Trace number 50580

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS 4.1L? (TO) 1800.66 1801.28

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.07.opb
MD5SUM7a51facc2b0ceeb02915874508a30079
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark37
Best CPU time to get the best result obtained on this benchmark97.3562
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 37
Optimality of the best value was proved YES
Number of variables21756
Total number of constraints1266468
Number of constraints which are clauses1262688
Number of constraints which are cardinality constraints (but not clauses)3780
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint168
Number of terms in the objective function 168
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 168
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 166
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 334
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00	c Solving ROOT/tmp/node13/50580-1154115665/instance-50580-1154115665.opb ......
14.31	c done parsing opb.
14.31	o 168
14.33	o 167
14.35	o 166
14.37	o 165
14.39	o 164
14.41	o 163
14.43	o 162
14.45	o 161
14.47	o 160
14.49	o 159
14.51	o 158
14.53	o 157
14.56	o 156
14.58	o 155
14.60	o 154
14.62	o 153
14.64	o 152
14.66	o 151
14.68	o 150
14.70	o 149
14.72	o 148
14.74	o 147
14.76	o 146
14.78	o 145
14.80	o 144
14.82	o 143
14.84	o 142
14.86	o 141
14.88	o 140
14.90	o 139
14.92	o 138
14.94	o 137
14.96	o 136
14.98	o 135
15.00	o 134
15.02	o 133
15.04	o 132
15.06	o 131
15.08	o 130
15.11	o 129
15.13	o 128
15.15	o 127
15.17	o 126
15.19	o 125
15.21	o 124
15.23	o 123
15.25	o 122
15.27	o 121
15.29	o 120
15.31	o 119
15.33	o 118
15.35	o 117
15.37	o 116
15.39	o 115
15.41	o 114
15.43	o 113
15.45	o 112
15.48	o 111
15.50	o 110
15.52	o 109
15.54	o 108
15.56	o 107
15.58	o 106
15.60	o 105
15.62	o 104
15.64	o 103
15.66	o 102
15.68	o 101
15.70	o 100
15.72	o 99
15.74	o 98
15.76	o 97
15.78	o 96
15.80	o 95
15.82	o 94
15.84	o 93
15.87	o 92
15.89	o 91
15.91	o 90
15.93	o 89
17.74	o 88
17.91	o 87
18.14	o 86
18.45	o 85
18.50	o 84
18.64	o 83
18.95	o 82
19.12	o 81
19.17	o 80
19.67	o 79
20.70	o 78
20.75	o 77
26.74	o 76
28.20	o 75
28.27	o 74
56.80	o 73
148.06	o 72
349.15	o 71
349.79	o 70
537.15	o 69
740.28	o 68

Verifier Data (download as text)

ERROR: no interpretation found !

Watcher Data (download as text)

Enforcing CPU limit (will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime (will send SIGXCPU) limit: 1830 seconds
Enforcing Stack size limit: 67108864 bytes

runsolver version 3.0.3 (c) roussel@cril.univ-artois.fr

Enforcing memory limit (will send SIGKILL): 1843200 Kb
Enforcing VSIZE limit: 1887436800 bytes
command line: runsolver --timestamp -w ROOT/results/node13/watcher-50580-1154115665 -o ROOT/results/node13/solver-50580-1154115665 -C 1800 -M 1800 -S 64 ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node13/50580-1154115665/instance-50580-1154115665.opb 410282567 

Current StackSize limit: 67108864 bytes

/proc/loadavg: 0.85 0.98 0.99 3/64 8716
/proc/meminfo: memFree=1455112/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=3440 CPUtime=0
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 255 0 0 0 0 0 0 0 18 0 1 0 158427514 3522560 238 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134599096 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 860 239 90 232 0 625 0

[startup+10.003 s]
/proc/loadavg: 0.87 0.98 0.99 2/64 8716
/proc/meminfo: memFree=1389128/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=74980 CPUtime=9.99
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 22891 0 0 0 987 12 0 0 25 0 1 0 158427514 76779520 16663 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134630277 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 18745 16663 100 232 0 18510 0
Current children cumulated CPU time (s) 9.99
Current children cumulated vsize (Kb) 74980

[startup+20.0103 s]
/proc/loadavg: 0.89 0.98 0.99 2/64 8716
/proc/meminfo: memFree=1363976/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=137544 CPUtime=19.99
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 35448 0 0 0 1965 34 0 0 25 0 1 0 158427514 140845056 23024 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134617144 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 34386 23024 108 232 0 34151 0
Current children cumulated CPU time (s) 19.99
Current children cumulated vsize (Kb) 137544

[startup+30.0166 s]
/proc/loadavg: 0.91 0.98 0.99 2/64 8716
/proc/meminfo: memFree=1361480/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=138396 CPUtime=29.98
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 36093 0 0 0 2954 44 0 0 25 0 1 0 158427514 141717504 23669 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134546605 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 34599 23669 108 232 0 34364 0
Current children cumulated CPU time (s) 29.98
Current children cumulated vsize (Kb) 138396

[startup+40.023 s]
/proc/loadavg: 0.92 0.98 0.99 2/64 8716
/proc/meminfo: memFree=1359112/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=138796 CPUtime=39.99
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 36765 0 0 0 3941 58 0 0 25 0 1 0 158427514 142127104 24255 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134546536 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 34699 24255 108 232 0 34464 0
Current children cumulated CPU time (s) 39.99
Current children cumulated vsize (Kb) 138796

[startup+50.0293 s]
/proc/loadavg: 0.93 0.98 0.99 2/64 8716
/proc/meminfo: memFree=1357000/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=139184 CPUtime=49.99
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 37379 0 0 0 4930 69 0 0 25 0 1 0 158427514 142524416 24783 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 34796 24783 108 232 0 34561 0
Current children cumulated CPU time (s) 49.99
Current children cumulated vsize (Kb) 139184

[startup+60.0357 s]
/proc/loadavg: 0.94 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1355528/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=139320 CPUtime=60
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 37812 0 0 0 5919 81 0 0 25 0 1 0 158427514 142663680 25087 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 34830 25087 108 232 0 34595 0
Current children cumulated CPU time (s) 60
Current children cumulated vsize (Kb) 139320

[startup+70.043 s]
/proc/loadavg: 0.95 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1355272/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=139596 CPUtime=70
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 38026 0 0 0 6906 94 0 0 25 0 1 0 158427514 142946304 25172 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 34899 25172 108 232 0 34664 0
Current children cumulated CPU time (s) 70
Current children cumulated vsize (Kb) 139596

[startup+80.0493 s]
/proc/loadavg: 0.96 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1354824/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=140000 CPUtime=80.01
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 38288 0 0 0 7897 104 0 0 25 0 1 0 158427514 143360000 25305 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134617144 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35000 25305 108 232 0 34765 0
Current children cumulated CPU time (s) 80.01
Current children cumulated vsize (Kb) 140000

[startup+90.0557 s]
/proc/loadavg: 0.96 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1353096/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=140280 CPUtime=90.01
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 38806 0 0 0 8887 114 0 0 25 0 1 0 158427514 143646720 25737 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552208 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35070 25737 108 232 0 34835 0
Current children cumulated CPU time (s) 90.01
Current children cumulated vsize (Kb) 140280

[startup+100.062 s]
/proc/loadavg: 0.97 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1352648/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=140708 CPUtime=100.01
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 39055 0 0 0 9876 125 0 0 25 0 1 0 158427514 144084992 25857 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552002 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35177 25857 108 232 0 34942 0
Current children cumulated CPU time (s) 100.01
Current children cumulated vsize (Kb) 140708

[startup+110.068 s]
/proc/loadavg: 0.97 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1352328/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=140840 CPUtime=110.02
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 39210 0 0 0 10869 133 0 0 25 0 1 0 158427514 144220160 25883 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35210 25883 108 232 0 34975 0
Current children cumulated CPU time (s) 110.02
Current children cumulated vsize (Kb) 140840

[startup+120.075 s]
/proc/loadavg: 0.98 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1352200/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=140840 CPUtime=120.01
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 39332 0 0 0 11859 142 0 0 25 0 1 0 158427514 144220160 25919 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35210 25919 108 232 0 34975 0
Current children cumulated CPU time (s) 120.01
Current children cumulated vsize (Kb) 140840

[startup+130.081 s]
/proc/loadavg: 0.98 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1351368/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=140960 CPUtime=130.02
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 39755 0 0 0 12849 153 0 0 25 0 1 0 158427514 144343040 26170 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134558830 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35240 26170 108 232 0 35005 0
Current children cumulated CPU time (s) 130.02
Current children cumulated vsize (Kb) 140960

[startup+140.087 s]
/proc/loadavg: 0.98 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1349128/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=141372 CPUtime=140.03
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 40433 0 0 0 13839 164 0 0 25 0 1 0 158427514 144764928 26719 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35343 26719 108 232 0 35108 0
Current children cumulated CPU time (s) 140.03
Current children cumulated vsize (Kb) 141372

[startup+150.094 s]
/proc/loadavg: 0.98 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1348872/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=141372 CPUtime=150.03
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 40596 0 0 0 14829 174 0 0 25 0 1 0 158427514 144764928 26753 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35343 26753 108 232 0 35108 0
Current children cumulated CPU time (s) 150.03
Current children cumulated vsize (Kb) 141372

[startup+160.1 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1348744/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=141496 CPUtime=160.03
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 40713 0 0 0 15819 184 0 0 25 0 1 0 158427514 144891904 26784 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35374 26784 108 232 0 35139 0
Current children cumulated CPU time (s) 160.03
Current children cumulated vsize (Kb) 141496

[startup+170.106 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1348424/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=141496 CPUtime=170.03
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 40926 0 0 0 16812 191 0 0 25 0 1 0 158427514 144891904 26868 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35374 26868 108 232 0 35139 0
Current children cumulated CPU time (s) 170.03
Current children cumulated vsize (Kb) 141496

[startup+180.113 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1347592/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=141796 CPUtime=180.04
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 41233 0 0 0 17801 203 0 0 25 0 1 0 158427514 145199104 27089 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35449 27089 108 232 0 35214 0
Current children cumulated CPU time (s) 180.04
Current children cumulated vsize (Kb) 141796

[startup+190.119 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1346632/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=142068 CPUtime=190.05
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 41584 0 0 0 18792 213 0 0 25 0 1 0 158427514 145477632 27354 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35517 27354 108 232 0 35282 0
Current children cumulated CPU time (s) 190.05
Current children cumulated vsize (Kb) 142068

[startup+200.125 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 8718
/proc/meminfo: memFree=1344840/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=142068 CPUtime=200.04
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 42068 0 0 0 19783 221 0 0 25 0 1 0 158427514 145477632 27752 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 35517 27752 108 232 0 35282 0
Current children cumulated CPU time (s) 200.04
Current children cumulated vsize (Kb) 142068

[startup+210.132 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 8718

################
# More data... #
################

/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61069 0 0 0 177090 1063 0 0 25 0 1 0 158427514 219242496 37723 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37723 108 232 0 53291 0
Current children cumulated CPU time (s) 1781.53
Current children cumulated vsize (Kb) 214104

[startup+1783.15 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1782.53
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61070 0 0 0 177190 1063 0 0 25 0 1 0 158427514 219242496 37724 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134550051 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37724 108 232 0 53291 0
Current children cumulated CPU time (s) 1782.53
Current children cumulated vsize (Kb) 214104

[startup+1784.15 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1783.54
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61113 0 0 0 177290 1064 0 0 25 0 1 0 158427514 219242496 37724 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37724 108 232 0 53291 0
Current children cumulated CPU time (s) 1783.54
Current children cumulated vsize (Kb) 214104

[startup+1785.16 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1784.54
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61114 0 0 0 177390 1064 0 0 25 0 1 0 158427514 219242496 37725 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37725 108 232 0 53291 0
Current children cumulated CPU time (s) 1784.54
Current children cumulated vsize (Kb) 214104

[startup+1786.17 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1785.55
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61114 0 0 0 177490 1065 0 0 25 0 1 0 158427514 219242496 37725 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551990 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37725 108 232 0 53291 0
Current children cumulated CPU time (s) 1785.55
Current children cumulated vsize (Kb) 214104

[startup+1787.17 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1786.55
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61115 0 0 0 177590 1065 0 0 25 0 1 0 158427514 219242496 37726 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552208 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37726 108 232 0 53291 0
Current children cumulated CPU time (s) 1786.55
Current children cumulated vsize (Kb) 214104

[startup+1788.18 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1787.56
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61115 0 0 0 177690 1066 0 0 25 0 1 0 158427514 219242496 37726 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134558866 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37726 108 232 0 53291 0
Current children cumulated CPU time (s) 1787.56
Current children cumulated vsize (Kb) 214104

[startup+1789.18 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1788.57
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61117 0 0 0 177791 1066 0 0 25 0 1 0 158427514 219242496 37728 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37728 108 232 0 53291 0
Current children cumulated CPU time (s) 1788.57
Current children cumulated vsize (Kb) 214104

[startup+1790.19 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1789.57
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61118 0 0 0 177891 1066 0 0 25 0 1 0 158427514 219242496 37729 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551987 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37729 108 232 0 53291 0
Current children cumulated CPU time (s) 1789.57
Current children cumulated vsize (Kb) 214104

[startup+1791.19 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1790.58
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61118 0 0 0 177991 1067 0 0 25 0 1 0 158427514 219242496 37729 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37729 108 232 0 53291 0
Current children cumulated CPU time (s) 1790.58
Current children cumulated vsize (Kb) 214104

[startup+1792.19 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1791.58
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61119 0 0 0 178091 1067 0 0 25 0 1 0 158427514 219242496 37730 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37730 108 232 0 53291 0
Current children cumulated CPU time (s) 1791.58
Current children cumulated vsize (Kb) 214104

[startup+1793.2 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1792.58
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61119 0 0 0 178191 1067 0 0 25 0 1 0 158427514 219242496 37730 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37730 108 232 0 53291 0
Current children cumulated CPU time (s) 1792.58
Current children cumulated vsize (Kb) 214104

[startup+1794.21 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1793.59
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61120 0 0 0 178291 1068 0 0 25 0 1 0 158427514 219242496 37731 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551987 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37731 108 232 0 53291 0
Current children cumulated CPU time (s) 1793.59
Current children cumulated vsize (Kb) 214104

[startup+1795.21 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1794.59
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61120 0 0 0 178391 1068 0 0 25 0 1 0 158427514 219242496 37731 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37731 108 232 0 53291 0
Current children cumulated CPU time (s) 1794.59
Current children cumulated vsize (Kb) 214104

[startup+1796.22 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1795.6
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61121 0 0 0 178491 1069 0 0 25 0 1 0 158427514 219242496 37732 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552208 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37732 108 232 0 53291 0
Current children cumulated CPU time (s) 1795.6
Current children cumulated vsize (Kb) 214104

[startup+1797.22 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304584/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1796.6
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61121 0 0 0 178591 1069 0 0 25 0 1 0 158427514 219242496 37732 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37732 108 232 0 53291 0
Current children cumulated CPU time (s) 1796.6
Current children cumulated vsize (Kb) 214104

[startup+1798.23 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304520/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1797.61
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61173 0 0 0 178691 1070 0 0 25 0 1 0 158427514 219242496 37741 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37741 108 232 0 53291 0
Current children cumulated CPU time (s) 1797.61
Current children cumulated vsize (Kb) 214104

[startup+1799.23 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304520/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1798.61
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61175 0 0 0 178791 1070 0 0 25 0 1 0 158427514 219242496 37743 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37743 108 232 0 53291 0
Current children cumulated CPU time (s) 1798.61
Current children cumulated vsize (Kb) 214104

[startup+1800.24 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304520/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1799.62
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61176 0 0 0 178891 1071 0 0 25 0 1 0 158427514 219242496 37744 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37744 108 232 0 53291 0
Current children cumulated CPU time (s) 1799.62
Current children cumulated vsize (Kb) 214104

[startup+1801.24 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304520/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1800.62
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61176 0 0 0 178991 1071 0 0 25 0 1 0 158427514 219242496 37744 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37744 108 232 0 53291 0
Current children cumulated CPU time (s) 1800.62
Current children cumulated vsize (Kb) 214104



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.24 s]
/proc/loadavg: 1.00 1.00 0.99 2/64 8916
/proc/meminfo: memFree=1304520/2055920 swapFree=4183264/4192956
[pid=8716] ppid=8714 vsize=214104 CPUtime=1800.62
/proc/8716/stat : 8716 (PBS4L) R 8714 8716 8667 0 -1 4194304 61176 0 0 0 178991 1071 0 0 25 0 1 0 158427514 219242496 37744 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/8716/statm: 53526 37744 108 232 0 53291 0
Current children cumulated CPU time (s) 1800.62
Current children cumulated vsize (Kb) 214104

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.28
CPU time (s): 1800.66
CPU user time (s): 1789.92
CPU system time (s): 10.7434
CPU usage (%): 99.9658
Max. virtual memory (cumulated for all children) (Kb): 214104
The end

Launcher Data (download as text)

Begin job on node13 on Fri Jul 28 19:41:06 UTC 2006


FILE ID= 50580-1154115665

PBS_JOBID= 886710

BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.07.opb
COMMAND LINE= ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node13/50580-1154115665/instance-50580-1154115665.opb 410282567
RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node13/watcher-50580-1154115665 -o ROOT/results/node13/solver-50580-1154115665 -C 1800 -M 1800 -S 64  ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node13/50580-1154115665/instance-50580-1154115665.opb 410282567

MD5SUM SOLVER= ab46593c31a6a47b9d9920387a00d332
MD5SUM BENCH=  7a51facc2b0ceeb02915874508a30079

RANDOM SEED= 410282567

TIMEOUT= 1800 seconds


/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.240
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.240
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1455512 kB
Buffers:         35876 kB
Cached:         487704 kB
SwapCached:       3352 kB
Active:          89112 kB
Inactive:       442928 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1455512 kB
SwapTotal:     4192956 kB
SwapFree:      4183264 kB
Dirty:             192 kB
Writeback:           0 kB
Mapped:          14476 kB
Slab:            54408 kB
Committed_AS:   634416 kB
PageTables:       1488 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB


End job on node13 on Fri Jul 28 20:11:07 UTC 2006