512 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1421.66
Current children cumulated vsize (KiB) 1366152

[startup+1482.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368752/2055920 swapFree=4129168/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1481.64
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1495217 0 16 0 147419 745 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643272 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1481.64
Current children cumulated vsize (KiB) 1366152

[startup+1542.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368688/2055920 swapFree=4129168/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1541.62
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1539353 0 16 0 153394 768 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643505 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1541.62
Current children cumulated vsize (KiB) 1366152

[startup+1602.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=309936/2055920 swapFree=4129224/4192956
[pid=28949] ppid=28947 vsize=1425000 CPUtime=1601.61
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1583489 0 16 0 159371 790 0 0 25 0 1 0 125765109 1459200000 355845 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639166 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 356250 355845 221 40 0 355665 0
Current children cumulated CPU time (s) 1601.61
Current children cumulated vsize (KiB) 1425000

[startup+1662.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368560/2055920 swapFree=4129224/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1661.59
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1612913 0 16 0 165353 806 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643505 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1661.59
Current children cumulated vsize (KiB) 1366152

[startup+1722.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368560/2055920 swapFree=4129224/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1721.58
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1657049 0 16 0 171329 829 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643782 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1721.58
Current children cumulated vsize (KiB) 1366152

[startup+1782.3 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368496/2055920 swapFree=4129284/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1781.56
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1701185 0 16 0 177304 852 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643281 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1781.56
Current children cumulated vsize (KiB) 1366152



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1800.8 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368496/2055920 swapFree=4129284/4192956
[pid=28949] ppid=28947 vsize=1366152 CPUtime=1800.06
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 0 1715897 0 16 0 179146 860 0 0 25 0 1 0 125765109 1398939648 341133 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587128 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 341538 341133 221 40 0 340953 0
Current children cumulated CPU time (s) 1800.06
Current children cumulated vsize (KiB) 1366152

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Solver just ended. Dumping a history of the last processes samples

[startup+1801 s]
/proc/loadavg: 1.00 1.00 1.00 2/78 29148
/proc/meminfo: memFree=368496/2055920 swapFree=4129284/4192956
[pid=28949] ppid=28947 vsize=0 CPUtime=1800.25
/proc/28949/stat : 28949 (glpPBv3) R 28947 28949 27692 0 -1 1028 1715897 0 16 0 179146 879 0 0 25 0 1 0 125765109 0 0 18446744073709551615 0 0 0 0 0 0 0 4096 0 0 0 0 17 1 0 0
/proc/28949/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 1800.25
Current children cumulated vsize (KiB) 0

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.02
CPU time (s): 1800.28
CPU user time (s): 1791.47
CPU system time (s): 8.81066
CPU usage (%): 99.9591
Max. virtual memory (cumulated for all children) (KiB): 1425000

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 1791.47
system time used= 8.81066
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 1715897
page faults= 16
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 45
involuntary context switches= 30701

runsolver used 2.00969 second user time and 4.54131 second system time

The end

Launcher Data (download as text)

Begin job on node14 on Tue Apr 17 02:54:33 UTC 2007

IDJOB= 355171
IDBENCH= 2950
IDSOLVER= 166
FILE ID= node14/355171-1176778472

PBS_JOBID= 4580780

Free space on /tmp= 66418 MiB

SOLVER NAME= glpPB 0.2
BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.10.opb
COMMAND LINE= glpPBv3 /tmp/evaluation/355171-1176778472/instance-355171-1176778472.opb
CONVERSION COMMAND LINE= runsolver -w ROOT/results/node14/convwatcher-355171-1176778472 -o ROOT/results/node14/conversion-355171-1176778472 -C 600 -M 1800 PBconversionToLinear /tmp/evaluation/355171-1176778472/instance-355171-1176778472.opb
CONVERSION RUNSOLVER STATUS CODE= 0
CONVERSION STATUS CODE= 0

RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node14/watcher-355171-1176778472 -o ROOT/results/node14/solver-355171-1176778472 -C 1800 -W 3600 -M 1800 --output-limit 1,15  glpPBv3 /tmp/evaluation/355171-1176778472/instance-355171-1176778472.opb

META MD5SUM SOLVER= 9ebec3e8d890fdeefad01654ad9b68b7
MD5SUM BENCH=  f304ba5324add428c73c7022630c48ee

RANDOM SEED= 810937761

TIME LIMIT= 1800 seconds
MEMORY LIMIT= 1800 MiB

Linux node14.alineos.net 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005 x86_64 x86_64 x86_64 GNU/Linux

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.227
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.227
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1737936 kB
Buffers:         18360 kB
Cached:         215380 kB
SwapCached:      29556 kB
Active:         124472 kB
Inactive:       150736 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1737936 kB
SwapTotal:     4192956 kB
SwapFree:      4128664 kB
Dirty:           69296 kB
Writeback:           0 kB
Mapped:          30104 kB
Slab:            28364 kB
Committed_AS:  6530472 kB
PageTables:       1784 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66418 MiB

End job on node14 on Tue Apr 17 03:24:36 UTC 2007