Trace number 50577

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds, and are wall clock time (not CPU time).

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerObjective functionCPU timeWall clock time
PBS 4.1L? (TO) 1800.56 1801.22

General information on the benchmark

Namenormalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/
haplotype/normalized-simp-nonunif-100_100.10.opb
MD5SUMf304ba5324add428c73c7022630c48ee
Bench CategoryOPT-SMALLINT (optimisation, small integers)
Best result obtained on this benchmarkOPT
Best value of the objective obtained on this benchmark49
Best CPU time to get the best result obtained on this benchmark193.504
Has Objective FunctionYES
SatisfiableYES
(Un)Satisfiability was provedYES
Best value of the objective function 49
Optimality of the best value was proved YES
Number of variables27027
Total number of constraints1883063
Number of constraints which are clauses1877876
Number of constraints which are cardinality constraints (but not clauses)5187
Number of constraints which are nor clauses,nor cardinality constraints0
Minimum length of a constraint1
Maximum length of a constraint182
Number of terms in the objective function 182
Biggest coefficient in the objective function 1
Number of bits for the biggest coefficient in the objective function 1
Sum of the numbers in the objective function 182
Number of bits of the sum of numbers in the objective function 8
Biggest number in a constraint 180
Number of bits of the biggest number in a constraint 8
Biggest sum of numbers in a constraint 362
Number of bits of the biggest sum of numbers9
Number of products (including duplicates)0
Sum of products size (including duplicates)0
Number of different products0
Sum of products size0

Solver Data (download as text)

0.00	c PBS v4 by Bashar Al-Rawi & Fadi Aloul
0.00	c Solving ROOT/tmp/node7/50577-1154114995/instance-50577-1154114995.opb ......
22.02	c done parsing opb.
22.02	o 182
22.05	o 181
22.08	o 180
22.10	o 179
22.13	o 178
22.16	o 177
22.19	o 176
22.21	o 175
22.24	o 174
22.27	o 173
22.29	o 172
22.32	o 171
22.35	o 170
22.37	o 169
22.40	o 168
22.43	o 167
22.46	o 166
22.48	o 165
22.51	o 164
22.54	o 163
22.56	o 162
22.59	o 161
22.62	o 160
22.65	o 159
22.67	o 158
22.70	o 157
22.73	o 156
22.75	o 155
22.78	o 154
22.81	o 153
22.84	o 152
22.86	o 151
22.89	o 150
22.92	o 149
22.94	o 148
22.97	o 147
23.00	o 146
23.03	o 145
23.05	o 144
23.08	o 143
23.11	o 142
23.14	o 141
23.16	o 140
23.19	o 139
23.22	o 138
23.25	o 137
23.27	o 136
23.30	o 135
23.33	o 134
23.36	o 133
23.38	o 132
23.41	o 131
23.44	o 130
23.47	o 129
23.49	o 128
23.52	o 127
23.55	o 126
23.57	o 125
23.60	o 124
23.63	o 123
23.66	o 122
23.68	o 121
23.71	o 120
23.74	o 119
23.77	o 118
23.79	o 117
23.82	o 116
23.85	o 115
23.88	o 114
23.90	o 113
23.93	o 112
23.96	o 111
23.99	o 110
24.01	o 109
24.04	o 108
24.07	o 107
24.10	o 106
24.12	o 105
24.15	o 104
24.18	o 103
24.21	o 102
24.23	o 101
24.26	o 100
24.29	o 99
24.32	o 98
24.35	o 97
24.47	o 96
27.82	o 95
28.21	o 94
28.53	o 93
29.10	o 92
29.62	o 91
29.67	o 90
29.85	o 89
30.86	o 88
32.04	o 87
34.04	o 86
47.48	o 85
48.16	o 84
289.51	o 83
322.71	o 82
607.06	o 81
608.27	o 80
803.03	o 79
969.55	o 78
1135.56	o 77
1142.44	o 76
1190.57	o 75

Verifier Data (download as text)

ERROR: no interpretation found !

Watcher Data (download as text)

Enforcing CPU limit (will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime (will send SIGXCPU) limit: 1830 seconds
Enforcing Stack size limit: 67108864 bytes

runsolver version 3.0.3 (c) roussel@cril.univ-artois.fr

Enforcing memory limit (will send SIGKILL): 1843200 Kb
Enforcing VSIZE limit: 1887436800 bytes
command line: runsolver --timestamp -w ROOT/results/node7/watcher-50577-1154114995 -o ROOT/results/node7/solver-50577-1154114995 -C 1800 -M 1800 -S 64 ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node7/50577-1154114995/instance-50577-1154114995.opb 749973082 

Current StackSize limit: 67108864 bytes

/proc/loadavg: 0.92 0.98 0.99 3/64 5160
/proc/meminfo: memFree=1311472/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=3936 CPUtime=0
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 225 0 0 0 0 0 0 0 18 0 1 0 158361180 4030464 208 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134599096 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 984 210 90 232 0 749 0

[startup+10.003 s]
/proc/loadavg: 0.93 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1250104/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=72504 CPUtime=9.99
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 21857 0 0 0 988 11 0 0 25 0 1 0 158361180 74244096 15500 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135098092 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 18126 15500 100 232 0 17891 0
Current children cumulated CPU time (s) 9.99
Current children cumulated vsize (Kb) 72504

[startup+20.0099 s]
/proc/loadavg: 0.94 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1193336/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=140464 CPUtime=19.99
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 42213 0 0 0 1979 20 0 0 25 0 1 0 158361180 143835136 29711 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134565904 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 35116 29711 100 232 0 34881 0
Current children cumulated CPU time (s) 19.99
Current children cumulated vsize (Kb) 140464

[startup+30.0167 s]
/proc/loadavg: 0.95 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1181240/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=143300 CPUtime=29.99
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 45299 0 0 0 2958 41 0 0 25 0 1 0 158361180 146739200 32736 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 35825 32736 108 232 0 35590 0
Current children cumulated CPU time (s) 29.99
Current children cumulated vsize (Kb) 143300

[startup+40.0226 s]
/proc/loadavg: 0.96 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1180024/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=143564 CPUtime=39.99
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 45601 0 0 0 3951 48 0 0 25 0 1 0 158361180 147009536 33038 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 35891 33038 108 232 0 35656 0
Current children cumulated CPU time (s) 39.99
Current children cumulated vsize (Kb) 143564

[startup+50.0294 s]
/proc/loadavg: 0.97 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1178680/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=143988 CPUtime=50
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 45931 0 0 0 4945 55 0 0 25 0 1 0 158361180 147443712 33368 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 35997 33368 108 232 0 35762 0
Current children cumulated CPU time (s) 50
Current children cumulated vsize (Kb) 143988

[startup+60.0353 s]
/proc/loadavg: 0.97 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1177080/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=144384 CPUtime=60
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 46437 0 0 0 5935 65 0 0 25 0 1 0 158361180 147849216 33768 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 36096 33768 108 232 0 35861 0
Current children cumulated CPU time (s) 60
Current children cumulated vsize (Kb) 144384

[startup+70.0421 s]
/proc/loadavg: 0.97 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1176376/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=144784 CPUtime=70
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 46663 0 0 0 6925 75 0 0 25 0 1 0 158361180 148258816 33941 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 36196 33941 108 232 0 35961 0
Current children cumulated CPU time (s) 70
Current children cumulated vsize (Kb) 144784

[startup+80.048 s]
/proc/loadavg: 0.98 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1175096/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=144916 CPUtime=80.01
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 46987 0 0 0 7919 82 0 0 25 0 1 0 158361180 148393984 34265 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 36229 34265 108 232 0 35994 0
Current children cumulated CPU time (s) 80.01
Current children cumulated vsize (Kb) 144916

[startup+90.0538 s]
/proc/loadavg: 0.98 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1173304/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=145216 CPUtime=90
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 47513 0 0 0 8908 92 0 0 25 0 1 0 158361180 148701184 34685 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 36304 34685 108 232 0 36069 0
Current children cumulated CPU time (s) 90
Current children cumulated vsize (Kb) 145216

[startup+100.06 s]
/proc/loadavg: 0.98 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1171320/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=211020 CPUtime=100.01
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 48084 0 0 0 9901 100 0 0 25 0 1 0 158361180 216084480 35204 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134617144 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 52755 35204 108 232 0 52520 0
Current children cumulated CPU time (s) 100.01
Current children cumulated vsize (Kb) 211020

[startup+110.066 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1170360/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=211428 CPUtime=110.01
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 48424 0 0 0 10889 112 0 0 25 0 1 0 158361180 216502272 35437 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551979 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 52857 35437 108 232 0 52622 0
Current children cumulated CPU time (s) 110.01
Current children cumulated vsize (Kb) 211428

[startup+120.071 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1169848/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=211828 CPUtime=120.01
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 48702 0 0 0 11880 121 0 0 25 0 1 0 158361180 216911872 35556 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 52957 35556 108 232 0 52722 0
Current children cumulated CPU time (s) 120.01
Current children cumulated vsize (Kb) 211828

[startup+130.077 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1169464/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=212140 CPUtime=130.02
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 48919 0 0 0 12873 129 0 0 25 0 1 0 158361180 217231360 35614 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 53035 35614 108 232 0 52800 0
Current children cumulated CPU time (s) 130.02
Current children cumulated vsize (Kb) 212140

[startup+140.083 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1168440/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=212408 CPUtime=140.02
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 49332 0 0 0 13864 138 0 0 25 0 1 0 158361180 217505792 35921 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 53102 35921 108 232 0 52867 0
Current children cumulated CPU time (s) 140.02
Current children cumulated vsize (Kb) 212408

[startup+150.089 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1166776/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=212408 CPUtime=150.02
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 49755 0 0 0 14858 144 0 0 25 0 1 0 158361180 217505792 36291 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 53102 36291 108 232 0 52867 0
Current children cumulated CPU time (s) 150.02
Current children cumulated vsize (Kb) 212408

[startup+160.095 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1166648/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=212532 CPUtime=160.02
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 49903 0 0 0 15850 152 0 0 25 0 1 0 158361180 217632768 36333 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 53133 36333 108 232 0 52898 0
Current children cumulated CPU time (s) 160.02
Current children cumulated vsize (Kb) 212532

[startup+170.101 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1166456/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=212656 CPUtime=170.03
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 50085 0 0 0 16843 160 0 0 25 0 1 0 158361180 217759744 36409 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 53164 36409 108 232 0 52929 0
Current children cumulated CPU time (s) 170.03
Current children cumulated vsize (Kb) 212656

[startup+180.107 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1164664/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=212788 CPUtime=180.02
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 50556 0 0 0 17835 167 0 0 25 0 1 0 158361180 217894912 36827 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 53197 36827 108 232 0 52962 0
Current children cumulated CPU time (s) 180.02
Current children cumulated vsize (Kb) 212788

[startup+190.112 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1164472/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=213068 CPUtime=190.03
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 50726 0 0 0 18826 177 0 0 25 0 1 0 158361180 218181632 36891 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 53267 36891 108 232 0 53032 0
Current children cumulated CPU time (s) 190.03
Current children cumulated vsize (Kb) 213068

[startup+200.118 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160
/proc/meminfo: memFree=1164280/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=213256 CPUtime=200.04
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 50868 0 0 0 19818 186 0 0 25 0 1 0 158361180 218374144 36927 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 53314 36927 108 232 0 53079 0
Current children cumulated CPU time (s) 200.04
Current children cumulated vsize (Kb) 213256

[startup+210.124 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5160

################
# More data... #
################

/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73166 0 0 0 177195 946 0 0 25 0 1 0 158361180 225927168 48678 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48678 108 232 0 54923 0
Current children cumulated CPU time (s) 1781.41
Current children cumulated vsize (Kb) 220632

[startup+1783.08 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116984/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1782.43
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73166 0 0 0 177296 947 0 0 25 0 1 0 158361180 225927168 48678 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48678 108 232 0 54923 0
Current children cumulated CPU time (s) 1782.43
Current children cumulated vsize (Kb) 220632

[startup+1784.09 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116984/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1783.43
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73168 0 0 0 177396 947 0 0 25 0 1 0 158361180 225927168 48680 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552085 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48680 108 232 0 54923 0
Current children cumulated CPU time (s) 1783.43
Current children cumulated vsize (Kb) 220632

[startup+1785.09 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116984/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1784.43
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73169 0 0 0 177495 948 0 0 25 0 1 0 158361180 225927168 48681 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48681 108 232 0 54923 0
Current children cumulated CPU time (s) 1784.43
Current children cumulated vsize (Kb) 220632

[startup+1786.1 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116984/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1785.44
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73172 0 0 0 177596 948 0 0 25 0 1 0 158361180 225927168 48684 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48684 108 232 0 54923 0
Current children cumulated CPU time (s) 1785.44
Current children cumulated vsize (Kb) 220632

[startup+1787.1 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116984/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1786.44
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73172 0 0 0 177696 948 0 0 25 0 1 0 158361180 225927168 48684 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552187 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48684 108 232 0 54923 0
Current children cumulated CPU time (s) 1786.44
Current children cumulated vsize (Kb) 220632

[startup+1788.11 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116984/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1787.44
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73173 0 0 0 177796 948 0 0 25 0 1 0 158361180 225927168 48685 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134550014 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48685 108 232 0 54923 0
Current children cumulated CPU time (s) 1787.44
Current children cumulated vsize (Kb) 220632

[startup+1789.11 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1788.45
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73227 0 0 0 177896 949 0 0 25 0 1 0 158361180 225927168 48686 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48686 108 232 0 54923 0
Current children cumulated CPU time (s) 1788.45
Current children cumulated vsize (Kb) 220632

[startup+1790.12 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1789.46
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73227 0 0 0 177996 950 0 0 25 0 1 0 158361180 225927168 48686 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48686 108 232 0 54923 0
Current children cumulated CPU time (s) 1789.46
Current children cumulated vsize (Kb) 220632

[startup+1791.12 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1790.46
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73227 0 0 0 178096 950 0 0 25 0 1 0 158361180 225927168 48686 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48686 108 232 0 54923 0
Current children cumulated CPU time (s) 1790.46
Current children cumulated vsize (Kb) 220632

[startup+1792.13 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1791.47
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73228 0 0 0 178197 950 0 0 25 0 1 0 158361180 225927168 48687 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134546597 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48687 108 232 0 54923 0
Current children cumulated CPU time (s) 1791.47
Current children cumulated vsize (Kb) 220632

[startup+1793.13 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1792.47
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73230 0 0 0 178297 950 0 0 25 0 1 0 158361180 225927168 48689 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552085 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48689 108 232 0 54923 0
Current children cumulated CPU time (s) 1792.47
Current children cumulated vsize (Kb) 220632

[startup+1794.14 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1793.48
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73230 0 0 0 178397 951 0 0 25 0 1 0 158361180 225927168 48689 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48689 108 232 0 54923 0
Current children cumulated CPU time (s) 1793.48
Current children cumulated vsize (Kb) 220632

[startup+1795.14 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220632 CPUtime=1794.48
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73231 0 0 0 178497 951 0 0 25 0 1 0 158361180 225927168 48690 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55158 48690 108 232 0 54923 0
Current children cumulated CPU time (s) 1794.48
Current children cumulated vsize (Kb) 220632

[startup+1796.15 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220764 CPUtime=1795.49
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73233 0 0 0 178597 952 0 0 25 0 1 0 158361180 226062336 48692 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552496 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55191 48692 108 232 0 54956 0
Current children cumulated CPU time (s) 1795.49
Current children cumulated vsize (Kb) 220764

[startup+1797.15 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220764 CPUtime=1796.49
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73234 0 0 0 178697 952 0 0 25 0 1 0 158361180 226062336 48693 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134551995 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55191 48693 108 232 0 54956 0
Current children cumulated CPU time (s) 1796.49
Current children cumulated vsize (Kb) 220764

[startup+1798.16 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116920/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220764 CPUtime=1797.49
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73236 0 0 0 178797 952 0 0 25 0 1 0 158361180 226062336 48695 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 134552085 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55191 48695 108 232 0 54956 0
Current children cumulated CPU time (s) 1797.49
Current children cumulated vsize (Kb) 220764

[startup+1799.16 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116856/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220764 CPUtime=1798.5
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73289 0 0 0 178897 953 0 0 25 0 1 0 158361180 226062336 48695 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55191 48695 108 232 0 54956 0
Current children cumulated CPU time (s) 1798.5
Current children cumulated vsize (Kb) 220764

[startup+1800.17 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116856/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220764 CPUtime=1799.5
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73289 0 0 0 178997 953 0 0 25 0 1 0 158361180 226062336 48695 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55191 48695 108 232 0 54956 0
Current children cumulated CPU time (s) 1799.5
Current children cumulated vsize (Kb) 220764

[startup+1801.17 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116856/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220764 CPUtime=1800.51
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73289 0 0 0 179097 954 0 0 25 0 1 0 158361180 226062336 48695 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55191 48695 108 232 0 54956 0
Current children cumulated CPU time (s) 1800.51
Current children cumulated vsize (Kb) 220764



Maximum CPU time exceeded: sending SIGTERM then SIGKILL

[startup+1801.18 s]
/proc/loadavg: 0.99 0.98 0.99 2/64 5162
/proc/meminfo: memFree=1116856/2055920 swapFree=4182852/4192956
[pid=5160] ppid=5158 vsize=220764 CPUtime=1800.51
/proc/5160/stat : 5160 (PBS4L) R 5158 5160 5111 0 -1 4194304 73289 0 0 0 179097 954 0 0 25 0 1 0 158361180 226062336 48695 18446744073709551615 134512640 135466232 4294956672 18446744073709551615 135140097 0 0 4096 0 0 0 0 17 1 0 0
/proc/5160/statm: 55191 48695 108 232 0 54956 0
Current children cumulated CPU time (s) 1800.51
Current children cumulated vsize (Kb) 220764

Sending SIGTERM to process tree (bottom up)
Sleeping 2 seconds

Child ended because it received signal 15 (SIGTERM)
Real time (s): 1801.22
CPU time (s): 1800.56
CPU user time (s): 1790.98
CPU system time (s): 9.57454
CPU usage (%): 99.9633
Max. virtual memory (cumulated for all children) (Kb): 220764
The end

Launcher Data (download as text)

Begin job on node7 on Fri Jul 28 19:29:57 UTC 2006


FILE ID= 50577-1154114995

PBS_JOBID= 886671

BENCH NAME= HOME/pub/bench/PB06/final/normalized-PB06/OPT-SMALLINT/submitted-PB06/manquiho/haplotype/normalized-simp-nonunif-100_100.10.opb
COMMAND LINE= ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node7/50577-1154114995/instance-50577-1154114995.opb 749973082
RUNSOLVER COMMAND LINE= runsolver  --timestamp  -w ROOT/results/node7/watcher-50577-1154114995 -o ROOT/results/node7/solver-50577-1154114995 -C 1800 -M 1800 -S 64  ROOT/solvers/PB/PB06final/user11/PBS4L ROOT/tmp/node7/50577-1154114995/instance-50577-1154114995.opb 749973082

MD5SUM SOLVER= ab46593c31a6a47b9d9920387a00d332
MD5SUM BENCH=  f304ba5324add428c73c7022630c48ee

RANDOM SEED= 749973082

TIMEOUT= 1800 seconds


/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.281
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.281
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1311680 kB
Buffers:         35276 kB
Cached:         632080 kB
SwapCached:       4484 kB
Active:         108952 kB
Inactive:       567772 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1311680 kB
SwapTotal:     4192956 kB
SwapFree:      4182852 kB
Dirty:             160 kB
Writeback:           0 kB
Mapped:          14488 kB
Slab:            53456 kB
Committed_AS:   721192 kB
PageTables:       1476 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB


End job on node7 on Fri Jul 28 19:59:59 UTC 2006