Trace number 85867

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
glpPB 0.2? (TO) 1800.87 1801.41

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.10.opb
MD5SUMf304ba5324add428c73c7022630c48ee
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark49
Best CPU time to get the best result obtained on this benchmark193.504
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 49
Optimality of the best value was proved YES
Number of variables27027
Total number of constraints1883063
Number of constraints which are clauses1877876
Number of constraints which are cardinality constraints (but not clauses)5187
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint182
Number of terms in the objective function 182
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 182
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 180
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 362
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00	c glpPB 0.2 (July 2006)
0.00	c An Application of GLPK 4.10 for PB Constraints
0.00	c Done @ University of Michigan, Ann Arbor, MI
0.00	c  by Hossein Sheini

Verifier Data (download as text)

ERROR: no interpretation found !

Watcher Data (download as text)

Enforcing CPU limit (will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime (will send SIGXCPU) limit: 1830 seconds
Enforcing Stack size limit: 67108864 bytes

runsolver version 3.0.3 (c) roussel@cril.univ-artois.fr

Enforcing memory limit (will send SIGKILL): 1843200 Kb
Enforcing VSIZE limit: 1887436800 bytes
command line: runsolver --timestamp -w ROOT/results/node51/watcher-85867-1154176706 -o ROOT/results/node51/solver-85867-1154176706 -C 1800 -M 1800 -S 64 ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node51/85867-1154176706/instance-85867-1154176706.opb 

Current StackSize limit: 67108864 bytes

/proc/loadavg: 0.84 0.94 0.90 2/64 16421
/proc/meminfo: memFree=757296/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=268 CPUtime=0
/proc/16421/stat : 16421 (glpPBv3) D 16419 16421 16372 0 -1 0 39 0 0 0 0 0 0 0 18 0 1 0 164541693 274432 23 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 2618148 0 2147483391 4096 0 18446744072099781622 0 0 17 1 0 0
/proc/16421/statm: 67 23 18 40 0 2 0

[startup+10.0026 s]
/proc/loadavg: 0.87 0.94 0.90 2/64 16421
/proc/meminfo: memFree=654448/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=105508 CPUtime=9.99
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 25981 0 0 0 988 11 0 0 25 0 1 0 164541693 108040192 25951 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134519055 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 26377 25951 199 40 0 25794 0
Current children cumulated CPU time (s) 9.99
Current children cumulated vsize (Kb) 105508

[startup+20.0085 s]
/proc/loadavg: 0.89 0.94 0.90 2/64 16421
/proc/meminfo: memFree=559664/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=200352 CPUtime=19.98
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 49694 0 0 0 1976 22 0 0 25 0 1 0 164541693 205160448 49664 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134527161 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 50088 49664 199 40 0 49505 0
Current children cumulated CPU time (s) 19.98
Current children cumulated vsize (Kb) 200352

[startup+30.0144 s]
/proc/loadavg: 0.90 0.94 0.90 2/64 16421
/proc/meminfo: memFree=146416/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=612732 CPUtime=29.98
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 159134 0 0 0 2932 66 0 0 25 0 1 0 164541693 627437568 152762 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134542140 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 153183 152762 203 40 0 152600 0
Current children cumulated CPU time (s) 29.98
Current children cumulated vsize (Kb) 612732

[startup+40.0203 s]
/proc/loadavg: 0.92 0.94 0.90 2/64 16421
/proc/meminfo: memFree=15600/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1255832 CPUtime=39.99
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 366092 0 0 0 3830 169 0 0 25 0 1 0 164541693 1285971968 313555 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 313958 313555 221 40 0 313375 0
Current children cumulated CPU time (s) 39.99
Current children cumulated vsize (Kb) 1255832

[startup+50.0292 s]
/proc/loadavg: 0.93 0.94 0.90 2/64 16422
/proc/meminfo: memFree=15728/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1255832 CPUtime=49.99
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 366092 0 0 0 4830 169 0 0 25 0 1 0 164541693 1285971968 313555 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134605662 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 313958 313555 221 40 0 313375 0
Current children cumulated CPU time (s) 49.99
Current children cumulated vsize (Kb) 1255832

[startup+60.0351 s]
/proc/loadavg: 0.94 0.95 0.90 2/64 16423
/proc/meminfo: memFree=73648/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=60
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 435976 0 0 0 5793 207 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589975 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 60
Current children cumulated vsize (Kb) 1366172

[startup+70.042 s]
/proc/loadavg: 0.95 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73648/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=70
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 435976 0 0 0 6793 207 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643170 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 70
Current children cumulated vsize (Kb) 1366172

[startup+80.0479 s]
/proc/loadavg: 0.96 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=80.01
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 450688 0 0 0 7786 215 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581956 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 80.01
Current children cumulated vsize (Kb) 1366172

[startup+90.0538 s]
/proc/loadavg: 0.96 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=90.01
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 450688 0 0 0 8786 215 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583896 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 90.01
Current children cumulated vsize (Kb) 1366172

[startup+100.06 s]
/proc/loadavg: 0.97 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=100.02
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 465400 0 0 0 9779 223 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643505 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 100.02
Current children cumulated vsize (Kb) 1366172

[startup+110.066 s]
/proc/loadavg: 0.97 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=110.02
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 465400 0 0 0 10779 223 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643491 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 110.02
Current children cumulated vsize (Kb) 1366172

[startup+120.073 s]
/proc/loadavg: 0.98 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=120.02
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 480112 0 0 0 11771 231 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589584 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 120.02
Current children cumulated vsize (Kb) 1366172

[startup+130.078 s]
/proc/loadavg: 0.98 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=130.02
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 480112 0 0 0 12771 231 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643691 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 130.02
Current children cumulated vsize (Kb) 1366172

[startup+140.084 s]
/proc/loadavg: 0.98 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=140.03
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 494824 0 0 0 13764 239 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587730 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 140.03
Current children cumulated vsize (Kb) 1366172

[startup+150.09 s]
/proc/loadavg: 0.98 0.95 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=150.03
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 494824 0 0 0 14764 239 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134587134 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 150.03
Current children cumulated vsize (Kb) 1366172

[startup+160.096 s]
/proc/loadavg: 0.99 0.96 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=160.04
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 509536 0 0 0 15757 247 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643764 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 160.04
Current children cumulated vsize (Kb) 1366172

[startup+170.102 s]
/proc/loadavg: 0.99 0.96 0.91 2/64 16423
/proc/meminfo: memFree=15088/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1425020 CPUtime=170.04
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 524248 0 0 0 16750 254 0 0 25 0 1 0 164541693 1459220480 355852 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134635939 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 356255 355852 221 40 0 355672 0
Current children cumulated CPU time (s) 170.04
Current children cumulated vsize (Kb) 1425020

[startup+180.108 s]
/proc/loadavg: 0.99 0.96 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=180.04
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 524248 0 0 0 17749 255 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583726 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 180.04
Current children cumulated vsize (Kb) 1366172

[startup+190.115 s]
/proc/loadavg: 0.99 0.96 0.91 2/64 16423
/proc/meminfo: memFree=15024/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1425020 CPUtime=190.05
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 538960 0 0 0 18743 262 0 0 25 0 1 0 164541693 1459220480 355852 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134639279 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 356255 355852 221 40 0 355672 0
Current children cumulated CPU time (s) 190.05
Current children cumulated vsize (Kb) 1425020

[startup+200.121 s]
/proc/loadavg: 0.99 0.96 0.91 2/64 16423
/proc/meminfo: memFree=73712/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=200.05
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 538960 0 0 0 19742 263 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643626 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 200.05
Current children cumulated vsize (Kb) 1366172

[startup+210.127 s]
/proc/loadavg: 0.99 0.96 0.91 2/64 16423

################
# More data... #
################

/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1701208 0 0 0 177254 899 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582361 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1781.53
Current children cumulated vsize (Kb) 1366172

[startup+1783.08 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74672/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1782.54
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1701208 0 0 0 177355 899 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643691 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1782.54
Current children cumulated vsize (Kb) 1366172

[startup+1784.08 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=16048/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1425020 CPUtime=1783.55
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 177449 906 0 0 25 0 1 0 164541693 1459220480 355852 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134636377 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 356255 355852 221 40 0 355672 0
Current children cumulated CPU time (s) 1783.55
Current children cumulated vsize (Kb) 1425020

[startup+1785.09 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=16048/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1425020 CPUtime=1784.55
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 177549 906 0 0 25 0 1 0 164541693 1459220480 355852 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134638859 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 356255 355852 221 40 0 355672 0
Current children cumulated CPU time (s) 1784.55
Current children cumulated vsize (Kb) 1425020

[startup+1786.09 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74672/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1785.56
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 177649 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1785.56
Current children cumulated vsize (Kb) 1366172

[startup+1787.1 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74672/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1786.56
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 177749 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643272 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1786.56
Current children cumulated vsize (Kb) 1366172

[startup+1788.1 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1787.57
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 177850 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1787.57
Current children cumulated vsize (Kb) 1366172

[startup+1789.11 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1788.57
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 177950 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583859 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1788.57
Current children cumulated vsize (Kb) 1366172

[startup+1790.11 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1789.58
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178051 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581813 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1789.58
Current children cumulated vsize (Kb) 1366172

[startup+1791.12 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1790.58
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178151 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1790.58
Current children cumulated vsize (Kb) 1366172

[startup+1792.12 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1791.58
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178251 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134582408 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1791.58
Current children cumulated vsize (Kb) 1366172

[startup+1793.13 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1792.59
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178352 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134606793 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1792.59
Current children cumulated vsize (Kb) 1366172

[startup+1794.13 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1793.59
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178452 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643494 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1793.59
Current children cumulated vsize (Kb) 1366172

[startup+1795.14 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1794.6
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178553 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643286 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1794.6
Current children cumulated vsize (Kb) 1366172

[startup+1796.14 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1795.6
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178653 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581956 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1795.6
Current children cumulated vsize (Kb) 1366172

[startup+1797.15 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1796.61
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178754 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134583695 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1796.61
Current children cumulated vsize (Kb) 1366172

[startup+1798.15 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1797.61
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178854 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643626 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1797.61
Current children cumulated vsize (Kb) 1366172

[startup+1799.16 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1798.62
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 178955 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134581732 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1798.62
Current children cumulated vsize (Kb) 1366172

[startup+1800.16 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1799.62
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 179055 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134643288 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1799.62
Current children cumulated vsize (Kb) 1366172

[startup+1801.17 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1800.63
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 179156 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589599 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1800.63
Current children cumulated vsize (Kb) 1366172



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.17 s]
/proc/loadavg: 0.99 0.97 0.91 2/64 16621
/proc/meminfo: memFree=74736/2055920 swapFree=4183068/4192956
[pid=16421] ppid=16419 vsize=1366172 CPUtime=1800.63
/proc/16421/stat : 16421 (glpPBv3) R 16419 16421 16372 0 -1 0 1715920 0 0 0 179156 907 0 0 25 0 1 0 164541693 1398960128 341140 18446744073709551615 134512640 134678228 4294956672 18446744073709551615 134589634 0 0 4096 0 0 0 0 17 1 0 0
/proc/16421/statm: 341543 341140 221 40 0 340960 0
Current children cumulated CPU time (s) 1800.63
Current children cumulated vsize (Kb) 1366172

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.41
CPU time (s): 1800.87
CPU user time (s): 1791.57
CPU system time (s): 9.30458
CPU usage (%): 99.9701
Max. virtual memory (cumulated for all children) (Kb): 1425020
The end

Launcher Data (download as text)

Begin job on node51 on Sat Jul 29 12:38:29 UTC 2006


FILE ID= 85867-1154176706

PBS_JOBID= 893643

BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.10.opb
COMMAND LINE= ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node51/85867-1154176706/instance-85867-1154176706.opb
RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node51/watcher-85867-1154176706 -o ROOT/results/node51/solver-85867-1154176706 -C 1800 -M 1800 -S 64  ROOT/solvers/PB/PB06final/user8/glpPBv3 ROOT/tmp/node51/85867-1154176706/instance-85867-1154176706.opb

MD5SUM SOLVER= 29ce95346658d7502ba983059bfb8cff
MD5SUM BENCH=  f304ba5324add428c73c7022630c48ee

RANDOM SEED= 853068775

TIMEOUT= 1800 seconds


/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.231
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.231
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:        757496 kB
Buffers:         41184 kB
Cached:        1176576 kB
SwapCached:       3588 kB
Active:         172708 kB
Inactive:      1053580 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:        757496 kB
SwapTotal:     4192956 kB
SwapFree:      4183068 kB
Dirty:             164 kB
Writeback:           0 kB
Mapped:          14496 kB
Slab:            58232 kB
Committed_AS:   739548 kB
PageTables:       1420 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB


End job on node51 on Sat Jul 29 13:08:32 UTC 2006