0.19/0.20 c [ This is CaSPERzito (C) mvc@di.fct.unl.pt ]
0.19/0.20 c Parsing = 1
0.19/0.20 c Building = 1
0.19/0.20 c [ NumberOfVariables = 286 ]
0.19/0.20 c [ NumberOfConstraints = 309 ]
0.19/0.20 c [ SizeOfSearchSpace(log2) = 866.557 ]
0.19/0.20 c SymmetrySearch = 1
0.19/0.20 c [ Found 1.49299e+06 symmetries ]
0.19/0.20 c InitialPropagation = 1
0.19/0.20 c [ SizeOfSearchSpace(log2) = 866.468 ]
0.19/0.20 c InitialSAC = terminate called after throwing an instance of 'std::bad_alloc'
3.47/3.58 what(): std::bad_alloc
runsolver version 3.2.5 (c) roussel@cril.univ-artois.fr
command line: /home/evaluation/evaluation/pub/bin/runsolver --timestamp -w /tmp/evaluation-result-1055524-1215059705/watcher-1055524-1215059705 -o /tmp/evaluation-result-1055524-1215059705/solver-1055524-1215059705 -C 1800 -W 2200 -M 900 --output-limit 1,15 HOME/casperzito HOME/instance-1055524-1215059705.xml 1985897695
Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1830 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 2200 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 921600 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 972800 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB
[startup+0 s]
/proc/loadavg: 2.10 2.16 2.07 4/81 13743
/proc/meminfo: memFree=1352608/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=1052 CPUtime=0
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4194304 40 0 0 0 0 0 0 0 19 0 1 0 1984945643 1077248 26 996147200 134512640 135472138 4294956224 18446744073709551615 10416932 0 2147483391 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 263 26 20 234 0 3 0
[startup+0.0678619 s]
/proc/loadavg: 2.10 2.16 2.07 4/81 13743
/proc/meminfo: memFree=1352608/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=99592 CPUtime=0.06
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4194304 2262 0 0 0 5 1 0 0 18 0 1 0 1984945643 101982208 2222 996147200 134512640 135472138 4294956224 18446744073709551615 135010650 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 24898 2222 501 234 0 23600 0
Current children cumulated CPU time (s) 0.06
Current children cumulated vsize (KiB) 99592
[startup+0.101862 s]
/proc/loadavg: 2.10 2.16 2.07 4/81 13743
/proc/meminfo: memFree=1352608/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=99592 CPUtime=0.09
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4194304 3889 0 0 0 8 1 0 0 18 0 1 0 1984945643 101982208 3849 996147200 134512640 135472138 4294956224 18446744073709551615 134868640 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 24898 3849 501 234 0 23600 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 99592
[startup+0.301886 s]
/proc/loadavg: 2.10 2.16 2.07 4/81 13743
/proc/meminfo: memFree=1352608/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=162096 CPUtime=0.29
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4194304 9120 0 0 0 26 3 0 0 19 0 1 0 1984945643 165986304 9080 996147200 134512640 135472138 4294956224 18446744073709551615 135011120 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 40524 9080 501 234 0 39226 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 162096
[startup+0.701923 s]
/proc/loadavg: 2.10 2.16 2.07 4/81 13743
/proc/meminfo: memFree=1352608/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=162096 CPUtime=0.68
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4194304 18059 0 0 0 62 6 0 0 23 0 1 0 1984945643 165986304 18019 996147200 134512640 135472138 4294956224 18446744073709551615 134965403 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 40524 18019 501 234 0 39226 0
Current children cumulated CPU time (s) 0.68
Current children cumulated vsize (KiB) 162096
[startup+1.50201 s]
/proc/loadavg: 2.10 2.16 2.07 3/82 13744
/proc/meminfo: memFree=1249880/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=287100 CPUtime=1.48
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4194304 37531 0 0 0 134 14 0 0 25 0 1 0 1984945643 293990400 37491 996147200 134512640 135472138 4294956224 18446744073709551615 134965397 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 71775 37491 501 234 0 70477 0
Current children cumulated CPU time (s) 1.48
Current children cumulated vsize (KiB) 287100
[startup+3.10118 s]
/proc/loadavg: 2.09 2.16 2.07 3/82 13744
/proc/meminfo: memFree=1116184/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=537104 CPUtime=3.08
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4194304 98261 0 0 0 267 41 0 0 25 0 1 0 1984945643 549994496 98221 996147200 134512640 135472138 4294956224 18446744073709551615 134916454 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 134276 98221 501 234 0 132978 0
Current children cumulated CPU time (s) 3.08
Current children cumulated vsize (KiB) 537104
Solver just ended. Dumping a history of the last processes samples
[startup+4.70135 s]
/proc/loadavg: 2.09 2.16 2.07 3/82 13744
/proc/meminfo: memFree=695768/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=538128 CPUtime=4.55
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4195840 117846 0 0 0 307 148 0 0 25 0 1 0 1984945643 551043072 117766 996147200 134512640 135472138 4294956224 18446744073709551615 4294960144 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 134532 117766 530 234 0 133234 0
Current children cumulated CPU time (s) 4.55
Current children cumulated vsize (KiB) 538128
[startup+5.10141 s]
/proc/loadavg: 2.09 2.16 2.07 3/82 13744
/proc/meminfo: memFree=695768/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=538128 CPUtime=4.95
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4195840 117846 0 0 0 307 188 0 0 25 0 1 0 1984945643 551043072 117766 996147200 134512640 135472138 4294956224 18446744073709551615 4294960144 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 134532 117766 530 234 0 133234 0
Current children cumulated CPU time (s) 4.95
Current children cumulated vsize (KiB) 538128
[startup+5.50644 s]
/proc/loadavg: 2.09 2.16 2.07 3/82 13744
/proc/meminfo: memFree=422232/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=538128 CPUtime=5.35
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4195840 118228 0 0 0 307 228 0 0 25 0 1 0 1984945643 551043072 117766 996147200 134512640 135472138 4294956224 18446744073709551615 4294960144 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 134532 117766 530 234 0 133234 0
Current children cumulated CPU time (s) 5.35
Current children cumulated vsize (KiB) 538128
[startup+5.60208 s]
/proc/loadavg: 2.09 2.16 2.07 3/82 13744
/proc/meminfo: memFree=422232/2055920 swapFree=4180052/4192956
[pid=13743] ppid=13741 vsize=0 CPUtime=5.45
/proc/13743/stat : 13743 (casperzito) R 13741 13743 10028 0 -1 4195844 118252 0 0 0 307 238 0 0 25 0 1 0 1984945643 0 0 996147200 0 0 0 0 0 0 0 4096 0 0 0 0 17 1 0 0
/proc/13743/statm: 0 0 0 0 0 0 0
Current children cumulated CPU time (s) 5.45
Current children cumulated vsize (KiB) 0
Child ended because it received signal 6 (SIGABRT)
Child dumped core
Real time (s): 5.62427
CPU time (s): 5.48317
CPU user time (s): 3.07853
CPU system time (s): 2.40463
CPU usage (%): 97.4912
Max. virtual memory (cumulated for all children) (KiB): 538128
getrusage(RUSAGE_CHILDREN,...) data:
user time used= 3.07853
system time used= 2.40463
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 118252
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 17
involuntary context switches= 193
runsolver used 0.013997 second user time and 0.020996 second system time
The end
Begin job on node7 at 2008-07-03 06:35:05
IDJOB=1055524
IDBENCH=56824
IDSOLVER=362
FILE ID=node7/1055524-1215059705
PBS_JOBID= 7875160
Free space on /tmp= 66552 MiB
SOLVER NAME= casper zito
BENCH NAME= CPAI08/csp/nengfa/normalized-protein.xml
COMMAND LINE= HOME/casperzito BENCHNAME RANDOMSEED
RUNSOLVER COMMAND LINE= /home/evaluation/evaluation/pub/bin/runsolver --timestamp -w /tmp/evaluation-result-1055524-1215059705/watcher-1055524-1215059705 -o /tmp/evaluation-result-1055524-1215059705/solver-1055524-1215059705 -C 1800 -W 2200 -M 900 --output-limit 1,15 HOME/casperzito HOME/instance-1055524-1215059705.xml 1985897695
TIME LIMIT= 1800 seconds
MEMORY LIMIT= 900 MiB
MD5SUM BENCH= dcc276e0be4c2cfad38640ad0b90bab6
RANDOM SEED=1985897695
node7.alineos.net Linux 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005
/proc/cpuinfo:
processor : 0
vendor_id : GenuineIntel
cpu family : 15
model : 4
model name : Intel(R) Xeon(TM) CPU 3.00GHz
stepping : 3
cpu MHz : 3000.236
cache size : 2048 KB
fpu : yes
fpu_exception : yes
cpuid level : 5
wp : yes
flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips : 5914.62
clflush size : 64
cache_alignment : 128
address sizes : 36 bits physical, 48 bits virtual
power management:
processor : 1
vendor_id : GenuineIntel
cpu family : 15
model : 4
model name : Intel(R) Xeon(TM) CPU 3.00GHz
stepping : 3
cpu MHz : 3000.236
cache size : 2048 KB
fpu : yes
fpu_exception : yes
cpuid level : 5
wp : yes
flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips : 5586.94
clflush size : 64
cache_alignment : 128
address sizes : 36 bits physical, 48 bits virtual
power management:
/proc/meminfo:
MemTotal: 2055920 kB
MemFree: 1353088 kB
Buffers: 86596 kB
Cached: 496820 kB
SwapCached: 7028 kB
Active: 236164 kB
Inactive: 385444 kB
HighTotal: 0 kB
HighFree: 0 kB
LowTotal: 2055920 kB
LowFree: 1353088 kB
SwapTotal: 4192956 kB
SwapFree: 4180052 kB
Dirty: 3344 kB
Writeback: 0 kB
Mapped: 51976 kB
Slab: 66356 kB
Committed_AS: 4092028 kB
PageTables: 1976 kB
VmallocTotal: 536870911 kB
VmallocUsed: 264952 kB
VmallocChunk: 536605679 kB
HugePages_Total: 0
HugePages_Free: 0
Hugepagesize: 2048 kB
Free space on /tmp at the end= 66092 MiB
End job on node7 at 2008-07-03 06:35:10