Trace number 85871

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
glpPB 0.2? (TO) 1800.79 1801.41

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.12.opb
MD5SUMb1eab2cf935e923f8f1ff9f24be23d02
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark41
Best CPU time to get the best result obtained on this benchmark91.768
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 41
Optimality of the best value was proved YES
Number of variables25484
Total number of constraints1553328
Number of constraints which are clauses1549096
Number of constraints which are cardinality constraints (but not clauses)4232
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint184
Number of terms in the objective function 184
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 184
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 182
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 366
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00	c glpPB 0.2 (July 2006)
0.00	c An Application of GLPK 4.10 for PB Constraints
0.00	c Done @ University of Michigan, Ann Arbor, MI
0.00	c  by Hossein Sheini

Verifier Data (download as text)

ERROR: no interpretation found !

Watcher Data (download as text)

Enforcing CPU limit (will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime (will send SIGXCPU) limit: 1830 seconds
Enforcing Stack size limit: 67108864 bytes

runsolver version 3.0.3 (c) roussel@cril.univ-artois.fr

Enforcing memory limit (will send SIGKILL): 1843200 Kb
Enforcing VSIZE limit: 1887436800 bytes
command line: runsolver --timestamp -w ROOT/results/node20/watcher-85871-1154176755 -o ROOT/results/node20/solver-85871-1154176755 -C 1800 -M 1800 -S 64 ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node20/85871-1154176755/instance-85871-1154176755.opb 

Current StackSize limit: 67108864 bytes

/proc/loadavg: 0.92 0.98 0.92 3/64 5795
/proc/meminfo: memFree=1011448/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=2668 CPUtime=0
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 273 0 0 0 0 0 0 0 18 0 1 0 164536373 2732032 243 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134527243 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 667 243 199 40 0 84 0

[startup+10.0029 s]
/proc/loadavg: 0.93 0.98 0.92 2/64 5795
/proc/meminfo: memFree=907904/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=106308 CPUtime=9.99
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 26173 0 0 0 988 11 0 0 25 0 1 0 164536373 108859392 26143 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 8079134 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 26577 26143 199 40 0 25994 0
Current children cumulated CPU time (s) 9.99
Current children cumulated vsize (Kb) 106308

[startup+20.0102 s]
/proc/loadavg: 0.94 0.98 0.92 2/64 5795
/proc/meminfo: memFree=813312/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=200888 CPUtime=19.99
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 49839 0 0 0 1977 22 0 0 25 0 1 0 164536373 205709312 49809 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134531606 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 50222 49809 199 40 0 49639 0
Current children cumulated CPU time (s) 19.99
Current children cumulated vsize (Kb) 200888

[startup+30.0174 s]
/proc/loadavg: 0.95 0.98 0.92 2/64 5795
/proc/meminfo: memFree=21120/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=991496 CPUtime=30
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 276652 0 0 0 2881 119 0 0 25 0 1 0 164536373 1015291904 247468 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134638630 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 247874 247468 211 40 0 247291 0
Current children cumulated CPU time (s) 30
Current children cumulated vsize (Kb) 991496

[startup+40.0236 s]
/proc/loadavg: 0.96 0.98 0.92 2/64 5795
/proc/meminfo: memFree=15424/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1029304 CPUtime=40
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 298251 0 0 0 3871 129 0 0 25 0 1 0 164536373 1054007296 256930 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643165 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 257326 256930 221 40 0 256743 0
Current children cumulated CPU time (s) 40
Current children cumulated vsize (Kb) 1029304

[startup+50.0298 s]
/proc/loadavg: 0.96 0.98 0.92 2/64 5795
/proc/meminfo: memFree=63360/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=50
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 355899 0 0 0 4842 158 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581739 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 50
Current children cumulated vsize (Kb) 1120324

[startup+60.036 s]
/proc/loadavg: 0.97 0.98 0.92 2/64 5795
/proc/meminfo: memFree=63488/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=60
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 355899 0 0 0 5842 158 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 60
Current children cumulated vsize (Kb) 1120324

[startup+70.0423 s]
/proc/loadavg: 0.97 0.98 0.92 2/64 5795
/proc/meminfo: memFree=63488/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=70.01
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 368035 0 0 0 6836 165 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583590 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 70.01
Current children cumulated vsize (Kb) 1120324

[startup+80.0485 s]
/proc/loadavg: 0.98 0.98 0.92 2/64 5795
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=80.01
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 380171 0 0 0 7829 172 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582224 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 80.01
Current children cumulated vsize (Kb) 1120324

[startup+90.0547 s]
/proc/loadavg: 1.05 1.00 0.93 2/64 5795
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=90.01
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 380171 0 0 0 8829 172 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643168 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 90.01
Current children cumulated vsize (Kb) 1120324

[startup+100.061 s]
/proc/loadavg: 1.04 1.00 0.93 2/64 5795
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=100.02
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 392307 0 0 0 9823 179 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583593 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 100.02
Current children cumulated vsize (Kb) 1120324

[startup+110.067 s]
/proc/loadavg: 1.03 1.00 0.93 2/64 5795
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=110.02
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 404443 0 0 0 10817 185 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 110.02
Current children cumulated vsize (Kb) 1120324

[startup+120.073 s]
/proc/loadavg: 1.03 1.00 0.93 2/64 5795
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=120.02
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 404443 0 0 0 11817 185 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587159 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 120.02
Current children cumulated vsize (Kb) 1120324

[startup+130.08 s]
/proc/loadavg: 1.02 1.00 0.93 2/64 5795
/proc/meminfo: memFree=63552/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=130.03
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 416579 0 0 0 12811 192 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581972 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 130.03
Current children cumulated vsize (Kb) 1120324

[startup+140.087 s]
/proc/loadavg: 1.02 1.00 0.93 2/64 5795
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=140.03
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 428715 0 0 0 13805 198 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581732 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 140.03
Current children cumulated vsize (Kb) 1120324

[startup+150.094 s]
/proc/loadavg: 1.02 1.00 0.93 2/64 5795
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=150.03
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 428715 0 0 0 14805 198 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643364 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 150.03
Current children cumulated vsize (Kb) 1120324

[startup+160.1 s]
/proc/loadavg: 1.01 1.00 0.93 2/64 5797
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=160.04
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 440851 0 0 0 15799 205 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583588 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 160.04
Current children cumulated vsize (Kb) 1120324

[startup+170.107 s]
/proc/loadavg: 1.01 1.00 0.93 2/64 5797
/proc/meminfo: memFree=15232/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1168868 CPUtime=170.05
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 452987 0 0 0 16794 211 0 0 25 0 1 0 164536373 1196920832 291821 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134641656 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 292217 291821 221 40 0 291634 0
Current children cumulated CPU time (s) 170.05
Current children cumulated vsize (Kb) 1168868

[startup+180.113 s]
/proc/loadavg: 1.01 1.00 0.93 2/64 5797
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=180.04
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 452987 0 0 0 17793 211 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643580 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 180.04
Current children cumulated vsize (Kb) 1120324

[startup+190.119 s]
/proc/loadavg: 1.01 1.00 0.93 2/64 5797
/proc/meminfo: memFree=63616/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=190.04
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 465123 0 0 0 18787 217 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587711 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 190.04
Current children cumulated vsize (Kb) 1120324

[startup+200.125 s]
/proc/loadavg: 1.01 1.00 0.93 2/64 5797
/proc/meminfo: memFree=15232/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1168868 CPUtime=200.05
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 477259 0 0 0 19781 224 0 0 25 0 1 0 164536373 1196920832 291821 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639276 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 292217 291821 221 40 0 291634 0
Current children cumulated CPU time (s) 200.05
Current children cumulated vsize (Kb) 1168868

[startup+210.132 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5797

################
# More data... #
################

/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1618043 0 0 0 177296 853 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1781.49
Current children cumulated vsize (Kb) 1120324

[startup+1783.13 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=16576/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1168868 CPUtime=1782.51
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 177392 859 0 0 25 0 1 0 164536373 1196920832 291821 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134638960 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 292217 291821 221 40 0 291634 0
Current children cumulated CPU time (s) 1782.51
Current children cumulated vsize (Kb) 1168868

[startup+1784.13 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=16576/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1168868 CPUtime=1783.51
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 177492 859 0 0 25 0 1 0 164536373 1196920832 291821 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134634399 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 292217 291821 221 40 0 291634 0
Current children cumulated CPU time (s) 1783.51
Current children cumulated vsize (Kb) 1168868

[startup+1785.14 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1784.51
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 177592 859 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134607195 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1784.51
Current children cumulated vsize (Kb) 1120324

[startup+1786.14 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1785.51
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 177692 859 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581813 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1785.51
Current children cumulated vsize (Kb) 1120324

[startup+1787.15 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1786.52
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 177793 859 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1786.52
Current children cumulated vsize (Kb) 1120324

[startup+1788.15 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1787.52
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 177893 859 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134606883 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1787.52
Current children cumulated vsize (Kb) 1120324

[startup+1789.16 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1788.53
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 177994 859 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643583 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1788.53
Current children cumulated vsize (Kb) 1120324

[startup+1790.16 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1789.53
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178094 859 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1789.53
Current children cumulated vsize (Kb) 1120324

[startup+1791.17 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1790.54
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178195 859 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643284 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1790.54
Current children cumulated vsize (Kb) 1120324

[startup+1792.17 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1791.55
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178295 860 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134605736 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1791.55
Current children cumulated vsize (Kb) 1120324

[startup+1793.18 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1792.56
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178396 860 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583859 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1792.56
Current children cumulated vsize (Kb) 1120324

[startup+1794.18 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1793.56
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178496 860 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589599 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1793.56
Current children cumulated vsize (Kb) 1120324

[startup+1795.19 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1794.56
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178596 860 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582361 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1794.56
Current children cumulated vsize (Kb) 1120324

[startup+1796.19 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1795.57
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178697 860 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583606 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1795.57
Current children cumulated vsize (Kb) 1120324

[startup+1797.2 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1796.57
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178797 860 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643691 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1796.57
Current children cumulated vsize (Kb) 1120324

[startup+1798.2 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1797.58
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178898 860 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134606809 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1797.58
Current children cumulated vsize (Kb) 1120324

[startup+1799.21 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=64896/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1120324 CPUtime=1798.58
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1630179 0 0 0 178998 860 0 0 25 0 1 0 164536373 1147211776 279685 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643498 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 280081 279685 221 40 0 279498 0
Current children cumulated CPU time (s) 1798.58
Current children cumulated vsize (Kb) 1120324

[startup+1800.21 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=16576/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1168868 CPUtime=1799.58
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1642315 0 0 0 179093 865 0 0 25 0 1 0 164536373 1196920832 291821 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134636920 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 292217 291821 221 40 0 291634 0
Current children cumulated CPU time (s) 1799.58
Current children cumulated vsize (Kb) 1168868

[startup+1801.22 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=16512/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1168868 CPUtime=1800.59
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1642315 0 0 0 179194 865 0 0 25 0 1 0 164536373 1196920832 291821 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639282 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 292217 291821 221 40 0 291634 0
Current children cumulated CPU time (s) 1800.59
Current children cumulated vsize (Kb) 1168868



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.22 s]
/proc/loadavg: 1.00 1.00 0.93 2/64 5995
/proc/meminfo: memFree=16512/2055920 swapFree=4183448/4192956
[pid=5795] ppid=5793 vsize=1168868 CPUtime=1800.59
/proc/5795/stat : 5795 (glpPBv3) R 5793 5795 5746 0 -1 0 1642315 0 0 0 179194 865 0 0 25 0 1 0 164536373 1196920832 291821 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639272 0 0 4096 0 0 0 0 17 1 0 0
/proc/5795/statm: 292217 291821 221 40 0 291634 0
Current children cumulated CPU time (s) 1800.59
Current children cumulated vsize (Kb) 1168868

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.41
CPU time (s): 1800.79
CPU user time (s): 1791.95
CPU system time (s): 8.84166
CPU usage (%): 99.9654
Max. virtual memory (cumulated for all children) (Kb): 1168868
The end

Launcher Data (download as text)

Begin job on node20 on Sat Jul 29 12:39:18 UTC 2006


FILE ID= 85871-1154176755

PBS_JOBID= 893648

BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.12.opb
COMMAND LINE= ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node20/85871-1154176755/instance-85871-1154176755.opb
RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node20/watcher-85871-1154176755 -o ROOT/results/node20/solver-85871-1154176755 -C 1800 -M 1800 -S 64  ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node20/85871-1154176755/instance-85871-1154176755.opb

MD5SUM SOLVER= 29ce95346658d7502ba983059bfb8cff
MD5SUM BENCH=  b1eab2cf935e923f8f1ff9f24be23d02

RANDOM SEED= 708124463

TIMEOUT= 1800 seconds


/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.239
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.239
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1011656 kB
Buffers:         42604 kB
Cached:         918428 kB
SwapCached:       3412 kB
Active:         167856 kB
Inactive:       801884 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1011656 kB
SwapTotal:     4192956 kB
SwapFree:      4183448 kB
Dirty:             184 kB
Writeback:           0 kB
Mapped:          14740 kB
Slab:            60496 kB
Committed_AS:   672676 kB
PageTables:       1428 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB


End job on node20 on Sat Jul 29 13:09:20 UTC 2006